Spatiotemporal dynamics and correlation networks of bacterial and fungal communities in a membrane bioreactor

An overview of quorum sensing in shaping activated sludge forms: Mechanisms, applications and challenges

Activated sludge method is an effective method for the wastewater treatment and has been widely applied. Activated sludge usually exists in various forms such as activated sludge floc, biofilm and granule. Due to the different character and function for each sludge type, the role and mechanism in the wastewater treatment process are also different, but all were crucial. The quorum sensing (QS) /quorum quenching (QQ) have been demonstrated and proved to regulate the group behavior by secreting signaling molecules among microorganisms and thus affect the manifestation of sludge. However, the complex mechanisms and regulatory strategies of QS/QQ in sludge forms have not been systematically summarized. This review provided an overview on the mechanism of QS/QQ shaping sludge forms from macro to micro (Explore it through signaling molecules, extracellular polymeric substances and microorganisms). In addition, the application and challenges of QS/QQ regulating sludge forms in various wastewater treatment processes including biofilm batch reactor, granule sludge and membrane bioreactor were discussed. Finally, some suggestions for further research and development of effective and economical QS/QQ strategies are put forward.

Sludge floc characteristics and microbial community in high-rate activated sludge and high-rate membrane bioreactor for organic recovery

High-rate activated sludge (HRAS) and high-rate membrane bioreactor (HRMBR) are considered as potential processes for organic recovery through bioflocculation and biosorption of particulate COD and colloidal COD with sludge flocs. In this study, bioflocculation and biosorption, in terms of sludge floc characteristics and microbial community, in HRAS and HRMBR was investigated in relation to organic recovery performance for low strength wastewater treatment. HRAS and HRMBR were operated at two different solids retention times (SRTs) of 2 and 0.8 days. Reducing the SRT of HRAS from 2.0 to 0.8 days resulted in failure in total COD (tCOD) removal efficiency (from 79 ± 2 to 34 ± 13 %) and lowering organic recovery (from 40.8 to 15.7 %). This contrasted with HRMBR, which showed high tCOD removal efficiency (84 ± 2 and 84 ± 1 %) and organic recovery (43.4 and 46.3 %) at both SRTs of 2.0 and 0.8 days. Analysis of sludge floc characteristics showed that the lower organic recovery of the HRAS operated at an SRT of 0.8 days could be associated with poor bioflocculation and biosorption, as evidenced by relatively larger floc size, higher extracellular polymeric substance, higher protein/polysaccharide ratio, and higher zeta potential value of the sludge. These characteristics were in contrast to the HRMBR operated at an SRT of 0.8 days, that exhibited the highest organic recovery among the reactors studied. The microbial taxa Bdellovibrio, Clostridium sensu stricto 9, Hyphomicrobium, and Ideonella could play a role in the poor bioflocculation and biosorption in HRAS. Rhodanobacter, Enterobacter, Terrimonas, Nakamurella, and Mizugakiibacter may be associated with bioflocculation and biosorption and organic recovery in HRMBR. The results of this study enhanced our understanding on the relationships between the microbial community, sludge floc characteristics, and organic recovery performance of HRAS and HRMBR for future optimization of the systems.

Temporal patterns of algae in different urban lakes and their correlations with environmental variables in Xi'an, China

Urban lakes were critical in aquatic ecology environments, but how environmental factors affected the distribution and change characteristics of algal communities in urban lakes of Xi'an city was not clearly. Here, we investigated the algal community structure of six urban lakes in Xi'an and evaluated the effects of water quality parameters on algae. The results indicated that the significant differences on physicochemical parameters existed in different urban lakes. The maximum concentration of total phosphorus in urban lakes was (0.18 ± 0.01) mg/L and there was a phenomenon of phosphorus limitation. In addition, 51 genera of algae were identified and Chlorella sp. was the dominant algal species, which was affiliated with Chlorophyta. Network analysis elucidated that each lake had a unique algal community network and the positive correlation was dominant in the interaction between algae species, illustrating that mature microbial communities existed or occupied similar niches. Redundancy analysis illustrated that environmental factors explained 47.35% variance of algal species-water quality correlation collectively, indicating that water quality conditions had a significant influence on the temporal variations of algae. Structural equation model further verified that algal community structure was directly or indirectly regulated by different water quality conditions. Our study shows that temporal patterns of algal communities can reveal the dynamics and interactions of different urban ecosystem types, providing a theoretical basis for assessing eutrophication levels and for water quality management.

