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Evaluation of xanthene-appended quinoline hybrids as potential leads against antimalarial drug targets. Mol Divers 2022; 27:709-727. [PMID: 35583686 DOI: 10.1007/s11030-022-10450-4] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/04/2022] [Accepted: 04/22/2022] [Indexed: 10/18/2022]
Abstract
A series of fused heterocycle xanthene-appended quinoline 6a-n was successfully synthesized with regioselectivity and characterized using IR, 1H NMR, 13C NMR, and mass spectral data. Molecular docking was performed to find the binding efficacy of all these newly synthesized compounds towards thirteen antimalarial drug targets. Molecular dynamics simulation was carried out to predict the stability of the ligand-bound complex in a solvent medium. Blind and site-directed docking with compounds 6a-n against 13 drug targets revealed most of the ligands to have a good binding affinity with the targets. Analysis on the basis of binding energy, binding modalities of the ligands, intermolecular interactions, and pharmacophore, we identified only one of the ligand-receptor complexes to provide better results. Molecular dynamic simulation of the selected receptor-ligand complex revealed that the synthesized compound had a better binding affinity with the receptor than the native ligand complex. Further analysis of the synthesized ligand in the laboratory may prove promising results in the search for potential antimalarial drugs.
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Yang QL, Zhang XY, Xiong DQ, Zhu YY, Yun M, Jia MM, Fu PK, Liu JC, Dong XY. TWO NEW SELF-ASSEMBLED CADMIUM(II) METAL-ORGANIC FRAMEWORKS CONSTRUCTED OF A FLEXIBLE TRIPODAL LIGAND: SYNTHESIS, STRUCTURE, AND THERMAL STABILITY. J STRUCT CHEM+ 2021. [DOI: 10.1134/s0022476621110068] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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3
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Gudi Y, Mangali MS, Gundala S, Venkatapuram P, Adivireddy P. Synthesis, characterization, and bioassay of a new class of pyrazolyl/isoxazolyl oxadiazoles. MONATSHEFTE FUR CHEMIE 2018. [DOI: 10.1007/s00706-018-2295-7] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/30/2023]
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4
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Jagadale MB, Salunkhe RS, Rajmane MM, Dhanavade MJ, Sonawane KD, Rashinkar GS. Water-Mediated Synthesis of Anthelmintic Piperidinols and Their Molecular Docking Studies. ChemistrySelect 2018. [DOI: 10.1002/slct.201800375] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
Affiliation(s)
- Megha B. Jagadale
- Department of Chemistry; Shivaji University; Kolhapur, 416004, M.S. India
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Suresh T, Vijayakumar V, Kumar LJ, Sarveswari S, Jotani MM, Otero-de-la-Roza A, Tan YS, Tiekink ER. Hydrogen bonding in 2,6-bis(4-fluorophenyl)-3,5-dimethylpiperidin-4-one methanol solvate. Z KRIST-CRYST MATER 2016. [DOI: 10.1515/zkri-2015-1915] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
Abstract
Abstract
The crystal structure analysis of a 2,6-diaryl 4-piperidone derivative, isolated as a mono-methanol solvate, reveals that both the piperidone and the methanol molecule lie on a crystallographic mirror plane. A chair conformation is found for the piperidone ring with the aryl and methyl groups in equatorial positions. The most prominent feature of the molecular packing is the formation of supramolecular zigzag chains mediated by amine-N–H···O(methanol) and hydroxyl-O–H···N(amine) hydrogen bonds, i.e. the methanol molecule serves as a bridge between piperidone molecules. The molecular structure is compared with that determined in an unsolvated form and the gas-phase equilibrium structure, obtained using density-functional theory (DFT); differences relate, in the main, to the relative dispositions of the aryl rings. An analysis of the Hirshfeld surfaces of the experimental structures indicates very similar relative contributions with the notable exception being the contribution by O···H/H···O which at 13.7% in the methanol solvate is >8.5% in the unsolvated form.
