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Xiao Y, Chen Q, Guang C, Zhang W, Mu W. An overview on biological production of functional lactose derivatives. Appl Microbiol Biotechnol 2019; 103:3683-3691. [DOI: 10.1007/s00253-019-09755-6] [Citation(s) in RCA: 27] [Impact Index Per Article: 5.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/12/2019] [Revised: 03/05/2019] [Accepted: 03/08/2019] [Indexed: 12/30/2022]
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Blanco-Míguez A, Blanco G, Gutierrez-Jácome A, Fdez-Riverola F, Sánchez B, Lourenço A. Computational prediction of the bioactivity potential of proteomes based on expert knowledge. J Biomed Inform 2019; 91:103121. [PMID: 30738947 DOI: 10.1016/j.jbi.2019.103121] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/27/2022]
Abstract
Advances in the field of genome sequencing have enabled a comprehensive analysis and annotation of the dynamics of the protein inventory of cells. This has been proven particularly rewarding for microbial cells, for which the majority of proteins are already accessible to analysis through automatic metagenome annotation. The large-scale in silico screening of proteomes and metaproteomes is key to uncover bioactivities of translational, clinical and biotechnological interest, and to help assign functions to certain proteins, such as those predicted as hypothetical. This work introduces a new method for the prediction of the bioactivity potential of proteomes/metaproteomes, supporting the discovery of functionally relevant proteins based on prior knowledge. This methodology complements functional annotation enrichment methods by allowing the assignment of functions to proteins annotated as hypothetical/putative/uncharacterised, as well as and enabling the detection of specific bioactivities and the recovery of proteins from defined taxa. This work shows how the new method can be applied to screen proteome and metaproteome sets to obtain predictions of clinical or biotechnological interest based on reference datasets. Notably, with this methodology, the large information files obtained after DNA sequencing or protein identification experiments can be associated for translational purposes that, in cases such as antibiotic-resistance pathogens or foodborne diseases, may represent changes in how these important and global health burdens are approached in the clinical practice. Finally, the Sequence-based Expert-driven pRoteome bioactivity Prediction EnvironmENT, a public Web service implemented in Scala functional programming style, is introduced as means to ensure broad access to the method as well as to discuss main implementation issues, such as modularity, extensibility and interoperability.
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Affiliation(s)
- Aitor Blanco-Míguez
- ESEI: Escuela Superior de Ingeniería Informática, University of Vigo, Edificio Politécnico, Campus Universitario As Lagoas, s/n, 32004 Ourense, Spain; CINBIO - Centro de Investigaciones Biomédicas, University of Vigo, Campus Universitario Lagoas-Marcosende, 36310 Vigo, Spain; Department of Microbiology and Biochemistry of Dairy Products, Instituto de Productos Lácteos de Asturias (IPLA), Consejo Superior de Investigaciones Científicas (CSIC), Paseo Río Linares, S/N, 33300 Villaviciosa, Asturias, Spain
| | - Guillermo Blanco
- ESEI: Escuela Superior de Ingeniería Informática, University of Vigo, Edificio Politécnico, Campus Universitario As Lagoas, s/n, 32004 Ourense, Spain; CINBIO - Centro de Investigaciones Biomédicas, University of Vigo, Campus Universitario Lagoas-Marcosende, 36310 Vigo, Spain; Department of Microbiology and Biochemistry of Dairy Products, Instituto de Productos Lácteos de Asturias (IPLA), Consejo Superior de Investigaciones Científicas (CSIC), Paseo Río Linares, S/N, 33300 Villaviciosa, Asturias, Spain
| | - Alberto Gutierrez-Jácome
- ESEI: Escuela Superior de Ingeniería Informática, University of Vigo, Edificio Politécnico, Campus Universitario As Lagoas, s/n, 32004 Ourense, Spain
| | - Florentino Fdez-Riverola
- ESEI: Escuela Superior de Ingeniería Informática, University of Vigo, Edificio Politécnico, Campus Universitario As Lagoas, s/n, 32004 Ourense, Spain; CINBIO - Centro de Investigaciones Biomédicas, University of Vigo, Campus Universitario Lagoas-Marcosende, 36310 Vigo, Spain; SING Research Group, Galicia Sur Health Research Institute (IIS Galicia Sur), SERGAS-UVIGO, Hospital Álvaro Cunqueiro, 36312 Vigo, Spain
| | - Borja Sánchez
- Department of Microbiology and Biochemistry of Dairy Products, Instituto de Productos Lácteos de Asturias (IPLA), Consejo Superior de Investigaciones Científicas (CSIC), Paseo Río Linares, S/N, 33300 Villaviciosa, Asturias, Spain
| | - Anália Lourenço
- ESEI: Escuela Superior de Ingeniería Informática, University of Vigo, Edificio Politécnico, Campus Universitario As Lagoas, s/n, 32004 Ourense, Spain; CINBIO - Centro de Investigaciones Biomédicas, University of Vigo, Campus Universitario Lagoas-Marcosende, 36310 Vigo, Spain; SING Research Group, Galicia Sur Health Research Institute (IIS Galicia Sur), SERGAS-UVIGO, Hospital Álvaro Cunqueiro, 36312 Vigo, Spain; CEB - Centre of Biological Engineering, University of Minho, Campus de Gualtar, 4710-057 Braga, Portugal.
