Effects of various feedstocks on isotope fractionation of biogas and microbial community structure during anaerobic digestion

Metataxonomic characterization of the microbial present in the anaerobic digestion of turkey litter waste with the addition of two inocula: allochthonous and commercial

Turkey litter waste is lignocellulosic waste that can be sustainably used as an energy source through anaerobic digestion (AD). The 16S ribosomal RNA technique helps to unravel microbial diversity and predominant metabolic pathways. The assays were performed in 600-mL-glass bottles with 400 mL volume, for 60 days at 37 °C. The study evaluated the physicochemical parameters, the composition of the microbiota, and the functional inference in AD of different concentrations of turkey litter (T) using two inocula: granular inoculum (S) and commercial inoculum (B). The highest accumulated methane production (633 mL CH4·L-1) was observed in the test containing 25.5 g VS·L-1 of turkey litter with the addition of the two inocula (T3BS). In tests without inoculum (T3) and with commercial inoculum (T3B), there was an accumulation of acids and consequent inhibition of methane production 239 mL CH4·L-1 and 389 mL CH4·L-1, respectively. Bacteroidota, Firmicutes, and Actinobacteria were the main phyla identified. The presence of archaea Methanobacterium, Methanocorpusculum, and Methanolinea highlighted the hydrogenotrophic metabolic pathway in T3BS. Functional prediction showed enzymes involved in three metabolic pathways in turkey litter biodigestion: acetotrophic, hydrogenotrophic, and methylotrophic methanogenesis. The predominant hydrogenotrophic pathway can be observed by analyzing the microbiota, archaea involved in this specific pathway, genes involved, and relative acid consumption for T3S and T3BS samples with higher methane production. Molecular tools help to understand the main groups of microorganisms and metabolic pathways involved in turkey litter AD, such as the use of different inocula, allowing the development of strategies for the sustainable disposal of turkey litter.

Metataxonomic Studies to Evaluate the Beneficial Effect of Enzymatic Pretreatment on the Anaerobic Digestion of Waste Generated in Turkey Farming

Turkey litter waste is lignocellulosic and keratinous, requiring prior enzymatic treatment to facilitate fiber hydrolysis and utilization by microorganisms in anaerobic digestion (AD) process. The understanding of the performance of microorganisms in AD can be facilitated through molecular biology and bioinformatics tools. This study aimed to determine the taxonomic profile and functional prediction of microbial communities in the AD of turkey litter waste subjected to enzymatic pretreatment and correlate it with operational parameters. The tests involved the use of turkey litter (T) at 25 g L-1 of volatile solids, a granular inoculum (S) (10% m/v), and the addition of cellulase (C), and pectinase (P) enzymes at four concentrations. The use of enzymes increased methane production by 19% (turkey litter, inoculum, and cellulase-TSC4) and 15% (turkey litter, inoculum, and enzymatic pectinase-TSP4) compared to the control (turkey litter and inoculum-TS), being more effective in TSC4 (667.52 mLCH4), where there was consumption of acetic, butyric, and propionic acids. The pectinase assay (TSP4) showed a methane production of 648 mLCH4 and there was the accumulation of metabolites. Cellulolytic microorganisms Bacteroides, Ruminofilibacter, Lachnospiraceae, Ruminococcaceae, and Methanosaeta were favored in TSC4. In TSP4, the predominant genus was Macellibacteroides and Methanosarcina, and genes involved in methylotrophic methanogenesis were also found (mtaB, mtmB, and mtbB). Enzymes involved in hydrogenotrophic methanogenesis were identified in both assays (TSC4 and TSP4). Molecular tools helped to understand the metabolic routes involved in AD with enzymatic treatment, allowing the elaboration of strategies to improve the sustainable degradation of turkey litter waste.