Does quorum quenching matter to microbial community dynamics in long-term membrane bioreactor operation?

Quorum quenching (QQ) has effectively prevented biofouling in membrane bioreactors (MBRs) employing isolated QQ bacterial strains. However, the influence of QQ on the microbial population still needs to be fully understood. This research aims to analyze the microbial population in MBRs over an extended period (>250 days) under different conditions, such as varying aeration intensities and doses of QQ bacteria, QQ media, and types of feed. Results show that no significant changes occurred in the structure and diversity of the microbial community in the mixed liquor and biofilm due to QQ treatment. Canonical correspondence analysis did reveal that the microbial communities were strongly influenced by feed types and phases. The microbial community composition varied between bacterial habitats (i.e., mixed liquor and biofilm), showing the two dominant phyla Proteobacteria and Bacteroidota in the former and Proteobacteria and Chloroflexi in the latter. The co-occurrence network analysis indicated that the biofilm (with 163 edges) in the MBR fed with real wastewater exhibited a more intricate network than the biofilm (with 53 edges) in the MBR fed with synthetic wastewater. With QQ, the biofilm exhibited more positive edges than negative ones. The phylogenetic investigation of communities showed that QQ barely affects functional gene-related quorum sensing (e.g., bacterial chemotaxis, motility proteins, and secretion) in mixed liquor but in biofilms at relatively large QQ doses (> 75 mg/L BH4). This research sheds light on the bacterial QQ's role in reducing MBR biofouling and provides crucial insights into its underlying mechanisms.

Shift of phytoplankton assemblages in a temperate lake located on the eastern route of the South-to-North Water Diversion Project

There remains no consensus on the effects of changes in the environment factors under the action of water diversions on phytoplankton communities. Herein the changing rules applying to phytoplankton communities subject to water diversion were unveiled based on long-term (2011-2021) time-series observations on Luoma Lake, located on the eastern route of the South-to-North Water Diversion Project. We found that nitrogen decreased and then increased, while phosphorus increased after operation of the water transfer project. Algal density and diversity were not affected by water diversion, while the duration of high algal density was shorter after water diversion. Phytoplankton composition had dramatic differences before and after water transfer. The phytoplankton communities exhibited greater fragility when they first experienced a human-mediated disturbance, and then they gradually adapted to more interferences and acquired stronger stability. We furthermore found the niche of Cyanobacteria narrowed while that of Euglenozoa widened under the pressure of water diversion. In addition to WT and DO, the main environmental factor before water diversion was NH₄-N, whereas the effect of NO₃-N and TN on phytoplankton communities increased after water diversion. These findings fill the knowledge gap as to the consequence of water diversion on water environments and phytoplankton communities.

Effect of fine bubbles for washing of monolith type porous ceramic membranes treating oil-in-water emulsions

Produced water generated in the recovery of crude oil contains oil and high concentrations of salts, organic matter, and suspended solids and must therefore be treated appropriately prior to disposal. Monolithic ceramic membranes have high oil removal rates and have the advantage of being compact, having a long life, and withstanding chemicals, heat, and high cleaning pressures. Membrane fouling, however, is a significant drawback to membrane filtration. Scrubbing using air bubbles generated by a diffuser is generally used to physically clean membranes. However, monolithic ceramic membranes cannot be scrubbed using air bubbles because their fluid channels are only a few millimeters wide. Membrane washing efficiency was therefore evaluated using fine bubbles smaller than the diameter of the channels. In dead-end filtration, flushing the membrane surface with air-microbubble water or air-ultra-fine bubble (UFB) water after backwashing and air-blowing (conventional cleaning) of the channels was more efficient than conventional cleaning. Flushing with UFB water was not influenced by changes in pH that changed the zeta potential of the UFB. Membrane fouling was suppressed in crossflow filtration by mixing UFB water with feed water. There was no significant change in the diameter of the oil droplets in the feed water before and after UFB mixing. The ZP of the oil droplets peaked at around -20 mV before UFB mixing. However, the peak shifted to around -25 to -29 mV after UFB mixing.

