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Kim D, Kim G, Shin CR, Park B, Choi EH, Hwang UW. The complete mitochondrial genome of a ground beetle Synuchus nitidus (Carabidae: Harpalinae: Sphodrini) from South Korea. Mitochondrial DNA B Resour 2024; 9:711-715. [PMID: 38855355 PMCID: PMC11159585 DOI: 10.1080/23802359.2024.2361689] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/16/2024] [Accepted: 05/25/2024] [Indexed: 06/11/2024] Open
Abstract
The ground beetle Synuchus nitidus (Motschulsky, 1861) (Carabidae: Harpalinae: Sphodrini) is one of the most common species in the forests of South Korea, which has the potential to be utilized as an environmental indicator. Here, we characterized the complete mitochondrial genome (mitogenome) of S. nitidus, which is the first in the harpaline tribe Sphodrini. Its genome is 16,392 bp in length and composed of 13 protein-coding genes (PCGs), 22 tRNA genes, two rRNA genes, and an A + T rich region. In addition, we reconstructed a maximum likelihood tree to elucidate the phylogenetic position of Sphodrini among the seven harpaline tribes using nucleotide sequences of the 13 PCGs. The ML tree supported a monophyletic clade of the subfamily Harpalinae and showed a close relationship between Sphodrini and Lebinii with a low bootstrap value. The complete mitogenome of S. nitidus could be helpful for molecular species identification and exploring phylogenetic relationships among carabids.
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Affiliation(s)
- Dooyoung Kim
- Department of Biomedical Convergence Science and Technology, School of Industrial Technology Advances, Kyungpook National University, Daegu, South Korea
| | - Gyeongmin Kim
- School of Life Sciences, Graduate School, Kyungpook National University, Daegu, South Korea
| | - Cho Rong Shin
- Department of Biomedical Convergence Science and Technology, School of Industrial Technology Advances, Kyungpook National University, Daegu, South Korea
| | - Bia Park
- Department of Biology Education, Teachers College & Institute for Phylogenomics and Evolution, Kyungpook National University, Daegu, South Korea
| | - Eun Hwa Choi
- Department of Biology Education, Teachers College & Institute for Phylogenomics and Evolution, Kyungpook National University, Daegu, South Korea
- Phylomics Inc, Daegu, South Korea
| | - Ui Wook Hwang
- Department of Biomedical Convergence Science and Technology, School of Industrial Technology Advances, Kyungpook National University, Daegu, South Korea
- Department of Biology Education, Teachers College & Institute for Phylogenomics and Evolution, Kyungpook National University, Daegu, South Korea
- Phylomics Inc, Daegu, South Korea
- Institute for Korean Herb-Bio Convergence Promotion, Kyungpook National University, Daegu, South Korea
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Villastrigo A, Deharveng L, Balke M. New Caledonia's enigmatic terrestrial diving beetle
Typhlodessus monteithi
is a derived species of
Paroster. ZOOL SCR 2023. [DOI: 10.1111/zsc.12581] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/26/2023]
Affiliation(s)
- Adrián Villastrigo
- Division of Entomology SNSB‐Zoologische Staatssammlung München Munich Germany
| | - Louis Deharveng
- Institut de Systématique, Evolution, Biodiversité (ISYEB), CNRS UMR 7205, MNHN, UPMC, EPHE, Museum national d'Histoire naturelle Sorbonne Université Paris France
| | - Michael Balke
- Division of Entomology SNSB‐Zoologische Staatssammlung München Munich Germany
- GeoBioCenter Ludwig Maximilians University Munich Germany
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