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Matsui M, Panha S, Eto K. Two New Species of Leptobrachella from Northern Thailand (Amphibia, Anura, Megophryidae). CURRENT HERPETOLOGY 2023. [DOI: 10.5358/hsj.42.83] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/25/2023]
Affiliation(s)
| | - Somsak Panha
- Department of Biology, Faculty of Science, Chulalongkorn University, Bangkok 10330, THAILAND
| | - Koshiro Eto
- Kitakyushu Museum of Natural History & Human History, Higashida 2–4–1, Yahatahigashi, Kitakyushu, Fukuoka 805–0071, JAPAN
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Kitchener AC, Hoffmann M, Yamaguchi N, Breitenmoser-Würsten C, Wilting A. A system for designating taxonomic certainty in mammals and other taxa. Mamm Biol 2022. [DOI: 10.1007/s42991-021-00205-3] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/24/2023]
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Fukuyama I, Vogel G, Matsui M, Eto K, Munir M, Hossman MY, Hamidy A, Nishikawa K. Systematics of Calliophis intestinalis with the Resurrection of Calliophis nigrotaeniatus (Elapidae, Serpentes). Zoolog Sci 2021; 37:586-594. [PMID: 33269875 DOI: 10.2108/zs200100] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/24/2020] [Accepted: 08/14/2020] [Indexed: 11/17/2022]
Abstract
The red-bellied form of Calliophis intestinalis (Laurenti, 1768) sensu lato was originally reported from Pahang, west Malaysia. To determine the taxonomic status of this form, we examined the type specimens of Elaps sumatranus Lidth De Jeude, 1890, Calliophis intestinalis everetti (Boulenger, 1896), and Callophis furcatus var. nigrotaeniatus Peters, 1863. The results indicated that the red-bellied form of C. intestinalis should be named as Calliophis nigrotaeniatus comb. nov., whose valid species status was based on morphological and molecular analyses. We designate a lectotype and redescribe the species, which is genetically close to Calliophis bilineatus (Peters, 1881) from the Philippines, and is clearly distinguishable from other congeners by possessing a pair of gray or dark blue lateral stripes and by being bright red on the ventrum. Elaps sumatranus and C. i. everetti are relegated to subjective junior synonyms of C. nigrotaeniatus.
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Affiliation(s)
- Ibuki Fukuyama
- Graduate School of Human and Environmental Studies, Kyoto University, Yoshida-Nihonmatsu, Sakyo, Kyoto 606-8501, Japan,
| | - Gernot Vogel
- Society for Southeast Asian Herpetology, Im Sand 3, D-69115 Heidelberg, Germany
| | - Masafumi Matsui
- Graduate School of Human and Environmental Studies, Kyoto University, Yoshida-Nihonmatsu, Sakyo, Kyoto 606-8501, Japan
| | - Koshiro Eto
- Kitakyushu Museum of Natural History & Human History, Higashida 2-4-1, Yahatahigashi, Kitakyushu, Fukuoka 805-0071, Japan
| | - Misbahul Munir
- Graduate School of Global Environmental Studies, Kyoto University, Yoshida-Honmachi, Sakyo, Kyoto 606-8501, Japan
| | - Mohamad Yazid Hossman
- Research, Development and Innovation Division, Sarawak Forest Department, Kuching 93250, Sarawak, Malaysia
| | - Amir Hamidy
- Museum Zoologicum Bogoriense, Research Center for Biology, Indonesian Institute of Sciences, Cibinong 16911, West Java, Indonesia
| | - Kanto Nishikawa
- Graduate School of Human and Environmental Studies, Kyoto University, Yoshida-Nihonmatsu, Sakyo, Kyoto 606-8501, Japan.,Graduate School of Global Environmental Studies, Kyoto University, Yoshida-Honmachi, Sakyo, Kyoto 606-8501, Japan
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Zhao L, Zhang JX, Zhang YH. Genetic boundary and gene flow between 2 parapatric subspecies of brown rats. Curr Zool 2020; 66:677-688. [PMID: 33391367 PMCID: PMC7769575 DOI: 10.1093/cz/zoaa027] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/14/2020] [Accepted: 05/30/2020] [Indexed: 12/30/2022] Open
Abstract
Two parapatric Rattus norvegicus subspecies, R. n. humiliatus (RNH) and R. n. caraco (RNC), are classified according to morphological divergence and are mainly distributed in North and Northeast China. Here, we aimed to explore the population genetic structure, genetic boundary, and gene flow in these rats using 16 microsatellite loci. Structure analysis and principal component analysis revealed 3 ancestral clusters. We found that the intermediate cluster exhibited higher genetic diversity and a lower inbreeding coefficient than the other 2 clusters. The genetic differentiation between the 3 clusters was significant but weak, with a higher FST value being observed between the clusters on both sides. The subspecies boundary inferred from microsatellite markers may indicate the existence of an admixture or hybridization area covering Liaoning, Inner Mongolia, and Jilin Provinces, rather than corresponding to the administrative provincial boundaries between Liaoning and Jilin. The RNH and RNC subspecies presented moderate gene exchange and an asymmetric bidirectional gene flow pattern, with higher gene flow from the RNH subspecies to the RNC subspecies, constraining speciation. Such genetic characteristics might be explained by biological processes such as dispersal ability, mate choice, and dynamic lineage boundaries.