Cyanobacterial bloom intensities determine planktonic eukaryote community structure and stability

The intensity of cyanobacterial blooms that predominate in the world's lakes and reservoirs is variable, which may lead to differing effects on the freshwater ecosystem. Planktonic eukaryotes play key roles in the structure and function of freshwater ecosystems; however, little is known about the influence of cyanobacterial blooms on eukaryotic plankton communities and their function. Herein, the dynamics of eukaryotic plankton communities in Hongze Lake, which is the fourth largest freshwater lake in China, with a range of bloom levels occurred, from low to high, were studied to reveal the effect of cyanobacterial blooms' spatial heterogeneity on planktonic eukaryotes. Results showed that the diversity, richness, and evenness of eukaryotic plankton community were not affected by low level of bloom; however, they were decreased obviously by high level of bloom. Metazoa, Ochrophyta, Chloroplastida, Cryptomonadales, and Ciliophora were the main planktonic eukaryotes in this lake. Metazoa relative abundance declined 25.1% and relative abundance of eukaryotic phytoplankton (mainly Ochrophyta, Chloroplastida, and Cryptomonadales) and Ciliophora increased 17.4% and 2.0%, respectively, during the period with low level of bloom; conversely, the site with the high bloom level manifested the opposite changes. The linkage density of planktonic eukaryotic network was 0.188 and 0.138 with low and high level of bloom, respectively, indicating the stability of planktonic eukaryotes was lower when a high level of bloom occurred compared to that of a low bloom level. Our findings indicate that cyanobacterial blooms should be controlled at low level to avoid their obvious negative impact on microeukaryotes in lakes or reservoirs.

Biofilm Formation and Biofouling Development on Different Ultrafiltration Membranes by Natural Anaerobes from an Anaerobic Membrane Bioreactor

Biofouling in anaerobic membrane bioreactors (AnMBRs) has not been studied widely. Moreover, the effect of membrane surface properties on biofilm formation beyond initial deposition is controversial. We investigated biofouling with polyvinyldifluoride, polyacrylonitrile, and zwitterion-modified polyethersulfone ultrafiltration membranes having different properties during 72 h filtration using natural anaerobes isolated from AnMBR and analyzed biofilm characteristics by physicochemical and molecular techniques. A decrease in membrane performance was positively correlated with biofilm formation on polyvinyldifluoride and polyacrylonitrile membranes, and as expected, physical cleaning effectively mitigated biofilm on hydrophilic and low-roughness membranes. Surprisingly, while the biofilm on the hydrophilic and low-surface roughness zwitterion-modified membrane was significantly impaired, the impact on transmembrane pressure was the highest. This was ascribed to the formation of a soft compressible thin biofilm with high hydraulic resistance, and internal clogging and pore blocking due to high pore-size distribution. Anaerobe community analysis demonstrated some selection between the bulk and biofilm anaerobes and differences in the relative abundance of the dominant anaerobes among the membranes. However, correlation analyses revealed that all membrane properties studied affected microbial communities' composition, highlighting the system's complexity. Overall, our findings indicate that the membrane properties can affect biofilm formation and the anaerobic microbial population but not necessarily alleviate biofouling.

A comprehensive assessment of fungi in urban sewer biofilms: Community structure, environmental factors, and symbiosis patterns

Sewers are important parts of wastewater treatment facilities and the fungal microbial communities therein make large contributions to the biotransformation of wastewater. Therefore, this experiment constructed an experimental sewer system and characterized the fungal microbial communities using ITS high-throughput sequencing technology in combination with network structure analysis and statistical correlation analysis methods. The results demonstrated that the overall diversity of the fungal communities gradually increased as growth phases progressed, but the dominant groups differed significantly among phases. In the early growth phase (RS1) the dominant genera were Apiotrichum and Inocybe, with abundances of 34% and 14%, respectively, while the middle and late growth phases (RS2 and RS3) were dominated by Candida, with a relative abundance of 47%-66%. CCA and correlation analysis showed that the fungal communities diversity from the artificial sewers had significant positive correlations with COD (r² = 0.44, p < 0.05) and NH₄⁺ (r² = 0.64, p < 0.05) and that environmental factors significantly influenced the abundances of Fusarium and Aspergillus. Network analysis revealed differences in the fungal groups representing key nodes during different periods. Candida, Trichosporon, Fusarium, and Aspergillus played important roles in the microbial ecosystem of the simulated sewer systems. This study provides data-supported insight into the bacterial-fungal interaction mechanisms and associated pollutant biodegradation technologies in sewers.

