Paleoclimate determines diversification patterns in the fossorial snake family Uropeltidae Cuvier, 1829

Largest known madtsoiid snake from warm Eocene period of India suggests intercontinental Gondwana dispersal

Here we report the discovery of fossils representing partial vertebral column of a giant madtsoiid snake from an early Middle Eocene (Lutetian, ~ 47 Ma) lignite-bearing succession in Kutch, western India. The estimated body length of ~ 11-15 m makes this new taxon (Vasuki indicus gen et sp. nov.) the largest known madtsoiid snake, which thrived during a warm geological interval with average temperatures estimated at ~ 28 °C. Phylogenetically, Vasuki forms a distinct clade with the Indian Late Cretaceous taxon Madtsoia pisdurensis and the North African Late Eocene Gigantophis garstini. Biogeographic considerations, seen in conjunction with its inter-relationship with other Indian and North African madtsoiids, suggest that Vasuki represents a relic lineage that originated in India. Subsequent India-Asia collision at ~ 50 Ma led to intercontinental dispersal of this lineage from the subcontinent into North Africa through southern Eurasia.

Their fates intertwined: diversification patterns of the Asian gliding vertebrates may have been forged by dipterocarp trees

The repeated evolution of gliding in diverse Asian vertebrate lineages is hypothesized to have been triggered by the dominance of tall dipterocarp trees in the tropical forests of Southeast Asia. These dipterocarp forests have acted as both centres of diversification and climatic refugia for gliding vertebrates, and support most of their extant diversity. We predict similarities in the diversification patterns of dipterocarp trees and gliding vertebrates, and specifically test whether episodic diversification events such as rate shifts and/or mass extinctions were temporally congruent in these groups. We analysed diversification patterns in reconstructed timetrees of Asian dipterocarps, the most speciose gliding vertebrates from different classes (Draco lizards, gliding frogs and Pteromyini squirrels) and compared them with similar-sized clades of non-gliding relatives (Diploderma lizards, Philautus frogs and Callosciurinae squirrels) from Southeast Asia. We found significant declines in net-diversification rates of dipterocarps and the gliding vertebrates during the Pliocene-Pleistocene, but not in the non-gliding groups. We conclude that the homogeneity and temporal coincidence of these rate declines point to a viable ecological correlation between dipterocarps and the gliding vertebrates. Further, we suggest that while the diversification decay in dipterocarps was precipitated by post-Miocene aridification of Asia, the crises in the gliding vertebrates were induced by both events concomitantly.

A near-complete species-level phylogeny of uropeltid snakes harnessing historical museum collections as a DNA source

Uropeltidae is a clade of small fossorial snakes (ca. 64 extant species) endemic to peninsular India and Sri Lanka. Uropeltid taxonomy has been confusing, and the status of some species has not been revised for over a century. Attempts to revise uropeltid systematics and undertake evolutionary studies have been hampered by incompletely sampled and incompletely resolved phylogenies. To address this issue, we take advantage of historical museum collections, including type specimens, and apply genome-wide shotgun (GWS) sequencing, along with recent field sampling (using Sanger sequencing) to establish a near-complete multilocus species-level phylogeny (ca. 87% complete at species level). This results in a phylogeny that supports the monophyly of all genera (if Brachyophidium is considered a junior synonym of Teretrurus), and provides a firm platform for future taxonomic revision. Sri Lankan uropeltids are probably monophyletic, indicating a single colonisation event of this island from Indian ancestors. However, the position of Rhinophis goweri (endemic to Eastern Ghats, southern India) is unclear and warrants further investigation, and evidence that it may nest within the Sri Lankan radiation indicates a possible recolonisation event. DNA sequence data and morphology suggest that currently recognised uropeltid species diversity is substantially underestimated. Our study highlights the benefits of integrating museum collections in molecular genetic analyses and their role in understanding the systematics and evolutionary history of understudied organismal groups.

A new species of shieldtail snake (Squamata: Uropeltidae: Uropeltis) from the Bengaluru uplands, India

A new species of shieldtail snake, Uropeltis jerdoni, is here described based on eight specimens from Devarayana Durga and Nandi Durga that are under-researched hills near Bengaluru in southern India.  The new species is a member of the Uropeltis ceylanica group that can be distinguished from related taxa as follows: a truncate and flattened caudal shield with a circumscribed concave disc; part of rostral visible from above subequal to its distance from frontal; rostral partially separating nasal scales; 17: 17: 17 dorsal scale rows; 140–148 ventral scales; 7–9 pairs of subcaudals; dark blackish-grey above, powdered with minute yellow specks, yellow lateral stripes on neck and tail; ventrolateral region with yellow mottling; venter black. This new species is currently known only from two ranges Devarayana Durga and Nandi Durga but judging by the presence of similar, adjacent massifs, is hypothesized to be present in nearby hillocks surrounding Bengaluru City.

