1
|
Fidler AL, Vanacore RM, Chetyrkin SV, Pedchenko VK, Bhave G, Yin VP, Stothers CL, Rose KL, McDonald WH, Clark TA, Borza DB, Steele RE, Ivy MT, Hudson JK, Hudson BG. A unique covalent bond in basement membrane is a primordial innovation for tissue evolution. Proc Natl Acad Sci U S A 2014; 111:331-6. [PMID: 24344311 PMCID: PMC3890831 DOI: 10.1073/pnas.1318499111] [Citation(s) in RCA: 114] [Impact Index Per Article: 11.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022] Open
Abstract
Basement membrane, a specialized ECM that underlies polarized epithelium of eumetazoans, provides signaling cues that regulate cell behavior and function in tissue genesis and homeostasis. A collagen IV scaffold, a major component, is essential for tissues and dysfunctional in several diseases. Studies of bovine and Drosophila tissues reveal that the scaffold is stabilized by sulfilimine chemical bonds (S = N) that covalently cross-link methionine and hydroxylysine residues at the interface of adjoining triple helical protomers. Peroxidasin, a heme peroxidase embedded in the basement membrane, produces hypohalous acid intermediates that oxidize methionine, forming the sulfilimine cross-link. We explored whether the sulfilimine cross-link is a fundamental requirement in the genesis and evolution of epithelial tissues by determining its occurrence and evolutionary origin in Eumetazoa and its essentiality in zebrafish development; 31 species, spanning 11 major phyla, were investigated for the occurrence of the sulfilimine cross-link by electrophoresis, MS, and multiple sequence alignment of de novo transcriptome and available genomic data for collagen IV and peroxidasin. The results show that the cross-link is conserved throughout Eumetazoa and arose at the divergence of Porifera and Cnidaria over 500 Mya. Also, peroxidasin, the enzyme that forms the bond, is evolutionarily conserved throughout Metazoa. Morpholino knockdown of peroxidasin in zebrafish revealed that the cross-link is essential for organogenesis. Collectively, our findings establish that the triad-a collagen IV scaffold with sulfilimine cross-links, peroxidasin, and hypohalous acids-is a primordial innovation of the ECM essential for organogenesis and tissue evolution.
Collapse
Affiliation(s)
- Aaron L. Fidler
- Department of Medicine, Division of Nephrology and Hypertension
| | - Roberto M. Vanacore
- Department of Medicine, Division of Nephrology and Hypertension
- Center for Matrix Biology
| | - Sergei V. Chetyrkin
- Department of Medicine, Division of Nephrology and Hypertension
- Center for Matrix Biology
| | - Vadim K. Pedchenko
- Department of Medicine, Division of Nephrology and Hypertension
- Center for Matrix Biology
| | - Gautam Bhave
- Department of Medicine, Division of Nephrology and Hypertension
- Center for Matrix Biology
| | - Viravuth P. Yin
- Kathryn W. Davis Center for Regenerative Biology and Medicine, Mount Desert Island Biological Laboratory, Salisbury Cove, ME 04672
| | | | | | - W. Hayes McDonald
- Department of Biochemistry
- Mass Spectrometry Research Center
- Vanderbilt–Ingram Cancer Center
| | | | - Dorin-Bogdan Borza
- Department of Medicine, Division of Nephrology and Hypertension
- Center for Matrix Biology
| | - Robert E. Steele
- Department of Biological Chemistry, University of California, Irvine, CA 92697; and
| | - Michael T. Ivy
- Department of Biological Sciences, Tennessee State University, Nashville, TN 37209
| | | | | | - Billy G. Hudson
- Department of Medicine, Division of Nephrology and Hypertension
- Center for Matrix Biology
- Department of Biochemistry
- Vanderbilt–Ingram Cancer Center
- Department of Pathology, Microbiology, and Immunology, and
- Vanderbilt Institute of Chemical Biology, Vanderbilt University Medical Center, Nashville, TN 37232
- Kathryn W. Davis Center for Regenerative Biology and Medicine, Mount Desert Island Biological Laboratory, Salisbury Cove, ME 04672
| |
Collapse
|
2
|
Grimaldi A, Boselli A, Tettamanti G, Lurati S, Valvassori R, Lanzavecchia G. Possible roles of extracellular matrix and cytoskeleton in leech body wall muscles. J Microsc 1999; 196:6-18. [PMID: 10540251 DOI: 10.1046/j.1365-2818.1999.00600.x] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
Abstract
Round circomyarian fibres of leeches are peculiar helical muscles. The fibres are characterized by a lack of junctions, being separated by a thick extracellular matrix, and by scarce end-plates. Even so, the fibres grouped in units show the same degree of contraction. Biochemical, immunocytochemical and ultrastructural studies were performed in order: (a) to demonstrate the presence in the extracellular matrix of fibronectin, collagen type IV and laminin and in the cytoskeleton of desmin and alpha-actinin; (b) to show the possible link of extracellular matrix with the scaffold of intermediate filaments; (c) to evaluate how the extracellular matrix can play a role in the transduction of a signal during contraction-relaxation-superelongation phases.