Effects of dispersal on species distribution, abundance, diversity and interaction in a bacterial biofilm metacommunity

AIMS

Dispersal effects on biofilms have not been adequately studied despite their strong potential impacts on biofilm development. We investigated the effects of dispersal on biofilm metacommunity.

METHODS AND RESULTS

A bacterial consortium was allowed to form biofilms on 12 glass beads attached to disposable plates (compartmentalized or not), and biofilms were scrutinized on days 5, 10 and 15 using quantitative PCR and MiSeq sequencing. Biofilm population density was lesser by 2 orders of magnitude on day 5 when dispersal was allowed (p < 0.05). Then, the population rapidly increased by 4.4 orders with dispersal (p < 0.05) but did not change without dispersal. Community analyses revealed that dispersal increased the species diversity at all sampling times (p < 0.05). Dispersal affected the community structure and increased the homogeneity of local communities (p < 0.05). Distance-decay analysis showed that dispersal reduced the dissimilarity among local communities at all distance levels. Furthermore, dispersal reduced the variability of diversity, population and community structure. Network analysis revealed that dispersal increased the clustering coefficient, network density and connectivity.

CONCLUSIONS

Dispersal increased the species diversity, population and interaction and reduced the variability of the diversity, population and structure among local communities.

SIGNIFICANCE AND IMPACT OF STUDY

Our results suggest that dispersal can induce the niche complementarity and mass effects.

Using sodium percarbonate to suppress vertically distributed filamentous cyanobacteria while maintaining the stability of microeukaryotic communities in drinking water reservoirs

The increasing frequency and intensity of blooms of toxin- and taste & odour-producing filamentous cyanobacteria in water sources is a growing global issue. Compared to the common spherical Microcystis genus, the removal of filamentous cyanobacteria is more difficult in drinking water treatment plants; hence, abatement and control of the occurrence and proliferation of harmful filamentous cyanobacteria within drinking water sources is important for water supply. In this study, the solid sodium percarbonate (SPC), Na₂CO₃·1.5H₂O₂, was used as an algaecide to eliminate the cyanobacteria distributed throughout the water column in the surface and bottom layer of a reservoir serving as a drinking water source. Results showed that although the oxidation capacity of SPC was higher in the surface water due to the higher light intensity than in the bottom water, 3.0 mg/L SPC can still suppress the harmful cyanobacteria in the bottom water after 36 h because the carbonate ion generated by SPC decomposition can act as an activator of H₂O₂ to generate many reactive oxygen species - including superoxide radicals, carbonate radical anions, and hydroxyl radicals - even in the light-limited environment. The obtained inactivation rates for the main cyanobacteria in this reservoir followed the order: Pseudanabaena limnetica > Raphidiopsis curvata > Cylindrospermopsis raciborskii. 3.0 mg/L SPC has a slight impact on microeukaryotic communities according to the 18S rRNA gene sequencing, while 6.0 mg/L SPC changed the composition of eukaryotic phytoplankton and zooplankton clearly. Eukaryotic co-occurrence networks showed that although the network of eukaryotic plankton in treated surface water was more compact and clustered, stability of microeukaryotes in the treated surface water was lower than for the treated bottom water, owing to the higher oxidation capacity of SPC in the surface water. The results above not only have important implications for full-scale control of harmful cyanobacteria in drinking water sources, especially filamentous cyanobacteria with vertical distributions, but also help to ensure the health and stability of the whole aquatic ecosystem.

Effects of Plants on Metacommunities and Correlation Networks of Soil Microbial Groups in an Ecologically Restored Wetland

Plants may influence different aspects of the belowground microorganisms, including abundance, distribution, and interaction, in wetlands. Microbial communities were scrutinized in a 4-year-old restored wetland ecosystem with 5 distinct sites: a bare-soil site (10 local patches) and sites dominated by Miscanthus, Phragmites, Typha, and Zizania (20 patches per site). Ordination analysis revealed that plant-induced attributes (e.g., organic matter and total carbon and nitrogen) could explain the total environmental variance. Community comparisons showed that all groups (Bacteria, Fungi, Protista, and Metazoa) differed in community structure among the 5 sites (P < 0.05). Comparisons between the community and environmental ordination plots revealed that community structural variation among the sites correlated with the environmental change across all groups (R² ≥ 0.61). This indicates that all groups were primarily influenced by plant detritus. In addition, correlation networks markedly varied in topology and composition among the sites across all groups. There was a strong coupling between the metacommunity and correlation network for both Bacteria and Fungi (R² ≥ 0.58), indicating that the plants determined the spatial covariation patterns of microbial populations. Multi-group networks and group synchrony results revealed that Bacteria, Fungi, and Protista were synchronized with each other (R² ≥ 0.52) as the key founders of the microbial systems, while Metazoa participated in the system only under Miscanthus. Our findings concluded that the plants shaped the communities by controlling the abundance and interaction of their populations.

