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Abdala ME, Rivero MB, Luque ME, Di Lullo D, Luna BE, Carranza PG, Volta BJ, Rivero FD. Proteomic analysis of proteins released by Tritrichomonas foetus: Identification of potential targets for the development of new diagnostic methods. Vet Parasitol 2023; 316:109890. [PMID: 36878106 DOI: 10.1016/j.vetpar.2023.109890] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/28/2022] [Revised: 01/30/2023] [Accepted: 01/31/2023] [Indexed: 02/05/2023]
Abstract
Bovine trichomonosis (BT), a disease of the bovine urogenital tract, is caused by the protozoan Tritrichomonas foetus (Tf). Tf causes endometritis, infertility, and premature death of the embryo, which generates considerable economic losses. The proteins released can mediate fundamental interactions between the pathogen and the host, triggering factors associated with the symptomatology, immune evasion and pathogenesis characteristic of the species. However, little is known about the profile of the proteins released by Tf. In order to contribute to their knowledge, we performed an isolation protocol and a proteomic profiling of the supernatant (SN) content of six Tf isolates. A total of 662 proteins present in the SN of Tf were detected, out of which 121 were shared by the six isolates, while the remaining 541 were found in at least one of the isolates studied. The comparative analyses using the databases of Tf strain genome K revealed 32.9% of uncharacterized proteins. The bioinformatic analyses showed that the main molecular functions predicted were binding (47.9%) and catalytic activity (38.2%). Additionally, we performed immunodetection assays to evidence the antigenic potential of SN proteins. Interestingly, we observed great ability to detect SN proteins from all six isolates using serum from immunized mice and infected bulls. A complementary mass spectrometry assay allowed us to determine that the proteins that showed the strongest signal intensity in the immunoassays were Grp78 (A0A1J4IZS3) and Ap65 (A0A1J4JSR1). This work represents the first proteomic characterization of Tf SN proteins and their antigenic potential, which might be interesting for the future design of new diagnosis and treatment methods for BT.
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Affiliation(s)
- María Eugenia Abdala
- Laboratorio de Biología Molecular, Inmunología y Microbiología (LaBIM), Instituto Multidisciplinario de Salud, Tecnología y Desarrollo (IMSaTeD), CONICET-UNSE, Santiago del Estero, Argentina; Facultad de Ciencias Médicas (FCM-UNSE), Santiago del Estero, Argentina; Facultad de Agronomía y Agroindustrias (FAyA-UNSE), Santiago del Estero, Argentina
| | - María Belén Rivero
- Laboratorio de Biología Molecular, Inmunología y Microbiología (LaBIM), Instituto Multidisciplinario de Salud, Tecnología y Desarrollo (IMSaTeD), CONICET-UNSE, Santiago del Estero, Argentina; Facultad de Ciencias Médicas (FCM-UNSE), Santiago del Estero, Argentina
| | - Melchor Emilio Luque
- Laboratorio de Biología Molecular, Inmunología y Microbiología (LaBIM), Instituto Multidisciplinario de Salud, Tecnología y Desarrollo (IMSaTeD), CONICET-UNSE, Santiago del Estero, Argentina; Facultad de Ciencias Médicas (FCM-UNSE), Santiago del Estero, Argentina; Facultad de Agronomía y Agroindustrias (FAyA-UNSE), Santiago del Estero, Argentina
| | - David Di Lullo
- Laboratorio de Biología Molecular, Inmunología y Microbiología (LaBIM), Instituto Multidisciplinario de Salud, Tecnología y Desarrollo (IMSaTeD), CONICET-UNSE, Santiago del Estero, Argentina
| | - Bruno Elías Luna
- Laboratorio de Biología Molecular, Inmunología y Microbiología (LaBIM), Instituto Multidisciplinario de Salud, Tecnología y Desarrollo (IMSaTeD), CONICET-UNSE, Santiago del Estero, Argentina
| | - Pedro Gabriel Carranza
- Laboratorio de Biología Molecular, Inmunología y Microbiología (LaBIM), Instituto Multidisciplinario de Salud, Tecnología y Desarrollo (IMSaTeD), CONICET-UNSE, Santiago del Estero, Argentina; Facultad de Ciencias Médicas (FCM-UNSE), Santiago del Estero, Argentina; Facultad de Agronomía y Agroindustrias (FAyA-UNSE), Santiago del Estero, Argentina
| | - Bibiana J Volta
- Laboratorio de Biología Molecular, Inmunología y Microbiología (LaBIM), Instituto Multidisciplinario de Salud, Tecnología y Desarrollo (IMSaTeD), CONICET-UNSE, Santiago del Estero, Argentina; Facultad de Ciencias Médicas (FCM-UNSE), Santiago del Estero, Argentina; Facultad de Agronomía y Agroindustrias (FAyA-UNSE), Santiago del Estero, Argentina
| | - Fernando David Rivero
- Laboratorio de Biología Molecular, Inmunología y Microbiología (LaBIM), Instituto Multidisciplinario de Salud, Tecnología y Desarrollo (IMSaTeD), CONICET-UNSE, Santiago del Estero, Argentina; Facultad de Ciencias Médicas (FCM-UNSE), Santiago del Estero, Argentina; Facultad de Agronomía y Agroindustrias (FAyA-UNSE), Santiago del Estero, Argentina.