Collapse
|
3
|
Pedersen KJ. Invited Review: Structure and Composition of Basement Membranes and Other Basal Matrix Systems in Selected Invertebrates. ACTA ZOOL-STOCKHOLM 1991. [DOI: 10.1111/j.1463-6395.1991.tb01196.x] [Citation(s) in RCA: 65] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
|
4
|
Gaill F, Wiedemann H, Mann K, Kühn K, Timpl R, Engel J. Molecular characterization of cuticle and interstitial collagens from worms collected at deep sea hydrothermal vents. J Mol Biol 1991; 221:209-23. [PMID: 1920405 DOI: 10.1016/0022-2836(91)80215-g] [Citation(s) in RCA: 49] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/29/2022]
Abstract
Two different collagens were isolated and characterized from the body walls of the vestimentiferan tube worm Riftia pachyptila and the annelid Alvinella pompejana, both living around hydrothermal vents at a depth of 2600 m. The acid-soluble cuticle collagens consisted of a long triple helix (2.4 microns for Alvinella, 1.5 microns for Riftia) terminating into a globular domain. Molecular masses of 2600 and 1700 kDa, respectively, were estimated from their dimensions. The two cuticle collagens were also quite different in amino acid composition, in agreement with their different supramolecular organizations within tissues. Interstitial collagens corresponding to cross-striated fibrils underneath the epidermal cells could be solubilized by digestion with pepsin and consisted of a single alpha-chain. They were similar in molecular mass (340 kDa) and length (280 nm) but differed in composition and banding patterns of segment-long-spacing fibrils. This implicates significant sequence differences also in comparison to fibril-forming vertebrate collagens, although all form typical quarter-staggered fibrils. The thermal stability of the worm collagens was, with one exception (interstitial collagen of Riftia), in the range of mammalian and bird collagens (37 to 46 degrees C), and thus distinctly above that of shallow sea water annelids. Yet, their 4-hydroxyproline contents were not directly correlated to this stability. About 20% of Riftia collagen alpha-chain sequence was elucidated by Edman degradation and showed typical Gly-X-Y repeats but only a limited homology (45 to 58% identity) to fibril-forming vertebrate collagens. A single triplet imperfection and the variable hydroxylation of proline in the X position were additional unique features. It suggests that this collagen represents an ancestral form of fibril-forming collagens not directly corresponding to an individual fibril-forming collagen type of vertebrates.
