Closely related alpha-tropomyosin mRNAs in quail fibroblasts and skeletal muscle cells

Structure and complete nucleotide sequence of the gene encoding rat fibroblast tropomyosin 4

We have isolated and determined the complete nucleotide sequence of the gene that encodes the 248 amino acid residue fibroblast tropomyosin, TM-4. The TM-4 sequence is encoded by eight exons, which span approximately 16,000 bases. The position of the intron-exon splice junctions relative to the final transcript are identical to those present in other vertebrate tropomyosin genes and the Drosophila melanogaster TMII gene. We have found no evidence that the rat TM-4 gene is alternatively spliced, unlike all the other tropomyosin genes from multicellular organisms that have been described. Typical vertebrate tropomyosin genes contain some, or all, of alternatively spliced exons 1a and 1b, 2a and 2b, 6a and 6b, and 9a, 9b, 9c and 9d in addition to common exons 3, 4, 5, 7 and 8. The rat fibroblast TM-4 mRNA is encoded by sequences most similar to exons 1b, 3, 4, 5, 6b, 7, 8 and 9d. Two exon-like sequences that are highly similar to alternatively spliced exons 2b and 9a of the rat beta-tropomyosin gene and the human TMnm gene have been located in the appropriate region of the gene encoding rat fibroblast TM-4. However, several mutations in these sequences render them non-functional as tropomyosin coding exons. We have termed these exon-like sequences, vestigial exons. The evolutionary relationship of the rat TM-4 gene relative to other vertebrate tropomyosin genes is discussed.

Tissue-specific transcriptional control of alpha- and beta-tropomyosins in chicken muscle development

During muscle maturation, isoform switching of contractile proteins to attain the adult phenotype involves both stage-specific and muscle-specific regulatory mechanisms. Chicken pectoralis major (PM) provides an interesting model to study the latter since a specific pattern of tropomyosin (TM) with repression of the beta TM isoform is displayed by the adult PM. The developmental pattern of alpha and beta fast skeletal muscle tropomyosins' (alpha f and beta TM) RNAs was investigated with 3' untranslated region specific probes. In PM, the beta TM messenger ceased to accumulate after hatching through a transcriptional control, as shown by run-on assays, so that, at Day 8 ex ovo, no beta TM mRNA was detected. In this same muscle, in parallel with the disappearance of the beta TM mRNA, there was a boost in the accumulation of the alpha f TM mRNA. In the leg muscles, following hatching, there was only a moderate increase in the level of the alpha f TM mRNA, together with a slight decrease in the accumulation of the beta TM mRNA. Taken together, these results show that chicken muscle maturation involves tissue-specific transcriptional control of tropomyosin genes and could suggest a possible coordinate regulation of the two genes.

Organization of the hTMnm gene. Implications for the evolution of muscle and non-muscle tropomyosins

We have isolated clones of human genomic DNA which contain the structural elements of the hTMnm gene. In non-muscle tissue this gene produces a 2.5 kb (1 kb = 10(3) bases or base-pairs) mRNA encoding TM30nm, a 248 amino acid cytoskeletal tropomyosin. In muscle, alternative splicing of this gene results in the expression of a 1.3 kb mRNA encoding a 285 amino acid skeletal muscle alpha-tropomyosin. The hTMnm gene spans at least 42 kb of DNA and consists of 13 exons, only five of which are common to both the 2.5 kb and 1.3 kb transcripts. The boundaries of the exons giving rise to the muscle-specific isoform are identical to the base to those of other genes encoding muscle tropomyosins. A comparison of the structures of exons encoding the amino-terminal sequences of the muscle and non-muscle isoforms suggests that the hTMnm gene has evolved by a specific pattern of exon duplication with alternative splicing.