Whole genome sequence analysis of Geitlerinema sp. FC II unveils competitive edge of the strain in marine cultivation system for biofuel production

Intracellular metabolomic profiling of Picochlorum sp. under diurnal conditions mimicking outdoor light, temperature, and seasonal variations

INTRODUCTION

This study focuses on metabolic profiling of a robust marine green algal strain Picochlorum sp. MCC39 that exhibits resilient growth under diverse outdoor open pond conditions. Given its potential for producing high-value chemicals through metabolic engineering, understanding its metabolic dynamics is crucial for pathway modification.

OBJECTIVES

This study primarily aimed to investigate the metabolic response of Picochlorum sp. to environmental changes. Unlike heterotrophs, algae are subject to diurnal light and temperature, which affect their growth rates and metabolism. Using an environmental photobioreactor (ePBR), we explored how the algal strain adapts to fluctuations in light intensities and temperature within a simulated pond environment.

METHODS

We performed a reverse phase ion pairing-LC/MS-MS based metabolome profiling of the MCC39 strain cultivated in simulated pond conditions in ePBR. The experimental setup included diurnal and bi-seasonal variations in light intensities and temperature.

RESULTS

The metabolome profile revealed significant differences in 85 metabolites, including amino acids, carboxylic acids, sugar phosphates, purines, pyrimidines, and dipeptides, which exhibited up to 25-fold change in relative concentration with diurnal variations. Seasonal variations also influenced the production of storage molecules, revealing a discernible pattern. The accumulation pattern of metabolites involved in cellular wall formation and energy generation indicated a well-coordinated initiation of photosynthesis and the Calvin cycle with the onset of light.

CONCLUSION

The results contribute to a deeper understanding of the adaptability and metabolic response of Picochlorum sp., laying the groundwork for future advancements in algal strain modification.

Production of sustainable thermoplastic composites from waste nitrogen fertilizer-grown marine filamentous cyanobacterium Geitlerinema sp

The global demand for petroleum-derived plastics continues to increase, as does pollution caused by plastic consumption and landfilling plastic waste. Recycling waste plastics by thermomechanical molding may be advantageous, but it alone cannot address the challenges associated with plastic demand and its widespread pollution. A more sustainable and cleaner approach for recycling plastic waste could be to produce thermoplastic composite blends of waste plastic and biobased alternative materials such as marine algal biomass. In this study, Geitlerinema sp., a marine cyanobacterium, was cultivated with waste nitrogen fertilizer as a nitrogen source, resulting in phycocyanin content and biomass density of 6.5% and 0.7 g/L, respectively. The minimum and maximum tensile strengths of thermoplastic blends containing Geitlerinema sp. biomass, recycled glycerol plasticizer, and waste plastic were 0.29-23.2 MPa, respectively. The tensile strength and Young's modulus of thermoplastic composites decreased as the Geitlerinema sp. biomass concentration increased. Furthermore, thermal analysis revealed that thermoplastics containing Geitlerinema sp. biomass have lower thermal onset and biomass degradation temperatures than waste polyethylene. Nevertheless, 35-50% of Geitlerinema sp. biomass could be a sustainable biobased alternative feedstock for producing thermoplastic blends, making the recycling of waste plastics more sustainable and environmentally friendly.

Clustered Regularly Interspaced Short Palindromic Repeat/CRISPR-Associated Protein and Its Utility All at Sea: Status, Challenges, and Prospects

Initially discovered over 35 years ago in the bacterium Escherichia coli as a defense system against invasion of viral (or other exogenous) DNA into the genome, CRISPR/Cas has ushered in a new era of functional genetics and served as a versatile genetic tool in all branches of life science. CRISPR/Cas has revolutionized the methodology of gene knockout with simplicity and rapidity, but it is also powerful for gene knock-in and gene modification. In the field of marine biology and ecology, this tool has been instrumental in the functional characterization of 'dark' genes and the documentation of the functional differentiation of gene paralogs. Powerful as it is, challenges exist that have hindered the advances in functional genetics in some important lineages. This review examines the status of applications of CRISPR/Cas in marine research and assesses the prospect of quickly expanding the deployment of this powerful tool to address the myriad fundamental marine biology and biological oceanography questions.

Stromatolites as Biosignatures of Atmospheric Oxygenation: Carbonate Biomineralization and UV-C Resilience in a Geitlerinema sp. - Dominated Culture

Modern stromatolites are key to the record of past microbial activity preserved in fossil carbonate deposits. Mono-phototrophic cultures dominated by the cyanobacterium Geitlerinema sp. were obtained from a laboratory-maintained, low magnesium-calcite stromatolite originating from Lagoa Vermelha, Brazil. This lagoonal system has been described as a Precambrian analog, illustrating a period of photosynthetically induced atmospheric oxygenation, which created a global sanctuary from shortwave solar radiation and enabled the evolution of modern life on Earth. The enrichment cultures precipitate carbonates in minimal media, suggesting that cyanobacterial photosynthesis and extracellular polymeric substance production may be crucial in the mineralization of the studied stromatolite. We further show that Geitlerinema sp. can build and maintain filamentous mats under long-term UV-C exposure. Our results suggest that present day stromatolites dominated by cyanobacteria may be interpreted as biosignatures of atmospheric oxygenation and have implications for the search for putative biological traces on Mars.

Potential use of a thermal water cyanobacterium as raw material to produce biodiesel and pigments

Global energy demand is increasing every day and most is still derived from non-renewable sources. Therefore, sustainable alternatives are sought to produce biofuels, such as biodiesel. Several studies have demonstrated the potential of microalgae and cyanobacteria to produce biodiesel and pigments. These pigments, such as lutein and astaxanthin, have a high commercial value and can economically support the production of biodiesel. However, few studies have explored the potential of cyanobacteria collected in thermal water. In these microorganisms, both biomass and metabolites production can be altered by the culture form. Thus, a cosmopolitan filamentous cyanobacterium (Geitlerinema amphibium) from thermal water was collected and isolated to evaluate its potential to produce fatty acids, biodiesel, and pigments in two culture media. G. amphibium was cultured in WC (Wright's Cryptophyte) and BBM (Bold's Basal Medium) media. Thermal stress (40 °C for 48 h) was applied to the medium, which generated higher productivity of the biomass in BBM. The cyanobacterium contained higher biodiesel content in the WC medium and higher pigment content in the BBM medium. Thermal stress increased the biodiesel content by 350%, but decreased pigment content. Two pigments with high commercial value (astaxanthin and lutein) were identified. G. amphibium produced up to 2.74 mg g^-1 of astaxanthin and 5.49 mg g^-1 of lutein, which is seven times more lutein than Marigold, currently the main raw material used commercially. Therefore, G. amphibium has the potential to produce biodiesel, astaxanthin, and lutein concomitantly.