Biotic and abiotic factors acting on community assembly in parallel anaerobic digestion systems from a brewery wastewater treatment plant

Anaerobic digestion is a complex microbial process that mediates the transformation of organic waste into biogas. The performance and stability of anaerobic digesters relies on the structure and function of the microbial community. In this study, we asked whether the deterministic effect of wastewater composition outweighs the effect of reactor configuration on the structure and dynamics of anaerobic digester archaeal and bacterial communities. Biotic and abiotic factors acting on microbial community assembly in two parallel anaerobic digestion systems, an upflow anaerobic sludge blanket digestor (UASB) and a closed digester tank with a solid recycling system (CDSR), from a brewery WWTP were analysed utilizing 16S rDNA and mcrA amplicon sequencing and genome-centric metagenomics. This study confirmed the deterministic effect of the wastewater composition on bacterial community structure, while the archaeal community composition resulted better explained by organic loading rate (ORL) and volatile free acids (VFA). According to the functions assigned to the differentially abundant metagenome-assembled genomes (MAGs) between reactors, CDSR was enriched in genes related to methanol and methylamines methanogenesis, protein degradation, and sulphate and alcohol utilization. Conversely, the UASB reactor was enriched in genes associated with carbohydrate and lipid degradation, as well as amino acid, fatty acid, and propionate fermentation. By comparing interactions derived from the co-occurrence network with predicted metabolic interactions of the prokaryotic communities in both anaerobic digesters, we conclude that the overall community structure is mainly determined by habitat filtering.

Switching from wet to dry anaerobic digestion of food waste with different dilution times under no mechanical mixing condition

Previous research on anaerobic digestion of food waste has primarily focused on either wet or dry anaerobic digestion (AD), typically accompanied by continuous mechanical mixing. However, the necessary dilution rates and the extent of mixing required have yet to be addressed. In this study, we investigated switching from wet to dry AD of food waste without mechanical mixing, employing different dilution rates. Lab-scale anaerobic reactors were operated with dilution rates of 10, 5, and 2 times during Phases I (0-56 days), II (57-121 days), and III (122-209 days), respectively. The methane production rates were not significantly different (p > 0.05) across the dilution rates decreased from 10 to 2 times. Remarkably, the methane production in the anaerobic reactors exhibited fluctuations due to variations in feeding, with the methane production rate ranging from 2.0 to 2.7 g CH4-COD/(L d), without mechanical mixing, as the solids content transitioned from wet to near-dry digestion conditions (15 %, food waste). The distribution of sludge volatile solids concentrations remained uniform in the reactor, even at high solids concentrations of up to 15 %. A dynamic microbial community response to changes in dilution rates, with a shift from aceticlastic to hydrogenotrophic methanogenesis pathways. Syntrophic acetate oxidization bacteria (the genus Syner-01 (4.2-8.9 %) and f_Synergistaceae (3.6-4.2 %)) were highly enriched as switching from wet AD to dry AD. The study's findings provide crucial operational insights for anaerobic food waste treatment, potentially resulting in decreased water usage and operational costs, particularly in scenarios with low dilution rates and without mechanical mixing.

Microbial volatile organic compounds as novel indicators of anaerobic digestion instability: Potential and challenges

The wide application of anaerobic digestion (AD) technology is limited by process fluctuations. Thus, process monitoring based on screening state parameters as early warning indicators (EWI) is a top priority for AD facilities. However, predicting anaerobic digester stability based on such indicators is difficult, and their threshold values are uncertain, case-specific, and sometimes produce conflicting results. Thus, new EWI should be proposed to integrate microbial and metabolic information. These microbial volatile organic compounds (mVOCs) including alkanes, alkenes, alkynes, aromatic compounds are produced by microorganisms (bacteria, archaea and fungi), which might serve as a promising diagnostic tool for environmental monitoring. Moreover, mVOCs diffuse in both gas and liquid phases and are considered the language of intra kingdom microbial interactions. Herein, we highlight the potential of mVOCs as EWI for AD process instability, including discussions regarding characteristics and sources of mVOCs as well as sampling and determination methods. Furthermore, existing challenges must be addressed, before mVOCs profiling can be used as an early warning system for diagnosing AD process instability, such as mVOCs sampling, analysis and identification. Finally, we discuss the potential biotechnology applications of mVOCs and approaches to overcome the challenges regarding their application.

