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Tokuhashi K, Takizawa K, Kondo S. Reaction Rates of OH Radicals with CH 3OCF 2CHFCF 3 and CHF 2CF 2OCH 2CF 2CHF 2: Measurements and Estimation Using Neural Network Method. J Phys Chem A 2024; 128:1134-1141. [PMID: 38305227 DOI: 10.1021/acs.jpca.3c07376] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/03/2024]
Abstract
The reaction rates of OH radicals with CH3OCF2CHFCF3 (k1) and CHF2CF2OCH2CF2CHF2 (k2) were measured over a temperature range of 250-430 K. Kinetic measurements were performed using the flash and laser photolysis methods combined with a laser-induced fluorescence technique. The Arrhenius rate parameters were determined as k1 = (2.52 ± 0.25) × 10-12·exp[-(1390 ± 30)/T], k2 = (1.83 ± 0.20) × 10-12·exp[-(1420 ± 35)/T] cm3 molecule-1 s-1. The infrared absorption spectra of the two hydrofluoroethers were measured at approximately 298 K in 760 Torr of N2. The atmospheric lifetimes of CH3OCF2CHFCF3 and CHF2CF2OCH2CF2CHF2 have been estimated as 2.5 and 3.8 years, respectively, and their global warming potentials were determined as 245 and 405, respectively. Additionally, a method, using a three-layered feed-forward neural network, for estimating the rates of the reaction of the OH radicals with alkanes, ethers, and alcohols was investigated. The ratios of the calculated reaction rates to the observed ones agreed within a factor of 2. The ability of the neural network method to predict reaction rates was examined by using a leave-one-out test.
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Affiliation(s)
- Kazuaki Tokuhashi
- National Institute of Advanced Industrial Science and Technology (AIST), 1-1-1 Higashi, Tsukuba, Ibaraki 305-8565, Japan
| | - Kenji Takizawa
- National Institute of Advanced Industrial Science and Technology (AIST), 1-1-1 Higashi, Tsukuba, Ibaraki 305-8565, Japan
| | - Shigeo Kondo
- National Institute of Advanced Industrial Science and Technology (AIST), 1-1-1 Higashi, Tsukuba, Ibaraki 305-8565, Japan
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Allison TC. Application of an Artificial Neural Network to the Prediction of OH Radical Reaction Rate Constants for Evaluating Global Warming Potential. J Phys Chem B 2015; 120:1854-63. [PMID: 26684219 DOI: 10.1021/acs.jpcb.5b09558] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
Rate constants for reactions of chemical compounds with hydroxyl radical are a key quantity used in evaluating the global warming potential of a substance. Experimental determination of these rate constants is essential, but it can also be difficult and time-consuming to produce. High-level quantum chemistry predictions of the rate constant can suffer from the same issues. Therefore, it is valuable to devise estimation schemes that can give reasonable results on a variety of chemical compounds. In this article, the construction and training of an artificial neural network (ANN) for the prediction of rate constants at 298 K for reactions of hydroxyl radical with a diverse set of molecules is described. Input to the ANN consists of counts of the chemical bonds and bends present in the target molecule. The ANN is trained using 792 (•)OH reaction rate constants taken from the NIST Chemical Kinetics Database. The mean unsigned percent error (MUPE) for the training set is 12%, and the MUPE of the testing set is 51%. It is shown that the present methodology yields rate constants of reasonable accuracy for a diverse set of inputs. The results are compared to high-quality literature values and to another estimation scheme. This ANN methodology is expected to be of use in a wide range of applications for which (•)OH reaction rate constants are required. The model uses only information that can be gathered from a 2D representation of the molecule, making the present approach particularly appealing, especially for screening applications.