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Li SH, Li SD, Wu KL, Li JY, Li HJ, Wang WQ, Yang LJ, Xu JJ, Chang GJ, Zhang YL, Shu QH, Zhuang SS, Ma ZQ, He SM, Zhu M, Wang WL, Huang HL. Transcriptome Analysis Reveals Possible Virulence Factors of Paragonimus proliferus. Curr Bioinform 2021. [DOI: 10.2174/1574893615999200728203648] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
Abstract
Objective:
To identify the possible virulence factors (VFs) of P. proliferus.
Methods:
By Illumina HiSeq 4000 RNA-Seq platform, transcriptomes of adult P. proliferus
worms were sequenced to predict VFs via screening the homologues of traditional VFs of parasites
based on the annotations in the functional databases. Homology analysis was also performed to
screen homologous genes between P. proliferus and other four Paragonimus species (i.e., P.
kellicotti, P. skrjabini, P. miyazakii and P. westermani) whose transcriptomes were downloaded
from the National Center for Biotechnology Information (NCBI) database, and then the
differential-expressed homologous genes (DEHGs) were screened via comparisons of P. proliferus
and P. kellicotti, P. skrjabini, P. miyazakii and P. westermani, respectively. Finally, an overlap of
the predicted VFs and DEHGs was performed to identify possible key VFs that do not only belong
to the predicted VFs but also DEHGs.
Results:
A total of 1,509 genes of P. proliferus homologous to traditional VFs, including surface
antigens (SAGs), secreted proteins (SPs), ATP-Binding Cassette (ABC) Transporters, actin-related
proteins (ARPs), aminopeptidases (APases), glycoproteins (GPs), cysteine proteases (CPs), and
heat shock proteins (HSPs), were identified. Meanwhile, homology analysis identified 6279
DEHGs among the five species, of which there were 48 DEHGs being mutually differentialexpressed
among the four pairs of comparisons, such as MRP, Tuba 3, PI3K, WASF2, ADK,
Nop56, DNAH1, PFK-2/FBPase2, Ppp1r7, SSP7. Furthermore, the overlap between the predicted
VFs and DEHGs showed 97 genes of the predicted VFs that simultaneously belonged to DEHGs.
Strikingly, of these 97 genes, only 26, including Chymotrypsin, Leucine APases, Cathepsin L, HSP
70, and so on, were higher expressed in P. proliferus while all the remaining were lower expressed
than in the four other species.
Conclusions:
This work provides a fundamental context for further studies of the pathogenicity of
P. proliferus. Most of the predicted VFs which simultaneously belonged to DEHGs were lower
expressed in P. proliferus.
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Affiliation(s)
- Sheng-Hao Li
- School of Basic Medicine, Kunming Medical University, Kunming 650504, China
| | - Shu-De Li
- School of Basic Medicine, Kunming Medical University, Kunming 650504, China
| | - Kun-Li Wu
- Department of Hepatology, Oncology, Infectious Disease, Health Care or Tuberculosis, the Third People’s Hospital of Kunming, Kunming 650043, China
| | - Jun-Yi Li
- Department of Hepatology, Oncology, Infectious Disease, Health Care or Tuberculosis, the Third People’s Hospital of Kunming, Kunming 650043, China
| | - Hong-Juan Li
- Department of Hepatology, Oncology, Infectious Disease, Health Care or Tuberculosis, the Third People’s Hospital of Kunming, Kunming 650043, China
| | - Wei-Qun Wang
- School of Basic Medicine, Kunming Medical University, Kunming 650504, China
| | - Li-Jun Yang
- School of Basic Medicine, Kunming Medical University, Kunming 650504, China
| | - Jing-Jing Xu
- Department of Hepatology, Oncology, Infectious Disease, Health Care or Tuberculosis, the Third People’s Hospital of Kunming, Kunming 650043, China
| | - Guo-Ji Chang
- Department of Hepatology, Oncology, Infectious Disease, Health Care or Tuberculosis, the Third People’s Hospital of Kunming, Kunming 650043, China
| | - Yan-Ling Zhang
- Department of Hepatology, Oncology, Infectious Disease, Health Care or Tuberculosis, the Third People’s Hospital of Kunming, Kunming 650043, China
| | - Qiu-Hong Shu
- School of Basic Medicine, Kunming Medical University, Kunming 650504, China
| | - Shan-Shan Zhuang
- Department of Clinical Laboratory, Yan’an Hospital of Kunming, Kunming 650000, China
| | - Zhi-Qiang Ma
- School of Basic Medicine, Kunming Medical University, Kunming 650504, China
| | - Shu-Meiqi He
- School of Basic Medicine, Kunming Medical University, Kunming 650504, China
| | - Min Zhu
- School of Basic Medicine, Kunming Medical University, Kunming 650504, China
| | - Wen-Lin Wang