Spatial Variance of Species Distribution Predicts the Interspecies Interactions within a Microbial Metacommunity

Interspecies interactions have a profound influence on spatial distribution of coexisting microbial species. We explored whether spatial variance of species distribution (SVSD) predicts the degree of interspecies interactions within a microbial metacommunity. Simulations were used to determine the relationships from random, lake, soil, and biofilm metacommunity datasets (1,000 times). All of the bacterial datasets showed a negative correlation between the habitat breadth (inverse to SVSD) and the numbers of total, positive, and negative interspecies interactions (P < 0.05); the only exception was the relationship between habitat breadth and negative interactions in the biofilm dataset. The random dataset had no significant relationships (P > 0.05). We repeated the simulations to determine the degree of correlation and reproducibility (100 times). Habitat breadth was negatively correlated with the total and positive interactions in all of the real datasets (P < 0.05), and the negative relationships persisted across repetitions. Despite variability in the slope of total interactions, the slope values of positive interactions were similar for the real datasets (- 19.9, - 19.2, and - 25.8 for lake, soil, and biofilm, respectively). In conclusion, our results demonstrate the patterns of species interaction-distribution and show that interspecies interactions are positively correlated with the SVSD.

Seasonality and Community Separation of Fungi in a Municipal Wastewater Treatment Plant

Fungi are known to play important roles in pollutant transformation in activated sludge-based wastewater treatment plants (WWTPs). However, the seasonality and distributions of fungal populations in different-sized flocs have still remained largely unknown. In this study, seasonal population dynamics and community separation of fungi in a municipal WWTP across a 1-year period were investigated. We classified all taxa into six categories based on abundances to assess their roles and contributions to the whole community. The results showed that the rare taxa (<0.01%) contributed greatly to species richness (95.27%). Conversely, although low in species diversity, abundant taxa (≥1%) accounted for the majority (89.45%) of the total relative abundance, which suggested that a few core abundant fungi existed in the activated sludge ecosystem. The abundant, conditionally rare, and rare taxa contributed 30.14%, 31.11%, and 38.75%, respectively, to temporal shifts in community structure, and their abundances responded differently to environmental variables, suggesting that these three subcommunities exhibited a large difference in environmental sensitivity. Importantly, the results revealed seasonal dynamics of the whole fungal community and the subcommunities of all the microbial taxon categories, resulting in significant differences in community structures between warm and cold seasons. Furthermore, fungal diversity and the compositions of the whole community and subcommunities differed significantly among flocs of different sizes, which underlined the size-based fungal community separation in activated sludge of WWTPs. The findings of this work improved our understanding of fungal population dynamics and community separation in WWTPs.IMPORTANCE Fungi are important contributors to the various functions of activated sludge in wastewater treatment plants (WWTPs). Unlike previous studies, this work demonstrated the seasonality of the fungal community over a longer time span while it also systematically assessed the contributions of abundant, conditionally rare, and rare taxa to the whole community. Importantly, in the present study, we considered sludge flocs of a certain size range rather than the whole sludge flocs as a community. Our results revealed significant differences in fungal community structure among different-sized flocs, which supported the idea that size-based fungal community segregation is occurring in activated sludge ecosystems. The findings provide new insights into the dynamic changes or distribution of fungi in the bioaggregates of sludge flocs in WWTPs.