Culture adaptation for enhanced biogas production from birch wood applying stable carbon isotope analysis to monitor changes in the microbial community

Birch wood is a potential feedstock for biogas production in Northern Europe; however, the lignocellulosic matrix is recalcitrant preventing efficient conversion to methane. To improve digestibility, birch wood was thermally pre-treated using steam explosion at 220 °C for 10 min. The steam-exploded birch wood (SEBW) was co-digested with cow manure for a period of 120 days in continuously fed CSTRs where the microbial community adapted to the SEBW feedstock. Changes in the microbial community were tracked by stable carbon isotopes- and 16S r RNA analyses. The results showed that the adapted microbial culture could increase methane production up to 365 mL/g VS day, which is higher than previously reported methane production from pre-treated SEBW. This study also revealed that the microbial adaptation significantly increased the tolerance of the microbial community against the inhibitors furfural and HMF which were formed during pre-treatment of birch. The results of the microbial analysis indicated that the relative amount of cellulosic hydrolytic microorganisms (e.g. Actinobacteriota and Fibrobacterota) increased and replaced syntrophic acetate bacteria (e.g. Cloacimonadota, Dethiobacteraceae, and Syntrophomonadaceae) as a function of time. Moreover, the stable carbon isotope analysis indicated that the acetoclastic pathway became the main route for methane production after long-term adaptation. The shift in methane production pathway and change in microbial community shows that for anaerobic digestion of SEBW, the hydrolysis step is important. Although acetoclastic methanogens became dominant after 120 days, a potential route for methane production could also be a direct electron transfer among Sedimentibacter and methanogen archaea.

Alleviating acid inhibition via bentonite supplementation during acidulated swine manure anaerobic digestion: Performance enhancement and microbial mechanism analysis

Swine manure is usually transmitted by the "collection-storage-transport" mode of the biogas project. However, this particular application pattern results in high volatile fatty acids (VFAs) concentration due to the long transition time in the "collection-storage-transport" process. In this work, acidulated swine manure anaerobic digestion (AD) with bentonite supplementation was firstly investigated with an expectation of acid alleviation, performance enhancement and microbial mechanism. Results indicated that the methane production rate in the 20 g/L bentonite-added digester was 2.87 fold higher than that of the control digester. Chemical oxygen demand (COD) removal rate was elevated by 140.1% via bentonite supplementation. Besides, the rapid decrease of VFAs and ammonia indicated that bentonite supplementation could offer buffering capacity and alleviate acid inhibition. Microbial community analysis revealed that acetoclastic methanogenesis (Methanosaeta and Methanosarcina) was the predominant methanogenesis pathway in this AD system. Syntrophic acetate oxidation (SAO) bacteria were discovered in the bentonite-added digester, and they converted acetate into H₂/CO₂ to support hydrogenotrophic methanogenesis. This study could offer guidance for acidulated swine manure AD in the practical biogas project.

Bioconversion of H2 and CO2 from dark fermentation to methane: Effect of operating conditions on methane concentration

The main goal of this study was to assess the methane production in a biotrickling filter (BTF) using a synthetic gas mixture (H₂/CO₂: 60/40), evaluating the effect of the empty bed gas residence time (EBRT), pH, and temperature. The BTF was inoculated with acclimated granular anaerobic sludge. Three EBRT were tested: 11.6, 5.8, and 2.9 h. The decrease in EBRT (from 11.6 to 5.8 h) increased 1.3-fold the methane content (69 ± 3%) with H₂ and CO₂ removals of 100% and 24 ± 6%, respectively. The following reduction to 2.9 h showed no effect on CH₄ content. The increment of the pH had no significant effect; however, the highest CH₄ percentage (74%) was observed at a pH of 8.5. The system showed flexibility to adapt to changes in temperature without drastically diminishing CH₄ concentration. In these stages, the principal hydrogenotrophic archaea detected was Methanobacterium flexile. Soluble microbial products such as butanol, caproate, and iso-valerate were detected in all the operating stages. This study demonstrates the potential of methane generation from a dark fermentation gaseous effluent.

Effect of fish waste augmentation on anaerobic co-digestion of sludge with food waste

The effect of sudden augmentation with fish waste (FW) on an operating anaerobic digester was investigated. Fifteen repeated FW spikes (FWS) composed of 1% or 5% FW per working volume of digester were suddenly fed into semi-continuous operation of a mixture of sludge and food waste. Overall process efficiency was not inhibited by FW augmentation. The bacterial community were clustered differently in the 5% FWS treatment than in the control and 1% FWS. Protein-degrading bacteria (Porphyromonadacea, Family XI, and Family XII) were commonly found in the 5% FWS treatment. Their proportions positively correlated with numbers of other bacteria and dominant methanogens (Methanosaeta and Methanospirillum), showing their important role in FWS digestion. FWS caused a shift of bacteria community, but an increase in archaeal concentration. Therefore, sudden addition of an appropriate amount of FW to existing digesters did not provoke process failure. This result contributes an ecologically-benign method to process FW.