Collapse
Affiliation(s)
- F Gaill
- Centre de Biologie Cellulaire, CNRS, Ivry-sur-Seine, France
| | | | | | | | | | | |
Collapse
|
5
|
Pettitt J, Kingston I. The complete primary structure of a nematode alpha 2(IV) collagen and the partial structural organization of its gene. J Biol Chem 1991. [DOI: 10.1016/s0021-9258(18)98528-5] [Citation(s) in RCA: 20] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022] Open
|
6
|
Abstract
Amino acids are major constituents of biological material. Chemically they are extremely stable and combine a relatively simple molecular structure with a wide range of properties and functions. In general, amino acid metabolism in helminths has been relatively neglected and the information available is often uneven and of uncertain quality. However, the search for new target sites for anthelmintic development has led to a renewed interest in this area. The amino acid composition of helminths is similar to that of other invertebrates and no unique amino acids have been reported. With the possible addition of tyrosine, helminths seem to require the same 10 essential amino acids as mammals and, where studied in detail, the pathways of amino acid synthesis in helminths are similar to those of mammals. Although amino acids are not a significant energy source in parasites, helminths are able to catabolize amino acids by pathways which, again, appear identical to those found in mammals. Helminths have also been shown to carry out a number of oxidative reactions associated with amino acid metabolism, including cysteine dioxygenase, proline hydroxylase and tryptophan hydroxylase. There are, however, differences in detail between the pathways of amino acid metabolism in helminths and mammals, particularly in the metabolism of the sulphur amino acids and arginine and proline. These differences may be exploitable in anthelmintic design and proline analogues and proline biosynthesis inhibitors show some potential as fasciolicides (Sheers et al., 1982). Differences in metabolism between parasites and their hosts may be the result of parasitic adaptation or they may merely reflect general features of the invertebrate phyla as a whole. Thus a comparison of amino acid metabolism in parasitic helminths with that of their free-living relatives may give some insight into the biochemical basis of parasitism.
Collapse
Affiliation(s)
- J Barrett
- Department of Biological Sciences, University College of Wales, Aberystwyth, UK
| |
Collapse
|
7
|
Yoshinaka R, Mizuta S, Itoh Y, Sato M. Two genetically distinct types of collagen in kuruma prawn Penaeus japonicus. ACTA ACUST UNITED AC 1990. [DOI: 10.1016/0305-0491(90)90038-u] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
|
8
|
|
9
|
Noelken ME, Wisdom BJ, Dean DC, Hung CH, Hudson BG. Intestinal basement membrane of Ascaris suum. Molecular organization and properties of the collagen molecules. J Biol Chem 1986. [DOI: 10.1016/s0021-9258(17)38559-9] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/22/2022] Open
|
10
|
Winkfein RJ, Pasternak J, Mudry T, Martin LH. Ascaris lumbricoides: characterization of the collagenous components of the adult cuticle. Exp Parasitol 1985; 59:197-203. [PMID: 2982639 DOI: 10.1016/0014-4894(85)90073-6] [Citation(s) in RCA: 18] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/03/2023]
Abstract
The proteins of the cuticle of adult Ascaris lumbricoides suum were characterized with respect to heterogeneity, glycosylation, and susceptibility to collagenase. Pepsin digestion of intact cuticles was used to determine the extent of stable triple-helical structures of the cuticular components. With sodium dodecyl sulfate-poly-acrylamide gel electrophoresis, it was shown that treatment of purified cuticles with beta-mercaptoethanol released three components (99, 90, and 68 kDa) which comprise 95% of the total solubilized material. The remaining fraction consists of at least four components (16, 28, 154, and 173 kDa). Periodic acid-Schiff staining showed that the only glycoprotein was the 173-kDa component. All cuticular components, except the 173-kDa protein, were degraded by bacterial collagenase. Pepsin digestion of intact cuticles for 24 hr at 4 C produced, after reduction, a 95-kDa fragment; by 96 hr, four fragments (95, 90, 83, and 77 kDa) were evident. When the 96-hr pepsin digest was treated with fresh pepsin, the 77-kDa fragment became the major constituent. With agarose gel electrophoresis, analysis of non-reduced, pepsin-released material revealed intact aggregates that were greater than 2 X 10(3) kDa. The enzyme digestion studies indicate that, with the exception of the 173-kDa component, each cuticular protein contains collagenous domains and that, within the cuticle, the longest contiguous collagen chain in a triple-helical conformation has a uniform molecular size of 77 kDa.
Collapse
|
11
|
Davidson LA. A freeze fracture and thin section study of intestinal cell membranes and intercellular junctions of a nematode, Ascaris. Tissue Cell 1983; 15:27-37. [PMID: 6857633 DOI: 10.1016/0040-8166(83)90031-9] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/22/2023]
Abstract
The microvillar and lumenal plasma membrane P-face of Ascaris intestinal cells is shown to be covered by relatively large (13 nm) particles at a fairly high density (1000/microm2), while the E-face has virtually none. The P-face of the lateral cell membranes, those separating the cells, have fewer and smaller (8 nm) particles. The intestinal cells are also shown to be connected by an apical complex of smooth septate and tricellular junctions similar to those found between some insect midgut cells. A periodic layer of tannic acid staining material is found on the cytoplasmic sides of the smooth septate junction, and when the intercellular space is filled with lanthanum, smoothly curved, 10 nm wide septal walls can be seen. Below the belt of septate junctions are a large number of gap junctions. These have closely packed arrays of particles on the P-face with some particle aggregates adhering to the closely packed pit arrays on the E-face.