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Affiliation(s)
- Lei Zhao
- State Key Laboratory of Integrated Management of Pest Insects and Rodents in Agriculture, Institute of Zoology, Chinese Academy of Sciences, Beichen West Road 1-5, Chaoyang District, Beijing 100101, China.,CAS Center for Excellence in Biotic Interactions, University of Chinese Academy of Sciences, Beijing, 100049, China
| | - Jian-Xu Zhang
- State Key Laboratory of Integrated Management of Pest Insects and Rodents in Agriculture, Institute of Zoology, Chinese Academy of Sciences, Beichen West Road 1-5, Chaoyang District, Beijing 100101, China.,CAS Center for Excellence in Biotic Interactions, University of Chinese Academy of Sciences, Beijing, 100049, China
| | - Yao-Hua Zhang
- State Key Laboratory of Integrated Management of Pest Insects and Rodents in Agriculture, Institute of Zoology, Chinese Academy of Sciences, Beichen West Road 1-5, Chaoyang District, Beijing 100101, China
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Matsui M, Nishikawa K, Eto K, Hossman MY. Two New Ansonia from Mountains of Borneo (Anura, Bufonidae). Zoolog Sci 2020; 37:91-101. [PMID: 32068378 DOI: 10.2108/zs190078] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/14/2019] [Accepted: 08/27/2019] [Indexed: 11/17/2022]
Abstract
Two lineages of stream toads in the genus Ansonia from Malaysian Borneo have long been suspected to be specifically distinct on the basis of molecular data. We assessed the taxonomic status of these lineages using morphological and additional genetic data. In mtDNA phylogeny, each lineage-one from Bario, Kelabit Highlands of Sarawak, the other from Mt. Mulu of Sarawak and the Crocker Range of Sabah-is separated from other congeners by large genetic distances, comparable with those observed between heterospecific species in the genus. These lineages are also morphologically distinguishable from other species, and are considered to represent valid, independently evolving species. We therefore describe them as A. kelabitensis sp. nov. and A. kanak sp. nov.