Copper removal and elemental sulfur recovery from fracturing flowback water in a microbial fuel cell with an extra electrochemical anode

Fracturing flowback water (FFW) from the shale gas exploitation resulted in environmental burden. FFW could be treated by a microbial fuel cell (MFC), but the challenge for the precipitation of ultrafine particles due to the supersaturation of sulfide remains to be addressed. Herein, we reported a Dual-anode MFC (DA-MFC), in which the FFW remediation and elemental sulfur recovery could be performed by regulating potential of the electrochemical anode. The removal of COD and sulfate was 70.0 ± 1.2% and 75.5 ± 0.4% in DA-MFCs by controlling potential at -0.1 V (vs. SHE) for 36 h. Meanwhile, the efficiency of copper removal and elemental sulfur recovery was up to 99.9 ± 0.5% and 75.6 ± 1.8%, respectively, which was attributed by the electrochemical oxidation of sulfide to elemental sulfur. Trichococcus, unclassified Prolixibacteraceae and unclassified Cloacimonadales enriched on the bioanodes of DA-MFCs were sensitive to potential regulation and favorable for degrading complex organics. UnclassifiedSynergistaceae, Desulfobacterium, Desulfovibrio, unclassified bacteria and Syner-01 was conducive to sulfate removal. Moreover, the elimination of Azoarcus due to potential regulation suppressed the biological oxidation of sulfide. Thus, organics were efficiently removed through the biological oxidation and sulfate reduction on bioanode, the copper ions were combined with the sulfide from sulfate reduction to precipitate effectively, and then the excessive sulfide in the system was converted into elemental sulfur attached on the electrochemical anode. The results provide new sights on bio-electrochemical technology for treatment of wastewater containing complex organics, heavy metals and sulfates.

Fed-batch anaerobic digestion of raw and pretreated hazelnut skin over long-term operation

This study provided important insights on the anaerobic digestion (AD) of hazelnut skin (HS) by operating a fed-batch AD reactor over 240 days and focusing on several factors impacting the process in the long term. An efficient reactor configuration was proposed to increase the substrate load while reducing the solid retention time during the fed-batch AD of HS. Raw HS produced maximally 19.29 mL CH₄/g VS_add/d. Polyphenols accumulated in the reactor and the use of NaOH to adjust the pH likely inhibited AD. Maceration and methanol-organosolv pretreatments were, thus, used to remove polyphenols from HS (i.e. 82 and 97%, respectively) and improve HS biodegradation. Additionally, organosolv pretreatment removed 9% of the lignin. The organosolv-pretreated HS showed an increment in methane potential of 21%, while macerated HS produced less methane than the raw substrate, probably due to the loss of non-structural sugars during maceration.

Monitor process state of batch anaerobic digestion in reliance on volatile and semi-volatile metabolome

It has been a challenge to recognize appropriate compounds as indicators for monitoring and early-warning of the anaerobic digestion process. A strategy was initiated to explore the evolution of the panorama profile of volatile and semi-volatile metabolites. Non-target analysis using high-resolution gas chromatography coupled with Orbitrap mass spectrometry was applied to construct a time-series molecular fingerprint of 218 metabolites classified in 14 categories. Alkanes accounted for the main part in early and late stages of methanization and aromatic compounds were the major in middle stage. Spearman correlation analysis and partial least squares analysis unwind that Trichococcus (1.49%-83.96%) was positively related to most of metabolites at early and middle stages, while Brevundimonas (0%-24.04%) was positively related to acylamide at late stage. This indicated that microbial volatile organic compounds were possible to serve as biochemical indicators for anaerobic digestion performance and to build nexus of "what" (metabolites), "who" (microorganism), and "how" (kinetics).