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Kirtel O, Menéndez C, Versluys M, Van den Ende W, Hernández L, Toksoy Öner E. Levansucrase from Halomonas smyrnensis AAD6T: first halophilic GH-J clan enzyme recombinantly expressed, purified, and characterized. Appl Microbiol Biotechnol 2018; 102:9207-9220. [DOI: 10.1007/s00253-018-9311-z] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/13/2018] [Revised: 08/03/2018] [Accepted: 08/06/2018] [Indexed: 12/21/2022]
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Synthesis of Lactosucrose Using a Recombinant Levansucrase from Brenneria goodwinii. Appl Biochem Biotechnol 2018; 186:292-305. [DOI: 10.1007/s12010-018-2743-1] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/11/2018] [Accepted: 03/18/2018] [Indexed: 12/20/2022]
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Perspectives on the biotechnological production and potential applications of lactosucrose: A review. J Funct Foods 2015. [DOI: 10.1016/j.jff.2015.09.014] [Citation(s) in RCA: 38] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022] Open
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Li W, Yu S, Zhang T, Jiang B, Stressler T, Fischer L, Mu W. Efficient Biosynthesis of Lactosucrose from Sucrose and Lactose by the Purified Recombinant Levansucrase from Leuconostoc mesenteroides B-512 FMC. JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY 2015; 63:9755-9763. [PMID: 26487543 DOI: 10.1021/acs.jafc.5b03648] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/05/2023]
Abstract
Lactosucrose, a rare trisaccharide formed from sucrose and lactose by enzymatic transglycosylation, is a type of indigestible carbohydrate with a good prebiotic effect. In this study, lactosucrose biosynthesis was efficiently carried out by a purified levansucrase from Leuconostoc mesenteroides B-512. The target gene was cloned and expressed in Escherichia coli, and the recombinant enzyme was purified to homogeneity by nickel affinity and gel filtration chromatography. The effects of pH, temperature, substrate concentration, substrate ratio, and enzyme amount on lactosucrose biosynthesis were studied in detail, and the optimized conditions were determined to be pH 6.5, 50 °C, 27% (W/V) sucrose, 27% (W/V) lactose, and 5 U mL(-1) of the purified recombinant enzyme. Under the optimized reaction conditions, the maximal lactosucrose yield reached 224 g L(-1) after reaction for 1 h. Therefore, L. mesenteroides levansucrase could be considered a potential candidate for future industrial production of lactosucrose.