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Affiliation(s)
| | - V. Vijayakumar
- VIT University , Centre for Organic and Medicinal Chemistry, Vellore, Tamil Nadu 632014, India
| | - L. Jyothish Kumar
- VIT University , Centre for Organic and Medicinal Chemistry, Vellore, Tamil Nadu 632014, India
| | - S. Sarveswari
- VIT University , Centre for Organic and Medicinal Chemistry, Vellore, Tamil Nadu 632014, India
| | - Mukesh M. Jotani
- Bhavan’s Sheth R. A. College of Science, Department of Physics , Ahmedabad, Gujarat 380001, India
| | - Alberto Otero-de-la-Roza
- National Research Council of Canada, National Institute for Nanotechnology , 11421 Saskatchewan Drive, Edmonton, Alberta T6G 2M9, Canada
| | - Yee Seng Tan
- Research Centre for Crystalline Materials, Faculty of Science and Technology, Sunway University , 47500 Bandar Sunway, Selangor Darul Ehsan, Malaysia
| | - Edward R.T. Tiekink
- Research Centre for Crystalline Materials, Faculty of Science and Technology, Sunway University , 47500 Bandar Sunway, Selangor Darul Ehsan, Malaysia
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Ramazani A, Rouhani M, Joo SW. Catalyst-free sonosynthesis of highly substituted propanamide derivatives in water. ULTRASONICS SONOCHEMISTRY 2016; 28:393-399. [PMID: 26384923 DOI: 10.1016/j.ultsonch.2015.08.019] [Citation(s) in RCA: 38] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/24/2015] [Revised: 08/25/2015] [Accepted: 08/26/2015] [Indexed: 05/08/2023]
Abstract
A clean, rapid and energy-efficient approach to catalyst-free one-pot synthesis of highly substituted propanamide derivatives in water was developed utilizing of the ultrasonic irradiation. The method has been successful in achieving the green chemistry objective. A catalyst-free operation, an energy efficient protocol using ultrasound irradiation instead of conventional heating or stirring and use of water as a non-hazardous, inexpensive and readily available solvent in the one-step reaction against sequential reaction steps thus combining the features of both economic and environmental advantages.
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Affiliation(s)
- Ali Ramazani
- Department of Chemistry, University of Zanjan, P O Box 45195-313, Zanjan, Iran.
| | - Morteza Rouhani
- Department of Chemistry, University of Zanjan, P O Box 45195-313, Zanjan, Iran.
| | - Sang Woo Joo
- School of Mechanical Engineering, Yeungnam University, Gyeongsan 712-749, Republic of Korea.
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Suresh T, Sarveswari S, Arul murugan N, Vijayakumar V, Iniyavan P, Srikanth A, Jasinski JP. Synthesis, spectral characterization and DFT analysis for the validation of 2, 6 diaryl -piperidin-4-ones as potential sunscreens and UV filters. J Mol Struct 2015. [DOI: 10.1016/j.molstruc.2015.07.011] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
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Romero N, Bernès S, Roa LF, Terán JL, Gnecco D. Crystal structures of two chiral piperidine derivatives: 1-[(1R)-2-hy-droxy-1-phenyl-eth-yl]piperidin-4-one and 8-[(1S)-1-phenyl-eth-yl]-1,4-dioxa-8-aza-spiro-[4.5]decane-7-thione. Acta Crystallogr E Crystallogr Commun 2015; 71:1207-11. [PMID: 26594408 PMCID: PMC4647425 DOI: 10.1107/s2056989015017119] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/29/2015] [Accepted: 09/11/2015] [Indexed: 11/23/2022]
Abstract
The crystal structures of the two title piperidine derivatives show different conformations for the six-membered heterocycle. The N-substituted 4-piperidinone 1-[(1R)-2-hy-droxy-1-phenyl-eth-yl]piperidin-4-one, C13H17NO2, (I), has a chair conformation, while the piperidine substituted in position 2 with a thio-carbonyl group, 8-[(1S)-1-phenyl-eth-yl]-1,4-dioxa-8-aza-spiro-[4.5]decane-7-thione, C15H19NO2S, (II), features a half-chair conformation. Comparison of the two structures, and data retrieved from the literature, suggests that the conformational flexibility is mainly related to the hybridization state of the C atom α to the piperidinic N atom: a Csp (3) atom favours the chair conformer, while a Csp (2) atom distorts the ring towards a half-chair conformer. In the crystal structure of (I), weak C-H⋯O hydrogen bonds link the mol-ecules into supra-molecular chains propagating along the b-axis direction. In the crystal of (II), the mol-ecules are linked by weak C-H⋯S contacts into supra-molecular chains propagating along the b-axis direction.