16S rRNA genes- and metagenome-based confirmation of syntrophic butyrate-oxidizing methanogenesis enriched in high butyrate loading

The understanding and enrichment of consortia formed by syntrophic butyrate-oxidizing bacteria and methanogens in the complex environment are crucial for effectively degrading butyrate and preventing acid inhibition. In this study, the better butyrate-tolerated and highly efficient microbial consortia were domesticated and enriched through adding butyric acid ranging from 0.2 to 4.4 g/(L·d). The volumetric biogas production continuously increased to 1.65 L/(L·d). Microbial community diversity showed that a dramatic shift of bacterial structure occurred at BAL of 1.6 g/(L·d) and the structure presented better stability at high BAL. The syntrophic consortia and the main metabolic pathways were revealed through combination of the 16S rDNA and metagenome sequencing analyses. Syntrophomonas was the major butyrate-oxidizing bacterium and oxidized butyrate mainly through β-oxidaiton. Synergistaceae and Mesotoga acted as the main acetate-oxidizing bacteria. IHT and methanogenesis pathways were strongly enhanced by DMER64 and Methanosarcina as the main H₂ carrier and dominant methanogen, respectively.

Effect of sludge retention time on microbial succession and assembly in thermal hydrolysis pretreated sludge digesters: Deterministic versus stochastic processes

Thermal hydrolysis process (THP) assisted anaerobic digestion (AD) has been demonstrated to be an efficient approach to improve biogas production and solids reduction. Given the faster reaction kinetics in the THP-AD system, reduction of sludge retention time (SRT) is possible. However, a comprehensive understanding of the effects of sludge retention time (SRT) on microbial dynamics and community assemblages is still lacking in THP-AD systems. Thus, twelve THP-AD reactors were operated at different SRTs (10-30 d) to fulfill the knowledge gap. Results showed that, although all the bioreactors displayed good performance, shorter SRT reactors (SRT 10 d) took a longer time to reach the stable state. The total biogas production at SRT of 10 d was lower than that at other longer SRTs, attributing to the limited hydrolytic/fermentative capacities of AD microbiomes. Different SRTs resulted in distinct succession patterns of AD microbiomes. THP sludge reduced the microbial diversity in all the bioreactors over time, but longer SRTs maintained higher biodiversity. Null model analysis suggested that THP-AD microbial community assembly was predominately driven by deterministic selection at the tested SRT range, but stochasticity increased with elevated SRTs, likely attributing to the immigrants from the feedstock. Phylogenetic molecular ecological networks (pMENs) analysis revealed more stable network structures at longer SRTs, evidenced by the lower modularity, shorter harmonic geodesic distance, and higher connectivity. The potential keystone taxa under varied SRTs were identified, some of which were hydrolytic/fermentative bacteria (e.g., Peptostreptococcus, Lutispora, Synergistaceae), suggesting that these species related to organic hydrolysis/fermentation even with low-abundance could still play pivotal ecological roles in maintaining the THP-AD microbial community structure and functions. Collectively, this study provides comprehensive and in-depth insights into the mechanisms underlying community assembly in THP-AD reactors, which could aid in diagnosing system stability.

The characteristics of multi-substrates (low and high C/N) anaerobic digestion: focus on energy recovery and the succession of methanogenic pathway

Anaerobic digestion of common rural wastes (human feces (HF), food waste (FW) and lawn grass (LG)) were studied considering the specific methane yield, process parameters and microbial characteristics (mainly microbial community and pathogenic bacteria). The results showed that co-digestion of multiple substrates obtained high digestion performance when the total solid (TS) was 4%. The optimal co-digestion ratio of HF, FW, and LG was 33-56%, 21-38% and 20-40%, respectively. The digestion system containing HF underwent ammonia inhibition, which leads to the succession of the methanogenesis pathway from the acetoclastic pathway to the hydrogenotrophic pathway. Simultaneously, the dominant methanogenic archaea changed from Methanosaeta to Methanobacterium and Methanosarcina. Co-digestion reduced Salmonella's absolute concentration. The recovered energy and nitrogen could meet 52-109 % energy demand of rural community and all nitrogen demand in lawn fertilization, respectively. The main rural organic wastes could be recycled by anaerobic digestion, considering the flexibility of substrate ratio.

In situ biogas upgrading via cathodic biohydrogen using mitigated ammonia nitrogen during the anaerobic digestion of Taihu blue algae in an integrated bioelectrochemical system (BES)

Biohydrogen using migrated ammonia as nitrogen source, and biogas upgrading with hydrogen collected at biocathode in an integrated bioelectrochemical system (BES) were investigated, during the anaerobic digestion of Taihu blue algae. Under an applied voltage of 0.4 V, biohydrogen (202.87 mL) reached 2.34 and 2.90 times than groups with applied voltage of 0 V and 0.8 V, respectively. Moreover, biohydrogen of the group with 1000 mg/L initial ammonia addition (524.16 mL) reached 1.53 times than that the of the control. With 0.25 bar of H₂ injected at the beginning (R1), highest methane production (286.62) mL and content (75.73%) were obtained. Comparing to other groups, not only microbial genus responsible for both aceticlastic and hydrogenotrophic methanogens of the group R1 were apparently enriched, but key enzymes related to methane production also acquired better abundances. Therefore, it's promising to conduct the ammonia alleviating, hydrogen producing and biogas upgrading simultaneously using BES.