Ecological and functional research into microbiomes for targeted phenolic removal in anoxic carbon-based fluidized bed reactor (CBFBR) treating coal pyrolysis wastewater (CPW)

Powdered activated carbon (PAC), lignite activated coke (LAC) and Fe-C carriers were applied to enhance CBFBRs to degrade targeted phenolics. In start-up stage, PAC and LAC equipped CBFBRs with higher environment adaptability and phenolic degradation capacity for phenol (>96%), p-cresol (>91%) and 3, 5-dimethylphenol (>84%) in comparison to Fe-C carrier. In recovery stage, the superior performance was also identified for CBFBRs in basis of PAC and LAC than Fe-C-based reactor. However, the Fe-C carrier assisted CBFBR with more stable degradation performance under impact loading. By comparing microbiomes, significantly enriched Brachymonas (54.80%-68.81%) in CBFBRs exerted primary role for phenolic degradation, and positively contributed to microbial network. Meanwhile, Geobacter in Fe-C-based reactor induced excellent impact resistance by enhancing interspecific electron transfer among microbes. Furthermore, the investigation on functional genes related to phenolic degradation revealed that anaerobic pathway accounted for demethylation procedure, while aerobic pathways dominated the phenolic ring-cleavage process.

Interactions of PAH-degradation and nitrate-/sulfate-reducing assemblages in anaerobic sediment microbial community

Nitrate and sulfate are electron acceptors (EAs) for biodegradation of polycyclic aromatic hydrocarbons (PAHs) in anaerobic sediments. The efficiency of PAHs biodegradation depends on the strength of the interactions between PAH-degradation and EA-reduction assemblages. However, these interactions are less studied. In this study, microbial response and PAH degradation efficiencies in river sediment were investigated using nitrate and sulfate stimulation. Results showed that the functional assemblages (PAH-degraders, nitrate- and sulfate- reducers) were low connectivity in the microbial network without EA adding. Nitrate input rapidly (<1 day) raised the nitrate reduction intensity. And the PAH-degraders and nitrate reducers established significant and direct correlations under nitrate stimulation, seen from the 13 connectors (nodes) in the microbial network. In contrast, sulfate reducers slowly increased in abundance (>20 days) and were connected to PAH-degraders through indirect connection under sulfate stimulation. The null model suggested that nitrate led to a higher level of directional selection, which implied that nitrate was a more favorable EA to trigger the deterministic succession. As a result, PAHs degradation was faster with nitrate stimulation (t_1/2 = 68.3 d) than with sulfate stimulation (t_1/2 = 164.6 d). These mechanistic understandings can serve as the guidelines for EA selection in bioremediation.

Feasibility of isolated novel facultative quorum quenching consortiums for fouling control in an AnMBR

Anaerobic membrane bioreactor (AnMBR) technology is being recognized as an appealing strategy for wastewater treatment, however, severity of membrane fouling inhibits its widespread implementations. This study engineered novel facultative quorum quenching consortiums (FQQs) coping with membrane fouling in AnMBRs with preliminary analysis for their quorum quenching (QQ) performances. Herein, Acyl-homoserine lactones (AHLs)-based quorum sensing (QS) in a lab-scale AnMBR initially revealed that N-Hexanoyl-dl-homoserine lactone (C6-HSL), N-Octanoyl-dl-homoserine lactone (C8-HSL) and N-Decanoyl-dl-homoserine lactone (C10-HSL) were the dominant AHLs in AnMBRs in this study. Three FQQs, namely, FQQ-C6, FQQ-C8 and FQQ-C10, were harvested after anaerobic screening of aerobic QQ consortiums (AeQQs) which were isolated by enrichment culture, aiming to degrade C6-HSL, C8-HSL and C10-HSL, respectively. Growth of FQQ-C6 and FQQ-C10 using AHLs as carbon source under anaerobic condition was significantly faster than those using acetate, congruously suggesting that their QQ performance will not be compromised in AnMBRs. All FQQs degraded a wide range of AHLs pinpointing their extensive QQ ability. FQQ-C6, FQQ-C8 and FQQ-C10 remarkably alleviated extracellular polymeric substances (EPS) production in a lab-scale AnMBR by 72.46%, 35.89% and 65.88%, respectively, and FQQ-C6 retarded membrane fouling of the AnMBR by 2 times. Bioinformatics analysis indicated that there was a major shift in dominant species from AeQQs to FQQs where Comamonas sp., Klebsiella sp., Stenotrophomonas sp. and Ochrobactrum sp. survived after anaerobic screening and were the majority in FQQs. High growth rate utilizing AHLs under anaerobic condition and enormous EPS retardation efficiency in FQQ-C6 and FQQ-C10 could be attributed to Comamonas sp.. These findings demonstrated that FQQs could be leveraged for QQ under anaerobic systems. We believe that this was the first work proposing a bacterial pool of facultative QQ candidates holding biotechnological promises for membrane fouling control in AnMBRs.