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Affiliation(s)
- Nancy Romero
- Universidad Juárez Autónoma de Tabasco, División Académica de Ciencias Básicas, Km. 1 carretera Cunduacán, Jalpa de Méndez AP 24, Cunduacán, Tabasco, Mexico
| | - Sylvain Bernès
- Instituto de Física, Benemérita Universidad Autónoma de Puebla, Av. San Claudio y 18 Sur, 72570 Puebla, Pue., Mexico
| | - Luis F. Roa
- Universidad Juárez Autónoma de Tabasco, División Académica de Ciencias Básicas, Km. 1 carretera Cunduacán, Jalpa de Méndez AP 24, Cunduacán, Tabasco, Mexico
| | - Joel L. Terán
- Centro de Química, Instituto de Ciencias, Benemérita Universidad Autónoma de Puebla, 72570 Puebla, Pue., Mexico
| | - Dino Gnecco
- Centro de Química, Instituto de Ciencias, Benemérita Universidad Autónoma de Puebla, 72570 Puebla, Pue., Mexico
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Iniyavan P, Balaji G, Sarveswari S, Vijayakumar V. CuO nanoparticles: synthesis and application as an efficient reusable catalyst for the preparation of xanthene substituted 1,2,3-triazoles via click chemistry. Tetrahedron Lett 2015. [DOI: 10.1016/j.tetlet.2015.07.016] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/25/2022]
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10
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Synthesis and antioxidant studies of novel bi-, tri-, and tetrapodal 9-aryl-1,8-dioxo-octahydroxanthenes. Tetrahedron Lett 2015. [DOI: 10.1016/j.tetlet.2015.01.162] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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Balaji GL, Rajesh K, Venkatesh M, Sarveswari S, Vijayakumar V. Ultrasound-promoted synthesis of bi-, tri- and tetrapodal polyhydroquinolines, 1,4-dihydropyridines and the corresponding pyridines. RSC Adv 2014. [DOI: 10.1039/c3ra45138k] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022] Open
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Rouhani M, Ramazani A, Joo SW. Novel, fast and efficient one-pot sonochemical synthesis of 2-aryl-1,3,4-oxadiazoles. ULTRASONICS SONOCHEMISTRY 2014; 21:262-267. [PMID: 23845411 DOI: 10.1016/j.ultsonch.2013.06.009] [Citation(s) in RCA: 48] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/03/2012] [Revised: 05/08/2013] [Accepted: 06/11/2013] [Indexed: 06/02/2023]
Abstract
Ultrasound promoted synthesis of 2-aryl-1,3,4-oxadiazoles at ambient temperature is reported. The remarkable features of the new procedure are shorter reaction time, excellent yields, cleaner reaction profile and simple experimental and workup procedure.
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Affiliation(s)
- Morteza Rouhani
- Department of Chemistry, University of Zanjan, P.O. Box 45195-313, Zanjan, Iran
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Balaji GL, Rajesh K, Priya R, Iniyavan P, Siva R, Vijayakumar V. Ultrasound-promoted synthesis, biological evaluation and molecular docking of novel 7-(2-chloroquinolin-4-yloxy)-4-methyl-2H-chromen-2-one derivatives. Med Chem Res 2012. [DOI: 10.1007/s00044-012-0290-9] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
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Ultrasound-promoted synthesis of novel 2-chloroquinolin-4-pyrimidine carboxylate derivatives as potential antibacterial agents. RESEARCH ON CHEMICAL INTERMEDIATES 2012. [DOI: 10.1007/s11164-012-0715-6] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/28/2022]
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