Algae biochar enhanced methanogenesis by enriching specific methanogens at low inoculation ratio during sludge anaerobic digestion

Carbon materials are promising in improving the performance of anaerobic digestion, however, interactive mechanisms between the carbon-based enhancement and operating parameters remained unclear. Using anaerobic digested sludge as inoculum, the effects of Taihu blue algae biochar (ABC) on methanogenesis at different inoculation ratios were investigated during sludge anaerobic digestion. Results showed that ABC enhanced methane productions at the lower inoculation ratios (4% and 1%, v/v), but not at the higher ratio (10%, v/v). Mechanism analysis demonstrated methanogenic improvements at the lower inoculation ratios were not owing to initial organic loading rate increments. Otherwise, ABC addition at the lower inoculation ratios were more favorable for the enrichment of Methanosarcina than the higher ratio, which might be benefit for methanogenesis through directed interspecies electron transfer. Thus, for the improvement of sludge anaerobic digestion, the microbial enrichments at different inoculation ratios would be more important than the merely biochar addition.

Multiple electron acceptor-mediated sulfur autotrophic denitrification: Nitrogen source competition, long-term performance and microbial community evolution

Sulfur-driven autotrophic denitrification (SDAD) is feasible for the treatment of low-C/N-ratio and sulfur-laden wastewaters. The nitrite accumulated in SDAD will affect the performance and stability of the system but can be a potential electron acceptor. Thus, single- and multiple-electron acceptor-mediated SDAD systems were investigated. Batch assays revealed that nitrite and nitrate were the preferential options in the SDAD system with single and multiple electron acceptors, respectively. Synchronous nitrogen and sulfur removal was successfully achieved in continuous flow experiments with multiple electron acceptors, and the system could adapt well to high concentrations of sulfide, nitrate and nitrite (i.e., 720, 108 and 64.8 mg L^-1, respectively), with the predominant genera shifting from Thiobacillus (48.88%) at the initial stage to unclassified_p_Firmicute (34.24%) and Syner-01 (12.31%) at the last stage. This work provides a fundamental basis for applying and regulating SDAD with multiple electron acceptors for the remediation of nitrogen- and sulfide- laden wastewaters.

Perspectives on microbial community in anaerobic digestion with emphasis on environmental parameters: A systematic review

This paper review is aiming to comprehensively identify and appraise the current available knowledge on microbial composition and microbial dynamics in anaerobic digestion with focus on the interconnections between operational parameters and microbial community. We systematically searched Scopus, Web of Science, pubmed and Embase (up to August 2019) with relative keywords to identify English-language studies published in peer-reviewed journals. The data and information on anaerobic reactor configurations, operational parameters such as pretreatment methods, temperature, trace elements, ammonia, organic loading rate, and feedstock composition and their association with the microbial community and microbial dynamics were extracted from eligible articles. Of 306 potential articles, 112 studies met the present review objectives and inclusion criteria. The results indicated that both aceticlastic and hydrogenotrophic methanogenesis are dominant in anaerobic digesters and their relative composition is depending on environmental conditions. However, hydrogenotrophic methanogens are more often observed in extreme conditions due to their higher robustness compared to aceticlastic methangoens. Firmicutes and Bacteroidetes phyla are most common fermentative bacteria of the acidogenic phase. These bacteria secrete lytic enzymes to degrade organic matters and are able to survive in extreme conditions and environments due to their spores. In addition, among archaea Methanosaeta, Methanobacterium, and Methanosarcinaceae are found at high relative abundance in anaerobic digesters operated with different operational parameters. Overall, understanding the shifts in microbial composition and diversity as results of operational parameters variation in anaerobic digestion process would improve the stability and process performance.

