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Cerreia Vioglio P, Catalano L, Vasylyeva V, Nervi C, Chierotti MR, Resnati G, Gobetto R, Metrangolo P. Natural Abundance 15 N and 13 C Solid-State NMR Chemical Shifts: High Sensitivity Probes of the Halogen Bond Geometry. Chemistry 2016; 22:16819-16828. [PMID: 27709719 DOI: 10.1002/chem.201603392] [Citation(s) in RCA: 30] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/18/2016] [Indexed: 01/21/2023]
Abstract
Solid-state nuclear magnetic resonance (SSNMR) spectroscopy is a versatile characterization technique that can provide a plethora of information complementary to single crystal X-ray diffraction (SCXRD) analysis. Herein, we present an experimental and computational investigation of the relationship between the geometry of a halogen bond (XB) and the SSNMR chemical shifts of the non-quadrupolar nuclei either directly involved in the interaction (15 N) or covalently bonded to the halogen atom (13 C). We have prepared two series of X-bonded co-crystals based upon two different dipyridyl modules, and several halobenzenes and diiodoalkanes, as XB-donors. SCXRD structures of three novel co-crystals between 1,2-bis(4-pyridyl)ethane, and 1,4-diiodobenzene, 1,6-diiodododecafluorohexane, and 1,8-diiodohexadecafluorooctane were obtained. For the first time, the change in the 15 N SSNMR chemical shifts upon XB formation is shown to experimentally correlate with the normalized distance parameter of the XB. The same overall trend is confirmed by density functional theory (DFT) calculations of the chemical shifts. 13 C NQS experiments show a positive, linear correlation between the chemical shifts and the C-I elongation, which is an indirect probe of the strength of the XB. These correlations can be of general utility to estimate the strength of the XB occurring in diverse adducts by using affordable SSNMR analysis.
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Affiliation(s)
- Paolo Cerreia Vioglio
- Department of Chemistry and NIS centre, University of Torino, Via P. Giuria 7, 10125, Torino, Italy
| | - Luca Catalano
- NFMLab-D.C.M.I.C. "Giulio Natta", Politecnico di Milano, Via L. Mancinelli 7, 20131, Milano, Italy
| | - Vera Vasylyeva
- NFMLab-D.C.M.I.C. "Giulio Natta", Politecnico di Milano, Via L. Mancinelli 7, 20131, Milano, Italy
| | - Carlo Nervi
- Department of Chemistry and NIS centre, University of Torino, Via P. Giuria 7, 10125, Torino, Italy
| | - Michele R Chierotti
- Department of Chemistry and NIS centre, University of Torino, Via P. Giuria 7, 10125, Torino, Italy
| | - Giuseppe Resnati
- NFMLab-D.C.M.I.C. "Giulio Natta", Politecnico di Milano, Via L. Mancinelli 7, 20131, Milano, Italy
| | - Roberto Gobetto
- Department of Chemistry and NIS centre, University of Torino, Via P. Giuria 7, 10125, Torino, Italy
| | - Pierangelo Metrangolo
- NFMLab-D.C.M.I.C. "Giulio Natta", Politecnico di Milano, Via L. Mancinelli 7, 20131, Milano, Italy.,VTT-Technical Research Centre of Finland, Biologinkuja 7, 02150, Espoo, Finland
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Tatton AS, Pham TN, Vogt FG, Iuga D, Edwards AJ, Brown SP. Probing Hydrogen Bonding in Cocrystals and Amorphous Dispersions Using 14N–1H HMQC Solid-State NMR. Mol Pharm 2013; 10:999-1007. [DOI: 10.1021/mp300423r] [Citation(s) in RCA: 104] [Impact Index Per Article: 9.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Andrew S. Tatton
- Department
of Physics, University of Warwick, Coventry
CV4 7AL, United Kingdom
| | - Tran N. Pham
- GlaxoSmithKline plc, Product Development, Gunnels Wood Road, Stevenage
SG1 2NY, United Kingdom
| | - Frederick G. Vogt
- GlaxoSmithKline plc, Product Development, 709 Swedeland
Road, King of Prussia, Pennsylvania