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Affiliation(s)
- Masafumi Matsui
- Graduate School of Human and Environmental Studies, Kyoto University, Yoshida Nihonmatsu-cho, Sakyo-ku, Kyoto 606-8501, Japan,
| | - Kanto Nishikawa
- Graduate School of Human and Environmental Studies, Kyoto University, Yoshida Nihonmatsu-cho, Sakyo-ku, Kyoto 606-8501, Japan
| | - Koshiro Eto
- Graduate School of Human and Environmental Studies, Kyoto University, Yoshida Nihonmatsu-cho, Sakyo-ku, Kyoto 606-8501, Japan.,Kitakyushu Museum of Natural History & Human History, 2-4-1 Higashida, Yahatahigashi-ku, Kitakyushu, Fukuoka 805-0071, Japan
| | - Mohamad Yazid Hossman
- Research, Development and Innovation Division, Sarawak Forest Department, Kuching 93660, Sarawak, Malaysia
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Draškić G, Wangkulangkul S, Martínez-Solano I, Vörös J. Strong genetic subdivision in Leptobrachium hendricksoni (Anura: Megophryidae) in Southeast Asia. AMPHIBIA-REPTILIA 2018. [DOI: 10.1163/15685381-17000102] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/19/2022]
Abstract
Many biodiversity hotspots are located in areas with a complex geological history, like Southeast Asia, where species diversity may still be far underestimated, especially in morphologically conservative groups like amphibians. Recent phylogenetic studies on the frog genusLeptobrachiumfrom Southeast Asia revealed the presence of deeply divergent mitochondrial clades inLeptobrachium hendricksonifrom Malaysia and Sumatra but populations from Thailand have not been studied so far. In this study, we re-evaluate patterns of intraspecific genetic diversity inL. hendricksonibased on the analysis of combined sequences of mitochondrial 12S and 16S genes (1310 base pairs) including for the first time samples from southern Thailand. Thai populations ofL. hendricksoniformed a distinct clade with respect to populations from central and southern Malaysia and Sumatra. High sequence divergence between lineages from Thailand, Malaysia and Sumatra suggests the possible presence of cryptic species inL. hendricksoni. Divergence withinL. hendricksonidates back to the late Miocene, around 6 Mya, when lineages from Thailand, north Malaysia and Sumatra split from a lineage in south Malaysia, at about the same time as rising sea levels isolated the Thai-Malay peninsula. Subsequent splits took place later in the Pliocene, around 4.5 and 2.6 Mya. Our results highlight the role of geological history in promoting population divergence and speciation.
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Affiliation(s)
- Gordon Draškić
- Department of Biology, Faculty of Science, Prince of Songkhla University, Songkhla, Karnjanavanit Soi 15 Rd., Hatyai 90110, Thailand
- Laboratory of Molecular Taxonomy, Hungarian Natural History Museum, Ludovika tér 2-6, Budapest 1083, Hungary
| | - Sansareeya Wangkulangkul
- Department of Biology, Faculty of Science, Prince of Songkhla University, Songkhla, Karnjanavanit Soi 15 Rd., Hatyai 90110, Thailand
| | - Iñigo Martínez-Solano
- Departamento de Biodiversidad y Biología Evolutiva, Museo Nacional de Ciencias Naturales c/José Gutiérrez Abascal, 2, 28006 Madrid, Spain
| | - Judit Vörös
- Laboratory of Molecular Taxonomy, Hungarian Natural History Museum, Ludovika tér 2-6, Budapest 1083, Hungary
- Department of Zoology, Hungarian Natural History Museum, Baross u. 13, Budapest 1088, Hungary
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Matsui M, Eto K, Nishikawa K, Hamidy A, Belabut D, Ahmad N, Panha S, Khonsue W, Grismer LL. Mitochondrial Phylogeny ofLeptolalaxfrom Malay Peninsula andLeptobrachella(Anura, Megophryidae). CURRENT HERPETOLOGY 2017. [DOI: 10.5358/hsj.36.11] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
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Unusually high genetic diversity in the Bornean Limnonectes kuhlii-like fanged frogs (Anura: Dicroglossidae). Mol Phylogenet Evol 2016; 102:305-19. [DOI: 10.1016/j.ympev.2016.06.009] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/03/2016] [Revised: 06/27/2016] [Accepted: 06/28/2016] [Indexed: 11/22/2022]
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Matsui M, Zainudin R, Nishikawa K. A New Species ofLeptolalaxfrom Sarawak, Western Borneo (Anura: Megophryidae). Zoolog Sci 2014; 31:773-9. [DOI: 10.2108/zs140137] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
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Hamidy A, Matsui M. A New Species ofLeptobrachiumfrom the Kelabit Highland, Northwestern Borneo (Anura, Megophryidae). CURRENT HERPETOLOGY 2014. [DOI: 10.5358/hsj.33.57] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/24/2022]
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Matsui M. A NewLeptobrachium(Vibrissaphora) from Laos (Anura: Megophryidae). CURRENT HERPETOLOGY 2013. [DOI: 10.5358/hsj.32.182] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/24/2022]
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Eto K, Matsui M, Sugahara T. Discordance between Mitochondrial DNA Genealogy and Nuclear DNA Genetic Structure in the Two Morphotypes ofRana tagoi tagoi(Amphibia: Anura: Ranidae) in the Kinki Region, Japan. Zoolog Sci 2013; 30:553-8. [DOI: 10.2108/zsj.30.553] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
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