The fate of anaerobic syntrophy in anaerobic digestion facing propionate and acetate accumulation

How the acetate and propionate accumulation impact anaerobic syntrophy during methane formation is not well understood. To investigate such effect, continuous acetate (35 g/L), propionate (11.25 g/L) and bicarbonate (30 g/L) supplementation were used during mesophilic anaerobic digestion. The high throughput sequencing (16S rRNA and mcrA), Real-Time quantitative PCR, and stable carbon isotope fingerprinting were applied to investigate the structure and activity of microbial community members. The results demonstrated that the abundance of syntrophic acetate oxidizing bacteria exhibited a gradual decrease coupled with heavier stable carbon isotopic signature of methane (δ ¹³CH₄) in the three reagents impacted reactors. The increased acetate and propionate concentrations exerted negative influence on biogas production but the relatively stable hydrogenotrophic methanogens together with syntrophic acetate/propionate oxidizing bacteria kept the stable methane formation facing acetate and propionate accumulation. The functional genes copy number of the hydrogenotrophic Methanocellaceae and Methanomicrobiaceae correlated significantly with δ ¹³CH₄ (R² > 0.74), but only the abundance of Methanocellaceae fitted well with δ ¹³CH₄ (p < 0.05). The δ ¹³CH₄ signatures can predict methanogenesis, as it directly reflects the main methanogenic pathway; yet, further investigation of isotope fractionation in acetate/propionate coupled with δ ¹³CH₄ is needed. Collectively, these results provide deep insight into anaerobic syntrophy and reveal changes of synergistic relationships, both of which may contribute to the stability of biogas reactors.

Obstacles faced by methanogenic archaea originating from substrate-driven toxicants in anaerobic digestion

Anaerobic digestion (AD) is used to treat waste and produce bioenergy. However, toxicants, which originate from the substrate, can inhibit or damage the digestion process. Methanogenic archaea (MA), which are the executor in the methanogenesis stage, are more sensitive than bacteria to these toxicants. This review discusses the effects of substrate-driven toxicants, namely, antibiotics, H₂S and sulfate, heavy metals (HMs), long-chain fatty acids (LCFAs), and ammonia nitrogen, on the activity of MAs, methanogenic pathways, and the inter-genus succession of MAs. The adverse effects of these five toxicants on MA include effects on pH, damages to cell membranes, the prevention of protein synthesis, changes in hydrogen partial pressure, a reduction in the bioavailability of trace elements, and hindrance of mass transfer. These effects cause a reduction in MA activity and the succession of MAs and methanogenic pathways, which affect AD performance. Under the stress of these toxicants, succession occurs among HA (hydrogenotrophic methanogen), AA (acetoclastic methanogen), and MM (methylotrophic methanogen), especially HA gradually replaces AA as the dominant MA. Simultaneously, the dominant methanogenic pathway also changes from the aceticlastic pathway to other methanogenic pathways. A comprehensive understanding of the impact of toxicants on MA permits more specific targeting when developing strategies to mitigate or eliminate the effects of these toxicants.

Unveiling microbial structures during raw microalgae digestion and co-digestion with primary sludge to produce biogas using semi-continuous AnMBR systems

Methane production from microalgae can be enhanced through anaerobic co-digestion with carbon-rich substrates and thus mitigate the inhibition risk associated with its low C:N ratio. Acclimated microbial communities for microalgae disruption can be used as a source of natural enzymes in bioenergy production. However, co-substrates with a certain microbial diversity such as primary sludge might shift the microbial structure. Substrates were generated in a Water Resource Recovery Facility (WRRF) and combined as follows: Scenedesmus or Chlorella digestion and microalgae co-digestion with primary sludge. The study was performed using two lab-scale Anaerobic Membrane Bioreactors (AnMBR). During three years, different feedstocks scenarios for methane production were evaluated with a special focus on the microbial diversity of the AnMBR. 57% of the population was shared between the different feedstock scenarios, revealing the importance of Anaerolineaceae members besides Smithella and Methanosaeta genera. The addition of primary sludge enhanced the microbial diversity of the system during both Chlorella and Scenedesmus co-digestion and promoted different microbial structures. Aceticlastic methanogen Methanosaeta was dominant in all the feedstock scenarios. A more remarkable role of syntrophic fatty acid degraders (Smithella, Syntrophobacteraceae) was observed during co-digestion when only microalgae were digested. However, no significant changes were observed in the microbial composition during anaerobic microalgae digestion when feeding only Chlorella or Scenedesmus. This is the first work revealing the composition of complex communities for semi-continuous bioenergy production from WRRF streams. The stability and maintenance of a microbial core over-time in semi-continuous AnMBRs is here shown supporting their future application in full-scale systems for raw microalgae digestion or co-digestion.