Effects of Quorum Quenching on Biofilm Metacommunity in a Membrane Bioreactor

Quorum quenching (QQ) has received attention for the control of biofilms, e.g., biofilms that cause biofouling in membrane bioreactors (MBRs). Despite the efficacy of QQ on biofouling, it is elusive how QQ influences biofilm formation on membranes. A pilot-scale QQ-MBR and non-QQ-MBR were identically operated for 4 days and 8 days to destructively sample the membranes. QQ prolonged the membrane filterability by 43% with no harmful influence on MBR performance. qPCR showed no effect of QQ on microbial density during either of these time periods. Community comparisons revealed that QQ influenced the bacterial and fungal community structures, and the fungal structure corresponded with the bacterial structure. Metacommunity and spatial analyses showed that QQ induced structural variation rather than compositional variation of bacteria and fungi. Moreover, QQ considerably enhanced the bacterial dispersal across membrane during the early development. As the dispersal enhancement by QQ counteracted the ecological drift, it eliminated the distance-decay relationship, reflecting a neutral theory archetype of metacommunity. Network analyses showed that QQ substantially reduced the amount and magnitude of interactions, e.g., competition and cooperation, for bacteria and fungi, and weakened their network structures, irrespective of time. Additionally, QQ suppressed the growth of specific microbial species (e.g., Acinetobacter), abundant and widespread at the early stage. These findings suggest that QQ influenced the community dynamics at the regional and local levels, correspondingly the ecological selection and dispersal processes, during the biofilm development.

Comparative investigation on carbon-based moving bed biofilm reactor (MBBR) for synchronous removal of phenols and ammonia in treating coal pyrolysis wastewater at pilot-scale

By regulating the extraction solvent and alkali in pretreatment, two carbon-based MBBRs were compared in pilot-scale to synchronously remove phenols and ammonia of coal pyrolysis wastewater (CPW) under fluctuant phenols-ammonia loadings. It revealed that lignite activated coke (LAC)-based MBBR performed more stable with phenols increasing (250-550 mg/L), and reached higher tolerance limit to ammonia (>320 mg/L) than activated carbon (AC)-based MBBR under fluctuant ammonia loadings. During the phenols-ammonia synchronous removal process, the LAC provided the firm basis for shock resistance due to superior resilient adsorption capacity, enhanced sludge property and microbial cooperation. Furthermore, microbial analysis revealed that the strengthened collaboration between archaea and facultative bacteria played the primary role in phenols-ammonia synchronous degradation. Specifically, the heterotrophic bacteria consumed phenols-ammonia by partial nitrification process and ammonia assimilation, following by denitrifying process to further eliminate phenols. The multifunctional Comamonas was the critical genus participating in all procedures.

Bacterial assembly in the bio-cake of membrane bioreactors: Stochastic vs. deterministic processes

Much about assembly processes dictating bio-cake microbiota remains uncertain, leading to poor understanding of membrane biofouling in membrane bioreactors (MBRs). This work aimed to reveal the underlying mechanisms driving bio-cake community during the biofouling process under different flux conditions. On the basis of 16S rRNA sequences, the results showed that bacterial diversity decreased with increasing fouling. Additionally, low-flux bio-cake (8 LMH) communities harbored much lower diversity than high-flux (16 LMH) bio-cake microbiomes. Ecological null model analyses and phylogenetic molecular ecological networks (pMENs) revealed that environmental filtering deterministically governed low-flux bio-cake communities. In contrast, high-flux bio-cake communities were mainly shaped in a stochastic manner. This is likely due to the higher stochastic deposition of bacterial taxa from bulk sludge because of the presence of a stronger drag force. Moreover, by lowering the flux, the interactions between bacterial lineages were enhanced; this is evidenced by the greater number of links, the higher average degree, and the higher average clustering coefficients within the pMENs in low-flux bio-cakes than those in high-flux bio-cakes. Most keystone fouling-related taxa in low-flux bio-cakes were motile and involved in nitrate reduction and polysaccharide/protein metabolism. This corroborated the important role of environmental filtering in the assembly process dictating low-flux bio-cake formation. Some low-abundance taxa were observed to be key fouling-related bacteria under both flux conditions, indicating that a few populations play paramount ecological roles in triggering biofouling. In summary, our findings clearly indicate distinct bio-cake community assembly patterns under different operational conditions and highlight the importance of developing specialized strategies for fouling control in individual MBR systems.