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Affiliation(s)
- Thomas C Allison
- Chemical Informatics Research Group, Material Measurement Laboratory, National Institute of Standards and Technology , 100 Bureau Drive, Stop 8320, Gaithersburg, Maryland 20899-8320, United States
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Mishra BK, Lily M, Chandra AK, Deka RC. Theoretical studies on atmospheric chemistry of HFE-347mcc3: reactions with OH radicals and Cl atoms. J PHYS ORG CHEM 2014. [DOI: 10.1002/poc.3340] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
Affiliation(s)
| | - Makroni Lily
- Department of Chemistry; North - Eastern Hill University; Shillong 793 022 India
| | - Asit K. Chandra
- Department of Chemistry; North - Eastern Hill University; Shillong 793 022 India
| | - Ramesh Chandra Deka
- Department of Chemical Sciences; Tezpur University Tezpur; Assam 784 028 India
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Kinetics, mechanism and thermochemistry of the gas phase reactions of CF3CH2OCH2CF3 with OH radicals: A theoretical study. J Fluor Chem 2014. [DOI: 10.1016/j.jfluchem.2014.02.009] [Citation(s) in RCA: 26] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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Lily M, Sutradhar D, Chandra AK. Theoretical investigations on kinetics, mechanism and thermochemistry of the gas phase reactions of CHF2OCF2CHF2 with OH radicals. COMPUT THEOR CHEM 2013. [DOI: 10.1016/j.comptc.2013.08.016] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/26/2022]
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Poutsma ML. Evolution of Structure–Reactivity Correlations for the Hydrogen Abstraction Reaction by Hydroxyl Radical and Comparison with That by Chlorine Atom. J Phys Chem A 2013; 117:6433-49. [DOI: 10.1021/jp404749z] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Marvin L. Poutsma
- Chemical Sciences Division, Oak Ridge National Laboratory, P.O. Box 2008, Oak Ridge, Tennessee
37831-6197, United States
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Balabin RM, Lomakina EI. Support vector machine regression (LS-SVM)—an alternative to artificial neural networks (ANNs) for the analysis of quantum chemistry data? Phys Chem Chem Phys 2011; 13:11710-8. [DOI: 10.1039/c1cp00051a] [Citation(s) in RCA: 139] [Impact Index Per Article: 10.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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Behler J. Neural network potential-energy surfaces in chemistry: a tool for large-scale simulations. Phys Chem Chem Phys 2011; 13:17930-55. [DOI: 10.1039/c1cp21668f] [Citation(s) in RCA: 477] [Impact Index Per Article: 36.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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Balabin RM, Lomakina EI. Neural network approach to quantum-chemistry data: Accurate prediction of density functional theory energies. J Chem Phys 2009; 131:074104. [DOI: 10.1063/1.3206326] [Citation(s) in RCA: 115] [Impact Index Per Article: 7.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/22/2022] Open
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Li Y, Zhang B, Li H. The estimation of ether’s enthalpies of formation. RUSSIAN JOURNAL OF PHYSICAL CHEMISTRY A 2009. [DOI: 10.1134/s0036024409030066] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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Vleeschouwer FD, Speybroeck VV, Waroquier M, Geerlings P, Proft FD. An Intrinsic Radical Stability Scale from the Perspective of Bond Dissociation Enthalpies: A Companion to Radical Electrophilicities. J Org Chem 2008; 73:9109-20. [DOI: 10.1021/jo802018b] [Citation(s) in RCA: 46] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Freija De Vleeschouwer