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Affiliation(s)
- Wenjing Li
- State Key Laboratory of Food Science and Technology, Jiangnan University , Wuxi, Jiangsu 214122, People's Republic of China
| | - Shuhuai Yu
- State Key Laboratory of Food Science and Technology, Jiangnan University , Wuxi, Jiangsu 214122, People's Republic of China
| | - Tao Zhang
- State Key Laboratory of Food Science and Technology, Jiangnan University , Wuxi, Jiangsu 214122, People's Republic of China
| | - Bo Jiang
- State Key Laboratory of Food Science and Technology, Jiangnan University , Wuxi, Jiangsu 214122, People's Republic of China
- Synergetic Innovation Center of Food Safety and Nutrition, Jiangnan University , Wuxi, Jiangsu 214122, People's Republic of China
| | - Timo Stressler
- University of Hohenheim, Institute of Food Science and Biotechnology , Department of Biotechnology and Enzyme Science, Garbenstrasse 25, Stuttgart 70599, Germany
| | - Lutz Fischer
- University of Hohenheim, Institute of Food Science and Biotechnology , Department of Biotechnology and Enzyme Science, Garbenstrasse 25, Stuttgart 70599, Germany
| | - Wanmeng Mu
- State Key Laboratory of Food Science and Technology, Jiangnan University , Wuxi, Jiangsu 214122, People's Republic of China
- Synergetic Innovation Center of Food Safety and Nutrition, Jiangnan University , Wuxi, Jiangsu 214122, People's Republic of China
- University of Hohenheim, Institute of Food Science and Biotechnology , Department of Biotechnology and Enzyme Science, Garbenstrasse 25, Stuttgart 70599, Germany
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Recent novel applications of levansucrases. Appl Microbiol Biotechnol 2015; 99:6959-69. [DOI: 10.1007/s00253-015-6797-5] [Citation(s) in RCA: 34] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/25/2015] [Revised: 06/22/2015] [Accepted: 06/24/2015] [Indexed: 01/12/2023]
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Wu C, Zhang T, Mu W, Miao M, Jiang B. Biosynthesis of lactosylfructoside by an intracellular levansucrase from Bacillus methylotrophicus SK 21.002. Carbohydr Res 2015; 401:122-6. [DOI: 10.1016/j.carres.2014.11.001] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/23/2014] [Revised: 11/02/2014] [Accepted: 11/05/2014] [Indexed: 10/24/2022]
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Díez-Municio M, Herrero M, Olano A, Moreno FJ. Synthesis of novel bioactive lactose-derived oligosaccharides by microbial glycoside hydrolases. Microb Biotechnol 2014; 7:315-31. [PMID: 24690139 PMCID: PMC4241725 DOI: 10.1111/1751-7915.12124] [Citation(s) in RCA: 43] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/13/2013] [Revised: 02/21/2014] [Accepted: 02/23/2014] [Indexed: 12/17/2022] Open
Abstract
Prebiotic oligosaccharides are increasingly demanded within the Food Science domain because of the interesting healthy properties that these compounds may induce to the organism, thanks to their beneficial intestinal microbiota growth promotion ability. In this regard, the development of new efficient, convenient and affordable methods to obtain this class of compounds might expand even further their use as functional ingredients. This review presents an overview on the most recent interesting approaches to synthesize lactose-derived oligosaccharides with potential prebiotic activity paying special focus on the microbial glycoside hydrolases that can be effectively employed to obtain these prebiotic compounds. The most notable advantages of using lactose-derived carbohydrates such as lactosucrose, galactooligosaccharides from lactulose, lactulosucrose and 2-α-glucosyl-lactose are also described and commented.