Fouling Development in A/O-MBR under Low Organic Loading Condition and Identification of Key Bacteria for Biofilm Formations

Membrane fouling in membrane bioreactors (MBR) remains a major issue and knowledge of microbes associated with biofilm formation might facilitate the control of this phenomenon, Thus, an anoxic/oxic membrane bioreactor (A/O-MBR) was operated under an extremely low organic loading rate (0.002 kg-COD·m⁻³·day⁻¹) to induce membrane fouling and the major biofilm-forming bacteria were identified. After operation under extremely low organic loading condition, the reactor showed accumulation of total nitrogen and phosphorus along with biofilm development on the membrane surface. Thus, membrane fouling induced by microbial cell lysis was considered to have occurred. Although no major changes were observed in the microbial community structure of the activated sludge in the MBR before and after membrane fouling, uncultured bacteria were specifically increased in the biofilm. Therefore, bacteria belonging to candidate phyla including TM6, OD1 and Gammaproteobacteria could be important biofilm-forming bacteria.

Deciphering the core fouling-causing microbiota in a membrane bioreactor: Low abundance but important roles

Currently, membrane biofouling in membrane bioreactors (MBRs) is normally attributed to the occurrence of abundant bacterial species on membranes, whereas the roles of low-abundance bacteria have not been paid sufficient attention. In this study, the linear discriminant analysis (LDA) effect size (LEfSe) algorithm was used to identify active biomarkers, determining 67 different phylotypes among Bulk sludge, low-fouling Bio-cake (10 kPa), high-fouling Bio-cake (25 kPa) and Membrane pore in a membrane bioreactor with NaOCl backwash. Interestingly, a large proportion of the active biomarkers in bio-cake samples, such as Methylophilaceae, Burkholderiaceae, Paucibacter and Pseudoxanthomonas, did not fall within the abundant taxa (i.e., <0.05% relative abundance), indicating the preferential growth of these low-abundance bacteria on the membrane surface. Furthermore, the characterization of microbial interactions using a random matrix theory (RMT)-based network approach obtained a network consisting of 120 nodes and 228 edges. Specifically, network analysis showed the presence of an intense competition among bacterial species in the fouling-related communities, suggesting that negative interactions have an important effect on determining the microbial community structure. More importantly, the LEfSe algorithm and network analysis showed that most of the core species of the bio-cake, such as Burkholderiaceae, Bacillus and Rhodothermaceae, merely amounted to a very low relative abundance (<1%), suggesting their unrecognized and over-proportional ecological role in triggering the initial biofilm formation and subsequent biofilm maturation during MBR operation. Overall, this work should improve our understanding of the bacterial community structure on the fouled membranes in MBRs.

Microbial ecology of full-scale wastewater treatment systems in the Polar Arctic Circle: Archaea, Bacteria and Fungi

Seven full-scale biological wastewater treatment systems located in the Polar Arctic Circle region in Finland were investigated to determine their Archaea, Bacteria and Fungi community structure, and their relationship with the operational conditions of the bioreactors by the means of quantitative PCR, massive parallel sequencing and multivariate redundancy analysis. The results showed dominance of Archaea and Bacteria members in the bioreactors. The activated sludge systems showed strong selection of Bacteria but not for Archaea and Fungi, as suggested by diversity analyses. Core OTUs in influent and bioreactors were classified as Methanobrevibacter, Methanosarcina, Terrestrial Group Thaumarchaeota and unclassified Euryarchaeota member for Archaea; Trichococcus, Leptotrichiaceae and Comamonadaceae family, and Methylorosula for Bacteria and Trichosporonaceae family for Fungi. All influents shared core OTUs in all domains, but in bioreactors this did not occur for Bacteria. Oligotype structure of core OTUs showed several ubiquitous Fungi oligotypes as dominant in sewage and bioreactors. Multivariate redundancy analyses showed that the majority of core OTUs were related to organic matter and nutrients removal. Also, there was evidence of competition among Archaea and Fungi core OTUs, while all Bacteria OTUs were positively correlated among them. The results obtained highlighted interesting features of extremely cold temperature bioreactors.