- Eenheid Algemene Chemie (ALGC), Faculteit Wetenschappen, Vrije Universiteit Brussel (VUB), Pleinlaan 2, 1050 Brussels, Belgium, and Center for Molecular Modeling (CMM), Ghent University (UG), Proeftuinstraat 86, 9000 Gent, Belgium
| | - Veronique Van Speybroeck
- Eenheid Algemene Chemie (ALGC), Faculteit Wetenschappen, Vrije Universiteit Brussel (VUB), Pleinlaan 2, 1050 Brussels, Belgium, and Center for Molecular Modeling (CMM), Ghent University (UG), Proeftuinstraat 86, 9000 Gent, Belgium
| | - Michel Waroquier
- Eenheid Algemene Chemie (ALGC), Faculteit Wetenschappen, Vrije Universiteit Brussel (VUB), Pleinlaan 2, 1050 Brussels, Belgium, and Center for Molecular Modeling (CMM), Ghent University (UG), Proeftuinstraat 86, 9000 Gent, Belgium
| | - Paul Geerlings
- Eenheid Algemene Chemie (ALGC), Faculteit Wetenschappen, Vrije Universiteit Brussel (VUB), Pleinlaan 2, 1050 Brussels, Belgium, and Center for Molecular Modeling (CMM), Ghent University (UG), Proeftuinstraat 86, 9000 Gent, Belgium
| | - Frank De Proft
- Eenheid Algemene Chemie (ALGC), Faculteit Wetenschappen, Vrije Universiteit Brussel (VUB), Pleinlaan 2, 1050 Brussels, Belgium, and Center for Molecular Modeling (CMM), Ghent University (UG), Proeftuinstraat 86, 9000 Gent, Belgium
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Prediction Partial Molar Heat Capacity at Infinite Dilution for Aqueous Solutions of Various Polar Aromatic Compounds over a Wide Range of Conditions Using Artificial Neural Networks. B KOREAN CHEM SOC 2007. [DOI: 10.5012/bkcs.2007.28.9.1477] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
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Prediction Acidity Constant of Various Benzoic Acids and Phenols in Water Using Linear and Nonlinear QSPR Models. B KOREAN CHEM SOC 2005. [DOI: 10.5012/bkcs.2005.26.12.2007] [Citation(s) in RCA: 33] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
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Habibi-Yangjeh A, Danandeh-Jenagharad M, Nooshyar M. Application of artificial neural networks for predicting the aqueous acidity of various phenols using QSAR. J Mol Model 2005; 12:338-47. [PMID: 16344950 DOI: 10.1007/s00894-005-0050-6] [Citation(s) in RCA: 30] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/25/2005] [Accepted: 07/22/2005] [Indexed: 10/25/2022]
Abstract
Artificial neural networks (ANNs) have been successfully trained to model and predict the acidity constants (pK(a)) of 128 various phenols with diverse chemical structures using a quantitative structure-activity relationship. An ANN with 6-14-1 architecture was generated using six molecular descriptors that appear in the multi-parameter linear regression (MLR) model. The polarizability term (pi (I)), most positive charge of acidic hydrogen atom (q+), molecular weight (MW), most negative charge of the phenolic oxygen atom (q-), the hydrogen-bond accepting ability (epsilon(B)) and partial-charge weighted topological electronic (PCWTE) descriptors are inputs and its output is pK(a). It was found that a properly selected and trained neural network with 106 phenols could represent the dependence of the acidity constant on molecular descriptors fairly well. For evaluation of the predictive power of the ANN, an optimized network was used to predict the pK(a)s of 22 compounds in the prediction set, which were not used in the optimization procedure. A squared correlation coefficient (R2) and root mean square error (RMSE) of 0.8950 and 0.5621 for the prediction set by the MLR model should be compared with the values of 0.99996 and 0.0114 by the ANN model. These improvements are due to the fact that the pK(a) of phenols shows non-linear correlations with the molecular descriptors. [Figure: see text].
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Affiliation(s)
- Aziz Habibi-Yangjeh
- Department of Chemistry, Faculty of Science, University of Mohaghegh Ardebili, P. O. Box 179, Ardebil, Iran.