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Affiliation(s)
- Marina Díez-Municio
- Instituto de Investigación en Ciencias de la Alimentación, CIAL (CSIC-UAM), CEI (UAM+CSIC)C/ Nicolás Cabrera 9, Madrid, 28049, Spain
| | - Miguel Herrero
- Instituto de Investigación en Ciencias de la Alimentación, CIAL (CSIC-UAM), CEI (UAM+CSIC)C/ Nicolás Cabrera 9, Madrid, 28049, Spain
| | - Agustín Olano
- Instituto de Investigación en Ciencias de la Alimentación, CIAL (CSIC-UAM), CEI (UAM+CSIC)C/ Nicolás Cabrera 9, Madrid, 28049, Spain
| | - F Javier Moreno
- Instituto de Investigación en Ciencias de la Alimentación, CIAL (CSIC-UAM), CEI (UAM+CSIC)C/ Nicolás Cabrera 9, Madrid, 28049, Spain
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Current studies on physiological functions and biological production of lactosucrose. Appl Microbiol Biotechnol 2013; 97:7073-80. [DOI: 10.1007/s00253-013-5079-3] [Citation(s) in RCA: 32] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/13/2013] [Revised: 06/21/2013] [Accepted: 06/21/2013] [Indexed: 01/01/2023]
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Tonozuka T, Tamaki A, Yokoi G, Miyazaki T, Ichikawa M, Nishikawa A, Ohta Y, Hidaka Y, Katayama K, Hatada Y, Ito T, Fujita K. Crystal structure of a lactosucrose-producing enzyme, Arthrobacter sp. K-1 β-fructofuranosidase. Enzyme Microb Technol 2012; 51:359-65. [DOI: 10.1016/j.enzmictec.2012.08.004] [Citation(s) in RCA: 28] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/17/2012] [Revised: 08/08/2012] [Accepted: 08/08/2012] [Indexed: 10/28/2022]
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Daudé D, Remaud-Siméon M, André I. Sucrose analogs: an attractive (bio)source for glycodiversification. Nat Prod Rep 2012; 29:945-60. [DOI: 10.1039/c2np20054f] [Citation(s) in RCA: 30] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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Park NH, Choi HJ, Oh DK. Lactosucrose production by various microorganisms harboring levansucrase activity. Biotechnol Lett 2005; 27:495-7. [PMID: 15928856 DOI: 10.1007/s10529-005-2539-6] [Citation(s) in RCA: 39] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/16/2004] [Revised: 02/09/2005] [Accepted: 02/09/2005] [Indexed: 10/25/2022]
Abstract
Production of the artificial sweetener, lactosucrose, by various microorganisms containing levansucrase activity was investigated. Of the tested bacteria, Bacillus subtilis was the most effective producer using lactose as an acceptor and sucrose as a fructosyl donor. Lactosucrose production by this strain was optimal at pH 6.0 and 55 degrees C whereupon 181 g lactosucrose l(-1) was produced from 225 g lactose l(-1) and 225 g sucrose l(-1) in 10 h.
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Affiliation(s)
- Nyun-Ho Park
- Department of Bioscience and Biotechnology, Sejong University, Seoul, 143-747, Korea
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Imai S, Takeuchi K, Shibata K, Yoshikawa S, Kitahata S, Okada S, Araya S, Nisizawa T. Screening of sugars inhibitory against sucrose-dependent synthesis and adherence of insoluble glucan and acid production by Streptococcus mutans. J Dent Res 1984; 63:1293-7. [PMID: 6594372 DOI: 10.1177/00220345840630110801] [Citation(s) in RCA: 26] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/20/2023] Open
Abstract
Various sucrose derivatives and a sucrose analogue were enzymatically synthesized on the assumption that structural similarities of the sugars to sucrose would endow them with an ability to inhibit the cariogenicity of sucrose. The effect of these sugars on sucrose-dependent synthesis and adherence of insoluble glucan and on acid fermentation of sucrose by Streptococcus mutans was examined in vitro. Although none of them inhibited the acid fermentation, several sugars not only inhibited the synthesis and adherence of insoluble glucan, but were themselves only slightly fermented as well.
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Hehre EJ, Suzuki H. New reactions of dextransucrase: alpha-D-glucosyl transfers to and from the anomeric sites of lactulose and fructose. Arch Biochem Biophys 1966; 113:675-83. [PMID: 5944967 DOI: 10.1016/0003-9861(66)90247-5] [Citation(s) in RCA: 39] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/17/2023]
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SUZUKI H, HEHRE EJ. Lactulosucrose (4F-β-galactosylsucrose), a new trisaccharide synthesized by cultures of Leuconostoc mesenteroides strain K (NRRL B-1299). Arch Biochem Biophys 1964; 105:339-48. [PMID: 14186740 DOI: 10.1016/0003-9861(64)90017-7] [Citation(s) in RCA: 15] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
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BAILEY RW, PRIDHAM JB. Oligosaccharides. ACTA ACUST UNITED AC 1963; 17:121-67. [PMID: 13969021 DOI: 10.1016/s0096-5332(08)60135-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 04/24/2023]
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The Oligosaccharides* *Prepared with support from the National Institute of Arthritis and Metabolic Diseases (USPHS A-3555) and the U.S. Army, Medical Research and Development: Board (ASG MD-773). ACTA ACUST UNITED AC 1963. [DOI: 10.1016/b978-1-4831-9717-3.50013-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register]
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