Lifetime of the excited state in vivo. II. Bacteriochlorophyll in photosynthetic bacteria at room temperature

Phycobilisome light-harvesting efficiency in natural populations of the marine cyanobacteria Synechococcus increases with depth

Cyanobacteria of the genus Synechococcus play a key role as primary producers and drivers of the global carbon cycle in temperate and tropical oceans. Synechococcus use phycobilisomes as photosynthetic light-harvesting antennas. These contain phycoerythrin, a pigment-protein complex specialized for absorption of blue light, which penetrates deep into open ocean water. As light declines with depth, Synechococcus photo-acclimate by increasing both the density of photosynthetic membranes and the size of the phycobilisomes. This is achieved with the addition of phycoerythrin units, as demonstrated in laboratory studies. In this study, we probed Synechococcus populations in an oligotrophic water column habitat at increasing depths. We observed morphological changes and indications for an increase in phycobilin content with increasing depth, in summer stratified Synechococcus populations. Such an increase in antenna size is expected to come at the expense of decreased energy transfer efficiency through the antenna, since energy has a longer distance to travel. However, using fluorescence lifetime depth profile measurement approach, which is applied here for the first time, we found that light-harvesting quantum efficiency increased with depth in stratified water column. Calculated phycobilisome fluorescence quantum yields were 3.5% at 70 m and 0.7% at 130 m. Under these conditions, where heat dissipation is expected to be constant, lower fluorescence yields correspond to higher photochemical yields. During winter-mixing conditions, Synechococcus present an intermediate state of light harvesting, suggesting an acclimation of cells to the average light regime through the mixing depth (quantum yield of ~2%). Given this photo-acclimation strategy, the primary productivity attributed to marine Synechococcus should be reconsidered.

Probing the population of the cyanobacterium Synechococcus in an oligotrophic water column habitat at increasing depths reveals that light-harvesting quantum efficiency increases with depth.

Fast delocalization leads to robust long-range excitonic transfer in a large quantum chlorosome model

Chlorosomes are efficient light-harvesting antennas containing up to hundreds of thousands of bacteriochlorophyll molecules. With massively parallel computer hardware, we use a nonperturbative stochastic Schrödinger equation, while including an atomistically derived spectral density, to study excitonic energy transfer in a realistically sized chlorosome model. We find that fast short-range delocalization leads to robust long-range transfer due to the antennae's concentric-roll structure. Additionally, we discover anomalous behavior arising from different initial conditions, and outline general considerations for simulating excitonic systems on the nanometer to micrometer scale.

Light collection and harvesting processes in bacterial photosynthesis investigated on a picosecond time scale

Fluorescence lifetimes have been determined for four strains of Rhodopseudomonas sphaeroides. Chromatophore samples were excited with a single picosecond flash, and the fluorescence was detected with a streak camera. The decay times are 100 psec in strains 2.4.1 and Ga, and 300 psec in the carotenoidless strain R-26. These times are related to the transfer of energy from the light-harvesting antenna pigment molecules to the photochemical reaction center. In strain PM-8 dpl, which lacks reaction centers, the lifetime is 1.1 nsec. In addition, we have obtained curves relating the quantum yield of fluorescence to the photon density of the excitation pulse. These curves can be fit with a simple model that relates excitonic processes to properties of the photosynthetic unit and that qualitatively describes differences between the mutant strains.

Autoregressive-model-based fluorescence-lifetime measurements by phase-modulation fluorometry using a pulsed-excitation light source and a high-gain photomultiplier tube

We propose a novel method for measuring fluorescence lifetimes by use of a pulsed-excitation light source and an ordinary or a high-gain photomultiplier tube (PMT) with a high-load resistor. In order to obtain the values of fluorescence lifetimes, we adopt a normal data-processing procedure used in phase-modulation fluorometry. We apply an autoregressive (AR)-model-based data-analysis technique to fluorescence- and reference-response time-series data obtained from the PMT in order to derive plural values of phase differences at a repetition frequency of the pulsed-excitation light source and its harmonic ones. The connection of the high-load resistor enhances sensitivity in signal detection in a certain condition. Introduction of the AR-model-based data-analysis technique improves precision in estimating the values of fluorescence lifetimes. Depending on the value of the load resistor and that of the repetition frequency, plural values of fluorescence lifetimes are obtained at one time by utilizing the phase information of harmonic frequencies. Because the proposed measurement system is simple to construct, it might be effective when we need to know approximate values of fluorescence lifetimes readily, such as in the field of biochemistry for a screening purpose.

Phase-modulation fluorometer using a dynode-voltage burst-modulated photomultiplier tube

We propose a new scheme for a phase-modulation fluorometer (PMF) in which a photomultiplier tube (PMT) is used as a photo detector whose gain is modulated sinusoidally with a burst signal of period T and duty ratio 0.5. The carrier wave of the burst modulation signal is synchronized with an incident fluorescence signal. In order to modulate the gain of the PMT, one of the dynodes in the PMT was deeply biased and the burst signal was superimposed. Because the fluorescence signal is converted to a direct current (dc) signal by the PMT internal modulation, we can make the value of the load resistance of the PMT relatively large under the condition tau < or = T/2, where tau is a time constant of a low-pass filter attached to the output of the PMT. The proposed scheme brings about advantages in sensitivity and noise immunity in detecting weak fluorescence in comparison with those of the conventional PMF. The combined technique of the burst modulation of the gain of the PMT and the alternating current (ac) signal detection alleviates the influence of the background light.