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Prediction of Solvent Effects on Rate Constant of [2+2] Cycloaddition Reaction of Diethyl Azodicarboxylate with Ethyl Vinyl Ether Using Artificial Neural Networks. B KOREAN CHEM SOC 2005. [DOI: 10.5012/bkcs.2005.26.1.139] [Citation(s) in RCA: 14] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
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Oyaro N, Sellevåg SR, Nielsen CJ. Atmospheric Chemistry of Hydrofluoroethers: Reaction of a Series of Hydrofluoroethers with OH Radicals and Cl Atoms, Atmospheric Lifetimes, and Global Warming Potentials. J Phys Chem A 2004; 109:337-46. [PMID: 16833352 DOI: 10.1021/jp047860c] [Citation(s) in RCA: 67] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
The kinetics of the OH radical and Cl atom reactions with nine fluorinated ethers have been studied by the relative rate method at 298 K and 1013 hPa using gas chromatography-mass spectroscopy (GC-MS) detection: k(OH + CH3CH2OCF3) = (1.55 +/- 0.25) x 10(-13), k(OH + CF3CH2OCH3) = (5.7 +/- 0.8) x 10(-13),k(OH + CF3CH2OCHF2) = (9.1 +/- 1.1) x 10(-15), k(OH + CF3CHFOCHF2) = (6.5 +/- 0.8) x 10(-15), k(OH + CHF2CHFOCF3) = (6.8 +/- 1.1) x 10(-15), k(OH + CF3CHFOCF3) < 1 x 10(-15), k(OH + CF3CHFCF2OCHF2) = (1.69 +/- 0.26) x 10(-14), k(OH + CF3CHFCF2OCH2CH3) = (1.47 +/- 0.13) x 10(-13), k(OH + CF3CF2CF2OCHFCF3) < 1 x 10(-15), k(Cl + CH3CH2OCF3) = (2.2 +/- 0.8) x 10(-12), k(Cl + CF3CH2OCH3) = (1.8 +/- 0.9) x 10(-11), k(Cl + CF3CH2OCHF2) = (1.5 +/- 0.4) x 10(-14), k(Cl + CF3CHFOCHF2) = (1.1 +/- 1.9) x 10(-15), k(Cl + CHF2CHFOCF3) = (1.2 +/- 2.0) x 10(-15), k(Cl + CF3CHFOCF3) < 3 x 10(-15), k(Cl + CF3CHFCF2OCHF2) < 6 x 10(-16), k(Cl + CF3CHFCF2OCH2CH3) = (3.1 +/- 1.1) x 10(-12), and k(Cl + CF3CF2CF2OCHFCF3) < 3 x 10(-15) cm3 molecule(-1) s(-1). The error limits include three standard deviations (3 sigma) from the statistical data analyses, as well as the errors in the rate coefficients of the reference compounds that are used. Infrared absorption cross sections and estimates of the trophospheric lifetimes and the global warming potentials of the fluorinated ethers are presented. The atmospheric degradation of the compounds is discussed.
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Affiliation(s)
- Nathan Oyaro
- Department of Chemistry, University of Oslo, P.O. Box 1033 Blindern, N-0315 Oslo, Norway
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Oyaro N, Sellevåg SR, Nielsen CJ. Study of the OH and Cl-initiated oxidation, IR absorption cross-section, radiative forcing, and global warming potential of four C4-hydrofluoroethers. ENVIRONMENTAL SCIENCE & TECHNOLOGY 2004; 38:5567-5576. [PMID: 15575273 DOI: 10.1021/es0497330] [Citation(s) in RCA: 49] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/24/2023]
Abstract
Infrared absorption cross-sections and OH and Cl reaction rate coefficients for four C4-hydrofluoroethers (CF3)2CHOCH3, CF3CH2OCH2CF3, CF3CF2CH2OCH3, and CHF2CF2CH2OCH3 are reported. Relative rate measurements at 298 K and 1013 hPa of OH and Cl reaction rate coefficients give k(OH+(CF3)2CHOCH3) = (1.27+/-0.13) x 10(-13), k(OH+CF3CH2OCH2CF3) = (1.51+/-0.24) x 10(-13), k(OH+CF3CF2CH2OCH3) = (6.42+/-0.33) x 10(-13), k(OH+CHF2CF2CH2OCH3) = (8.7 +/-0.5) x 10(-13), k(Cl+(CF3)2CHOCH3) = (8.4+/-1.3) x 10(-12), k(Cl+CF3CH2OCH2CF3) = (6.5+/-1.7) x 10(-13), k(Cl+CF3CF2CH2OCH3) = (4.0+/-0.8) x 10(-11), and k(Cl+CHF2CF2CH2OCH3) = (2.65+/-0.17) x 10(-11) cm3 molecule(-1) s(-1). The primary products of the OH and Cl reactions with