19406, United States
| | - Dinu Iuga
- Department
of Physics, University of Warwick, Coventry
CV4 7AL, United Kingdom
| | - Andrew J. Edwards
- GlaxoSmithKline plc, Product Development, Gunnels Wood Road, Stevenage
SG1 2NY, United Kingdom
| | - Steven P. Brown
- Department
of Physics, University of Warwick, Coventry
CV4 7AL, United Kingdom
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Gester RM, Georg HC, Fonseca TL, Provasi PF, Canuto S. A simple analysis of the influence of the solvent-induced electronic polarization on the 15N magnetic shielding of pyridine in water. Theor Chem Acc 2012. [DOI: 10.1007/s00214-012-1220-0] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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González JA, de la Fuente IG, Mozo I, Cobos JC, Riesco N. Thermodynamics of Organic Mixtures Containing Amines. VII. Study of Systems Containing Pyridines in Terms of the Kirkwood−Buff Formalism. Ind Eng Chem Res 2008. [DOI: 10.1021/ie071226e] [Citation(s) in RCA: 20] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Juan Antonio González
- G.E.T.E.F. Dpto Termodinámica y Física Aplicada, Facultad de Ciencias, Universidad de Valladolid, Valladolid, 47071 Spain
| | - Isaías García de la Fuente
- G.E.T.E.F. Dpto Termodinámica y Física Aplicada, Facultad de Ciencias, Universidad de Valladolid, Valladolid, 47071 Spain
| | - Ismael Mozo
- G.E.T.E.F. Dpto Termodinámica y Física Aplicada, Facultad de Ciencias, Universidad de Valladolid, Valladolid, 47071 Spain
| | - José Carlos Cobos
- G.E.T.E.F. Dpto Termodinámica y Física Aplicada, Facultad de Ciencias, Universidad de Valladolid, Valladolid, 47071 Spain
| | - Nicolás Riesco
- Department of Chemical Engineering, Loughborough University, Loughborough, LE113TU Leicestershire, United Kingdom
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Esrafili MD, Elmi F, Hadipour NL. Density functional theory investigation of hydrogen bonding effects on the oxygen, nitrogen and hydrogen electric field gradient and chemical shielding tensors of anhydrous chitosan crystalline structure. J Phys Chem A 2007; 111:963-70. [PMID: 17266238 DOI: 10.1021/jp066761r] [Citation(s) in RCA: 33] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/08/2023]
Abstract
A systematic computational investigation was carried out to characterize the 17O, 14N and 2H electric field gradient, EFG, as well as 17O, 15N, 13C and 1H chemical shielding tensors in the anhydrous chitosan crystalline structure. To include the hydrogen-bonding effects in the calculations, the most probable interacting molecules with the target molecule in the crystalline phase were considered through a hexameric cluster. The computations were performed with the B3LYP method and 6-311++G(d,p) and 6-31++G(d,p) standard basis sets using the Gaussian 98 suite of programs. Calculated EFG and chemical shielding tensors were used to evaluate the 17O, 14N and 2H nuclear quadrupole resonance, NQR, and 17O, 15N, 13C and 1H nuclear magnetic resonance, NMR, parameters in the hexameric cluster, which are in good agreement with the available experimental data. The difference between the calculated NQR and NMR parameters of the monomer and hexamer cluster shows how much hydrogen bonding interactions affect the EFG and chemical shielding tensors of each nucleus. These results indicate that both O(3)-H(33)...O(5-3) and N-H(22)...O(6-4) hydrogen bonding have a major influence on NQR and NMR parameters. Also, the quantum chemical calculations indicate that the intra- and intermolecular hydrogen bonding interactions play an essential role in determining the relative orientation of EFG and chemical shielding principal components in the molecular frame axes.