Biogas production from palm oil mill effluent and empty fruit bunches by coupled liquid and solid-state anaerobic digestion

Biogas production of palm oil mill effluent (POME) and empty fruit bunches (EFB) was performed by coupled liquid (L-AD) and solid-state (SS-AD) anaerobic digestion processes. POME was fed to L-AD digester, while mixed of effluent from L-AD and EFB was fed to SS-AD digester. The maximum overall methane production of 60.9 m³-CH₄·ton^-1 waste was obtained at an optimal hydraulic retention time of 30 days and an organic loading rate of 1.66 gVS·L^-1-reactor·d^-1 for L-AD and 6.03 gVS·L^-1-reactor·d^-1 for SS-AD with L-AD effluent recycling rate of 16.7 mL·L^-1-reactor·d^-1. The bacterial community in the L-AD reactor was different from the SS-AD reactor, while the archaeal community was similar in both reactors. Synergistaceae, Caldicoprobacteraceae and Lachnospiraceae were increased in the SS-AD reactor. Coupling L-AD and SS-AD is able to increase energy production by 29% and 71% compared to the L-AD and SS-AD alone, respectively, with no outsource SS-AD inoculum required.

Effect of one step temperature increment from mesophilic to thermophilic anaerobic digestion on the linked pattern between bacterial and methanogenic communities

Process fluctuation caused by temperature modification of anaerobic digestion is routinely monitored via operational parameters, such as pH and gas production, but these parameters are lagging on microbial community performance. In this study, ¹³C isotope fractionation in CH₄ and CO₂ of biogas together with microbial community dynamics were applied to evaluate process stability in response to temperature increment. Results showed that the weakening correlated links between Firmicutes affiliated families and Methanomicrobiaceae were found regarding temperature increase. In contrast, Methanosarcinaceae and Methanobacteriaceae strengthened their links with multiple bacterial groups. This suggests that the ¹³C isotope fractionation in CH₄ can predict the collapse of certain microbial interconnections and process instability, the new reinforced microbial links directly reflect the microbial community redundancy for maintaining function of syntrophic populations.

A socio-economic analysis of biomethane in the transport sector: The case of Italy

The transport sector has a low penetration of renewable energy, and this presents a serious obstacle to tackling climate change. Biomethane is seen as a decarbonisation solution, but only some European countries have pursued its development. Italy is one of these countries, having released a decree to stimulate development of the sector. The present work considers two typologies of substrate (the organic fraction of municipal solid waste and by-products) used in three sizes of plants (125 m³/h, 250 m³/h and 500 m³/h). A detailed socio-economic analysis is presented and policy implications are provided. The recovery of waste enables the creation of a circular economy, but the economic feasibility of such a model is verified in only some scenarios. A sensitivity analysis on the critical variables is conducted to support investment in this area. The use of green gas is found to be capable of significantly reducing greenhouse gas emissions in the transport sector, but the economic value of any environmental externality is low due to the value of carbon dioxide.

Assessment of the start-up process of anaerobic digestion utilizing swine manure: 13C fractionation of biogas and microbial dynamics

The aim of this study was to investigate how the microbial community structure adapts during the start-up phase and how the ¹³C fractionation of biogas reflects the microbial population dynamics in two parallel swine manure-fed anaerobic digesters. Two swine manure-fed reactors for the start-up of continuously stirred tank reactors at mesophilic condition were evaluated. Changes in community structure were monitored using 16S rRNA high-throughput sequencing to measure the abundance of fermenting bacteria and methanogens. Digesters with relatively stable Methanosarcinaceae started up successfully and contained high gas production and low levels of propionate. In contrast, the digester that experienced a difficult start-up period had reduced Methanosarcinaceae along with accumulated propionate and low gas production. Specific gas production, specific methane production, and ¹³C fractionation of biogas were influenced significantly by Methanosarcinaceae, Methanobacteriaceae, and Clostridiaceae, indicating that the ¹³C fractionation of biogas had significant potential to reflect microbial population changes and digester performance during the start-up period.