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Mathews JA, Ni YG, Wang C, Peterson JE, Ray C, Zhao X, Duan D, Hamon S, Allinson J, Hokom M, Wegner G. Considerations for Soluble Protein Biomarker Blood Sample Matrix Selection. AAPS JOURNAL 2020; 22:38. [PMID: 31997095 DOI: 10.1208/s12248-020-0412-0] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/15/2019] [Accepted: 12/23/2019] [Indexed: 11/30/2022]
Abstract
Blood-based soluble protein biomarkers provide invaluable clinical information about patients and are used as diagnostic, prognostic, and pharmacodynamic markers. The most commonly used blood sample matrices are serum and different types of plasma. In drug development research, the impact of sample matrix selection on successful protein biomarker quantification is sometimes overlooked. The sample matrix for a specific analyte is often chosen based on prior experience or literature searches, without good understanding of the possible effects on analyte quantification. Using a data set of 32 different soluble protein markers measured in matched serum and plasma samples, we examined the differences between serum and plasma and discussed how platelet or immune cell activation can change the quantified concentration of the analyte. We have also reviewed the effect of anticoagulant on analyte quantification. Finally, we provide specific recommendations for biomarker sample matrix selection and propose a systematic and data-driven approach for sample matrix selection. This review is intended to raise awareness of the impact and considerations of sample matrix selection on biomarker quantification.
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Affiliation(s)
- Joel A Mathews
- Ionis Pharmaceuticals, 2855 Gazelle Rd., Carlsbad, California, 92010, USA.
| | - Yan G Ni
- Regeneron, Tarrytown, New York, USA
| | | | | | - Chad Ray
- Zoetis, Kalamazoo, Michigan, USA
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Litzman J, Chovancová Z, Bejdák P, Litzman M, Hel Z, Vlková M. Common variable immunodeficiency patients display elevated plasma levels of granulocyte activation markers elastase and myeloperoxidase. Int J Immunopathol Pharmacol 2019; 33:2058738419843381. [PMID: 30968712 PMCID: PMC6458674 DOI: 10.1177/2058738419843381] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/03/2022] Open
Abstract
Common variable immunodeficiency disorders (CVIDs) represent a group of primary immunodeficiency diseases characterized by hypogammaglobulinemia and dysfunctional immune response to invading pathogens. Previous studies have indicated that CVID is associated with microbial translocation and systemic myeloid cell activation. The goal of this study was to determine whether patients with CVID display elevated systemic levels of markers of granulocyte activation and whether the levels are further influenced by intravenous immunoglobulin (IVIg) infusions. The plasma levels of granulocyte activation markers elastase and myeloperoxidase were determined using enzyme-linked immunosorbent assay (ELISA) in 46 CVID patients and 44 healthy controls. All CVID patients were in a stable state with no apparent acute infection. In addition, granulocyte activation markers’ plasma levels in 24 CVID patients were determined prior to and 1 h following IVIg administration. Neutrophil elastase and myeloperoxidase plasma levels were significantly higher in CVID patients than in healthy controls. Systemic elastase levels were further increased following IVIg administration. In vitro stimulation of 13 CVID patients’ whole blood using IVIg in a therapeutically relevant dose for 2 h resulted in a significant increase in plasma elastase levels compared to unstimulated blood. The data presented here indicate that CVID is associated with chronic granulocytic activation which is further exacerbated by administering IVIg. Increased myeloperoxidase and elastase levels may contribute to associated comorbidities in CVID patients.
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Affiliation(s)
- Jiří Litzman
- 1 Department of Clinical Immunology and Allergology, St. Anne's University Hospital, Brno, Czech Republic.,2 Department of Clinicla Immunology and Allergology, Faculty of Medicine, Masaryk University, Brno, Czech Republic
| | - Zita Chovancová
- 1 Department of Clinical Immunology and Allergology, St. Anne's University Hospital, Brno, Czech Republic.,2 Department of Clinicla Immunology and Allergology, Faculty of Medicine, Masaryk University, Brno, Czech Republic
| | - Petr Bejdák
- 1 Department of Clinical Immunology and Allergology, St. Anne's University Hospital, Brno, Czech Republic.,2 Department of Clinicla Immunology and Allergology, Faculty of Medicine, Masaryk University, Brno, Czech Republic
| | - Marek Litzman
- 3 Department of Economics, Faculty of Business and Economics, Mendel University in Brno, Brno, Czech Republic
| | - Zdeněk Hel
- 4 Departments of Pathology and Microbiology, The University of Alabama at Birmingham, Birmingham, AL, USA
| | - Marcela Vlková
- 1 Department of Clinical Immunology and Allergology, St. Anne's University Hospital, Brno, Czech Republic.,2 Department of Clinicla Immunology and Allergology, Faculty of Medicine, Masaryk University, Brno, Czech Republic
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Findeisen P, Sismanidis D, Riedl M, Costina V, Neumaier M. Preanalytical Impact of Sample Handling on Proteome Profiling Experiments with Matrix-Assisted Laser Desorption/Ionization Time-of-Flight Mass Spectrometry. Clin Chem 2005; 51:2409-11. [PMID: 16306114 DOI: 10.1373/clinchem.2005.054585] [Citation(s) in RCA: 51] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Affiliation(s)
- Peter Findeisen
- Institute for Clinical Chemistry, Medical Faculty Mannheim of the University of Heidelberg, Germany.
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