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Affiliation(s)
- Mehdi D Esrafili
- Department of Chemistry, Tarbiat Modares University, P.O. Box 14115-175, Tehran, Iran
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Wu G, Yamada K. Determination of the 17O NMR tensors in potassium hydrogen dibenzoate: a salt containing a short O...H...O hydrogen bond. SOLID STATE NUCLEAR MAGNETIC RESONANCE 2003; 24:196-208. [PMID: 12943914 DOI: 10.1016/s0926-2040(03)00046-8] [Citation(s) in RCA: 24] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/24/2023]
Abstract
Solid-state 17O NMR spectra were obtained at 4.70, 11.75 and 19.60T for potassium hydrogen [17O(4)]dibenzoate (PHB) under both magic-angle spinning and stationary conditions. Spectral analyses yielded both the magnitude and orientation of the 17O chemical shift (CS) tensor and the electric field gradient (EFG) tensor for each of the two chemically distinct oxygen sites in PHB. For the oxygen site that is not involved in hydrogen bonding, the experimental 17O NMR tensors are: delta(iso)=287+/-2 ppm, delta(11)=470+/-5 ppm, delta(22)=380+/-5 ppm, delta(33)=10+/-5 ppm, C(Q)=8.30+/-0.02 MHz, eta(Q)=0.23+/-0.05, alpha=0+/-5 degrees, beta=90+/-5 degrees, and gamma=30+/-5 degrees. For the oxygen site in the short O...H...O hydrogen bond, the experimental 17O NMR tensors are: delta(iso)=213+/-2 ppm, delta(11)=370+/-5 ppm, delta(22)=190+/-5 ppm, delta(33)=80+/-5 ppm, C(Q)=5.90+/-0.02 MHz, eta(Q)=0.55+/-0.05, alpha=5+/-5 degrees, beta=90+/-5 degrees, and gamma=90+/-5 degrees. Extensive quantum mechanical calculations at both restricted Hartree-Fock and density functional theory levels were performed to investigate the effects of an effectively symmetrical O...H...O hydrogen bond on 17O CS and EFG tensors.
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Affiliation(s)
- Gang Wu
- Department of Chemistry, Queen's University, Kingston, Ont., Canada K7L 3N6.
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Strohmeier M, Stueber D, Grant DM. Accurate 13C and 15N Chemical Shift and 14N Quadrupolar Coupling Constant Calculations in Amino Acid Crystals: Zwitterionic, Hydrogen-Bonded Systems. J Phys Chem A 2003; 107:7629-42. [DOI: 10.1021/jp0350114] [Citation(s) in RCA: 56] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Mark Strohmeier
- Department of Chemistry, University of Utah, 315 South 1400 East, Salt Lake City, Utah 84112-0850
| | - Dirk Stueber
- Department of Chemistry, University of Utah, 315 South 1400 East, Salt Lake City, Utah 84112-0850
| | - David M. Grant
- Department of Chemistry, University of Utah, 315 South 1400 East, Salt Lake City, Utah 84112-0850
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Strohmeier M, Orendt AM, Alderman DW, Grant DM. Investigation of the polymorphs of dimethyl-3,6-dichloro-2,5-dihydroxyterephthalate by (13)C solid-state NMR spectroscopy. J Am Chem Soc 2001; 123:1713-22. [PMID: 11456772 DOI: 10.1021/ja003599b] [Citation(s) in RCA: 32] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
Two of the three conformational polymorphs of dimethyl-3,6-dichloro-2,5-dihydroxyterephthalate are studied by solid-state NMR techniques. The structural differences between the polymorphs have previously been studied by X-ray. In these two polymorphs named white and yellow due to their color, the major structural difference is the torsional angle between the ester group and the aromatic ring. The yellow form has a dihedral angle of 4 degrees between the plane of the aromatic ring and the plane of the ester group, while the white form has two different molecules per unit cell with dihedral angles of 70 degrees and 85 degrees. This change greatly affects the conjugation in the pi-electronic system. In addition, there are differences in the hydrogen-bonding patterns, with the white form having intermolecular hydrogen bonds and the yellow form having intramolecular hydrogen bonds. In this work, the carbon isotropic chemical shift values and the chlorine electric field gradient (EFG) tensor information are extracted from the (13)C MAS spectra, and the principal values of the chemical shift tensors of the carbons are obtained from 2D FIREMAT experiments. Quantum chemical calculations of the chemical shift tensor data as well as the EFG tensor are performed at the HF and DFT levels of theory on individual molecules and on stacks of three molecules to account for the important intermolecular interactions in the white form. The differences between the spectral data on the two polymorphs are discussed in terms of the known electronic and structural differences.
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Affiliation(s)
- M Strohmeier
- Department of Chemistry, University of Utah, 315 South 1400 East, Salt Lake City, Utah 84112-0850, USA
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Dong S, Ida R, Wu G. A Combined Experimental and Theoretical 17O NMR Study of Crystalline Urea: An Example of Large Hydrogen-bonding Effects. J Phys Chem A 2000. [DOI: 10.1021/jp002293o] [Citation(s) in RCA: 80] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Shuan Dong
- Department of Chemistry, Queen's University, Kingston, Ontario, Canada K7L 3N6
| | - Ramsey Ida
- Department of Chemistry, Queen's University, Kingston, Ontario, Canada K7L 3N6
| | - Gang Wu
- Department of Chemistry, Queen's University, Kingston, Ontario, Canada K7L 3N6
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