Warning signals promote morphological diversification in fossorial uropeltid snakes (Squamata: Uropeltidae)

Many species possess warning colourations that signal unprofitability to predators. Warning colourations are also thought to provide prey with a ‘predator-free space’ and promote niche expansion. However, how such strategies release a species from environmental constraints and facilitate niche expansion is not clearly understood. Fossoriality in reptiles imposes several morphological limits on head and body size to facilitate burrowing underground, but many fossorial snakes live close to the surface and occasionally move above ground, exposing them to predators. In such cases, evolving antipredator defences that reduce predation on the surface could potentially relax the morphological constraints associated with fossoriality and promote morphological diversification. Fossorial uropeltid snakes possess varying degrees of conspicuous warning colourations that reduce avian predation when active above ground. We predicted that species with more conspicuous colourations will exhibit more robust body forms and show faster rates of morphological evolution because constraints imposed by fossoriality are relaxed. Using a comparative phylogenetic approach on the genus Uropeltis, we show that more conspicuous species tend to have more robust morphologies and have faster rates of head-shape evolution. Overall, we find that the evolution of warning colourations in Uropeltis can facilitate niche expansion by influencing rates of morphological diversification.

Patterns, Mechanisms and Genetics of Speciation in Reptiles and Amphibians

In this contribution, the aspects of reptile and amphibian speciation that emerged from research performed over the past decade are reviewed. First, this study assesses how patterns and processes of speciation depend on knowing the taxonomy of the group in question, and discuss how integrative taxonomy has contributed to speciation research in these groups. This study then reviews the research on different aspects of speciation in reptiles and amphibians, including biogeography and climatic niches, ecological speciation, the relationship between speciation rates and phenotypic traits, and genetics and genomics. Further, several case studies of speciation in reptiles and amphibians that exemplify many of these themes are discussed. These include studies of integrative taxonomy and biogeography in South American lizards, ecological speciation in European salamanders, speciation and phenotypic evolution in frogs and lizards. The final case study combines genomics and biogeography in tortoises. The field of amphibian and reptile speciation research has steadily moved forward from the assessment of geographic and ecological aspects, to incorporating other dimensions of speciation, such as genetic mechanisms and evolutionary forces. A higher degree of integration among all these dimensions emerges as a goal for future research.

Conspicuous colours reduce predation rates in fossorial uropeltid snakes

Uropeltid snakes (Family Uropeltidae) are non-venomous, fossorial snakes that are found above ground occasionally, during which time they are exposed to predation. Many species are brightly coloured, mostly on the ventral surface, but these colours are expected to have no function below the ground. Observations have shown that the cephalic resemblance (resemblance to heads) of uropeltid tails may direct attacks of predators towards the hardened tails, thereby potentially increasing handling times for predators. Experiments have also shown that predators learn to avoid prey that are non-toxic and palatable but are difficult to capture, hard to process or require long handling time when such prey advertise their unprofitability through conspicuous colours. We here postulate that uropeltid snakes use their bright colours to signal long handling times associated with attack deflection to the tails, thereby securing reduced predation from predators that can learn to associate colour with handling time. Captive chicken experiments with dough models mimicking uropeltids indicate that attacks were more common on the tail than on the head. Field experiments with uropeltid clay models show that the conspicuous colours of these snakes decrease predation rates compared to cryptic models, but a novel conspicuous colour did not confer such a benefit. Overall, our experiments provide support for our hypothesis that the conspicuous colours of these snakes reduce predation, possibly because these colours advertise unprofitability due to long handling times.

Evolutionary biogeography of the centipede genus Ethmostigmus from Peninsular India: testing an ancient vicariance hypothesis for Old World tropical diversity

BACKGROUND

Understanding the relative influence of vicariance and dispersal in shaping Old World tropical biodiversity remains a challenge. We aimed to infer the roles of these alternative biogeographic processes using a species time-tree for the centipede genus Ethmostigmus from the Old World tropics. Additionally, we explored fine-scale biogeographic patterns for an endemic radiation of Ethmostigmus from the peninsular Indian Plate (PIP), an area with complex geological and climatic history.

RESULTS

Divergence time estimates suggest that Ethmostigmus began diversifying in the Late Cretaceous, 99 (± 25) million years ago (Ma), its early biogeographic history shaped by vicariance. Members of Ethmostigmus in PIP form a monophyletic group that underwent endemic radiation in the Late Cretaceous, 72 (± 25) Ma. In contrast, a new species of Ethmostigmus from north-east India formed a clade with African/Australian species. Fine-scale biogeographic analyses in PIP predict that Indian Ethmostigmus had an ancestor in southern-central parts of the Western Ghats. This was followed by four independent dispersal events from the southern-central Western Ghats to the Eastern Ghats, and between different parts of the Western Ghats in the Cenozoic.

CONCLUSIONS

Our results are consistent with Gondwanan break-up driving the early evolutionary history of the genus Ethmostigmus. Multiple dispersal events coinciding with geo-climatic events throughout the Cenozoic shaped diversification in PIP. Ethmostigmus species in PIP are restricted to wet forests and have retained that niche throughout their diversification.