Mutagenic analysis of AMP nucleosidase from Escherichia coli. Deletion of a region similar to AMP deaminase and peptide characterization by mass spectrometry

Sequence-ion enhancement of peptides digested with proteinase K

Proteinase K has been employed to proteolyze peptides before their mass spectrometric analysis. This combination of the two methods yields abundant sequence ions in the mass spectrum, thus leading to an easy prediction of the primary structure of the peptide. It was found that both the variety of available sequence ions and also their abundances are increased strongly after proteinase K digestion, when compared with the normal mass spectrum. The shortcoming of little fragmentation encountered using conventional mass spectrometric ionization methods can mostly be overcome. The H'n and Y"m ions produced from proteolysis provided a double check of the peptide sequence.

High-accuracy mass measurement as a tool for studying proteins

Electrospray ionization and matrix-assisted laser desorption/ionization, two new mass spectroscopy methods for the accurate measurement of molecular masses of individual peptide and protein molecules, are finding great utility for the solution of problems in biological research. Thus, mass spectrometry is being used for the rapid identification and detailed characterization of proteins, the determination of modifications in proteins, and the assessment of the integrity and purity of (native, recombinant, or synthetic) protein preparations. Recent data indicate that mass spectrometry can contribute significantly to the study of protein interactions and even to the investigation of aspects of protein folding and conformation.