- School of Basic Medicine, Kunming Medical University, Kunming 650504, China
| | - Hong-Li Huang
- Department of Hepatology, Oncology, Infectious Disease, Health Care or Tuberculosis, the Third People’s Hospital of Kunming, Kunming 650043, China
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Dąbrowska J, Keller I, Karamon J, Kochanowski M, Gottstein B, Cencek T, Frey CF, Müller N. Whole genome sequencing of a feline strain of Tritrichomonas foetus reveals massive genetic differences to bovine and porcine isolates. Int J Parasitol 2020; 50:227-233. [PMID: 32109482 DOI: 10.1016/j.ijpara.2019.12.007] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/16/2019] [Revised: 12/17/2019] [Accepted: 12/18/2019] [Indexed: 01/14/2023]
Abstract
Tritrichomonas foetus is a protozoan parasite that colonizes the reproductive tract of cattle as well as the gastrointestinal tract of cats. Bovine tritrichomonosis is a sexually transmitted disease whereas feline tritrichomonosis is thought to be transmitted by the fecal-oral route. Furthermore, T. foetus is known as an essentially apathogenic commensal located in the nasal cavity of pigs. Transmission of T. foetus between the different hosts has to be considered a realistic scenario that may have important implications for the epidemiology of infections and disease. In our study, we generated whole genome sequencing (WGS) data from bovine, feline and porcine T. foetus strains to investigate the genetic (dis)similarities among these diverse strains. As a reference, we used a previously released draft assembly from a bovine T. foetus strain K isolated from an infected bull in Brazil. In particular, we identified single nucleotide polymorphisms (SNPs) and the insertion-deletion (indel) variations within the genomes of the different strains. Interestingly, only a low degree of polymorphism (68 SNPs and indels) was found between the bovine and the porcine strains in terms of variants with a predicted impact of moderate or high and where one species is homozygous for one allele and the other homozygous for the other allele. Conversely, however, a 964 times higher number of such differences was detected by comparing the feline with either the bovine (65,569) or the porcine (65,615) strain. These data clearly indicated a close phylogenetic relationship between bovine and porcine T. foetus but a remarkable genetic distinctness of these two strains from the feline strain. The latter observation was confirmed by PCR-based sequencing of 20 in silico-selected indel markers and five in silico-selected SNP markers that uniformly demonstrated a relatively distant phylogenetic relationship of three independent feline T. foetus isolates in comparison to the bovine and porcine strains investigated. In summary, our comparative genome sequencing approach provided further insights into the genetic diversity of T. foetus in relation to the different host origins of the parasite. Furthermore, our study identified a large number of SNP- and indel-containing sequences that may be useful molecular markers for future epidemiological studies aimed at the elucidation of the transmission patterns of T. foetus within different host species.
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Affiliation(s)
- Joanna Dąbrowska
- Department of Parasitology and Invasive Diseases, National Veterinary Research Institute, Partyzantów Avenue 57, 24-100 Puławy, Poland
| | - Irene Keller
- Department for BioMedical Research and Swiss Institute of Bioinformatics, University of Bern, Baltzerstrasse 6, 3012 Bern, Switzerland
| | - Jacek Karamon
- Department of Parasitology and Invasive Diseases, National Veterinary Research Institute, Partyzantów Avenue 57, 24-100 Puławy, Poland
| | - Maciej Kochanowski
- Department of Parasitology and Invasive Diseases, National Veterinary Research Institute, Partyzantów Avenue 57, 24-100 Puławy, Poland
| | - Bruno Gottstein
- Institute for Infectious Diseases, University of Bern, Friedbühlstrasse 51, 3010 Bern, Switzerland
| | - Tomasz Cencek
- Department of Parasitology and Invasive Diseases, National Veterinary Research Institute, Partyzantów Avenue 57, 24-100 Puławy, Poland
| | - Caroline F Frey
- Institute of Parasitology, Vetsuisse Faculty, University of Bern, Länggassstrasse 122, 3012 Bern, Switzerland
| | - Norbert Müller
- Institute of Parasitology, Vetsuisse Faculty, University of Bern, Länggassstrasse 122, 3012 Bern, Switzerland.
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