Collapse
|
12
|
Takema Y, Kimura S. Two genetically distinct molecular species of octopus muscle collagen. BIOCHIMICA ET BIOPHYSICA ACTA 1982; 706:123-8. [PMID: 6812636 DOI: 10.1016/0167-4838(82)90382-x] [Citation(s) in RCA: 22] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/22/2023]
Abstract
The arm muscular tissue of an octopus, Octopus vulgaris, was subjected to limited proteolysis with pepsin and the solubilized tissue collagen was separated into two fractions by selective salt precipitation. Biochemical characterization of the major collagen fraction precipitating at 0.45 M NaCl (pH 2.6) has demonstrated that it comprises almost a single type of molecular species with structure (alpha 1)2 alpha 2, which was identified by its CNBr-peptide pattern as being similar to Type I-like collagen of octopus skin. On the other hand, the minor collagen fraction precipitating at 0.90 M NaCl (pH 2.6) was found to contain a unique gamma-chain-sized component cross-linked by disulfide bonds. Sepharose CL-4B gel filtration of the reduced gamma component revealed the presence of an alpha component, which is virtually identical in amino acid composition to the original gamma protein and bears a close resemblance to known basement membrane collagens. This unique alpha component was genetically distinct from alpha 1 and alpha 2 chains of the major muscle collagen as judged by their CNBr-peptide patterns.
Collapse
|
13
|
|
14
|
Ouazana R, Herbage D. Biochemical characterization of the cuticle collagen of the nematode Caenorhabditis elegans. BIOCHIMICA ET BIOPHYSICA ACTA 1981; 669:236-43. [PMID: 7284437 DOI: 10.1016/0005-2795(81)90246-4] [Citation(s) in RCA: 21] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/24/2023]
Abstract
Proteins of purified cuticles from adults of the small free-living nematode Caenorhabditis elegans are solubilized by reduction in the presence of a strong denaturing agent and then carboxymethylated. As in the large parasitic nematode Ascaris lumbricoïdes, these soluble proteins appeared to be collagens by their amino acid compositions. C. elegans cuticle collagen is separated into seven major components with different apparent molecular weights by molecular sieve chromatography and sodium dodecyl sulphate-polyacrylamide gel electrophoresis. The two main components, which together account for more than 64% of the total cuticle collagen, were extracted from gel after electrophoresis and analyzed. They differ in their amino acid compositions and would seem to represent genetically distinct collagen chains. The results presented lead to the hypothesis of the presence in this collagen of at least two different chains.
Collapse
|
15
|
Butkowski R, Brungardt G, Grantham J, Hudson B. Characterization of the collagenous domain of tubular basement membrane. J Biol Chem 1981. [DOI: 10.1016/s0021-9258(19)69004-6] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/22/2022] Open
|
16
|
Hung C, Noelken M, Hudson B. Intestinal basement membrane of Ascaris suum. Physical properties of the collagenous domain. J Biol Chem 1981. [DOI: 10.1016/s0021-9258(19)69529-3] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022] Open
|
17
|
Heathcote JG, Grant ME. The molecular organization of basement membranes. INTERNATIONAL REVIEW OF CONNECTIVE TISSUE RESEARCH 1981; 9:191-264. [PMID: 7040276 DOI: 10.1016/b978-0-12-363709-3.50011-5] [Citation(s) in RCA: 76] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/23/2023]
|
18
|
West T, Fox J, Jodlowski M, Freytag J, Hudson B. Bovine glomerular basement membrane. Properties of the collagenous domain. J Biol Chem 1980. [DOI: 10.1016/s0021-9258(19)70485-2] [Citation(s) in RCA: 15] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/22/2022] Open
|