the fluorinated ethers have been identified as esters, and OH and Cl reaction rate coefficients for one of these, CF3CH2OCHO, are reported: k(OH+CF3CH2OCHO) = (7.7+/-0.9) x 10(-14) and kCl+CF3CH2OCHO) = (6.3+/-1.9) x 10(-14) cm3 molecule(-1) s(-1) The rate coefficient for the Cl-atom reaction with CHF2CH2F is derived as k(Cl+CHF2CH2F) = (3.0+/-0.9) x 10(-14) cm3 molecule(-1) s(-1) at 298 K. The error limits include 3sigma from the statistical data analyses as well as the errors in the rate coefficients of the reference compounds employed. The tropospheric lifetimes of the hydrofluoroethers are estimated to be short tauOH((CF3)2CHOCH3) approximately 100 days, tauOH(CF3CH2OCH2CF3) approximately 80 days, tauOH(CF3CF2CH2OCH3) approximately 20 days, and tauOH(CHF2CF2CH2OCH3) approximately 14 days, and their global warming potentials are small compared to CFC-11.
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Affiliation(s)
- Nathan Oyaro
- Department of Chemistry, University of Oslo, Blindern, N-0315 Oslo, Norway
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Feng Y, Liu L, Wang JT, Huang H, Guo QX. Assessment of Experimental Bond Dissociation Energies Using Composite ab Initio Methods and Evaluation of the Performances of Density Functional Methods in the Calculation of Bond Dissociation Energies. ACTA ACUST UNITED AC 2003; 43:2005-13. [PMID: 14632451 DOI: 10.1021/ci034033k] [Citation(s) in RCA: 124] [Impact Index Per Article: 5.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
Composite ab initio CBS-Q and G3 methods were used to calculate the bond dissociation energies (BDEs) of over 200 compounds listed in CRC Handbook of Chemistry and Physics (2002 ed.). It was found that these two methods agree with each other excellently in the calculation of BDEs, and they can predict BDEs within 10 kJ/mol of the experimental values. Using these two methods, it was found that among the examined compounds 161 experimental BDEs are valid because the standard deviation between the experimental and theoretical values for them is only 8.6 kJ/mol. Nevertheless, 40 BDEs listed in the Handbook may be highly inaccurate as the experimental and theoretical values for them differ by over 20 kJ/mol. Furthermore, 11 BDEs listed in the Handbook may be seriously flawed as the experimental and theoretical values for them differ by over 40 kJ/mol. Using the 161 cautiously validated experimental BDEs, we then assessed the performances of the standard density functional (DFT) methods including B3LYP, B3P86, B3PW91, and BH&HLYP in the calculation of BDEs. It was found that the BH&HLYP method performed poorly for the BDE calculations. B3LYP, B3P86, and B3PW91, however, performed reasonably well for the calculation of BDEs with standard deviations of about 12.1-18.0 kJ/mol. Nonetheless, all the DFT methods underestimated the BDEs by 4-17 kJ/mol in average. Sometimes, the underestimation by the DFT methods could be as high as 40-60 kJ/mol. Therefore, the DFT methods were more reliable for relative BDE calculations than for absolute BDE calculations. Finally, it was observed that the basis set effects on the BDEs calculated by the DFT methods were usually small except for the heteroatom-hydrogen BDEs.
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Affiliation(s)
- Yong Feng
- Department of Chemistry, University of Science and Technology of China, Hefei 230026, China
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Rate constants estimation for the reaction of hydrofluorocarbons and hydrofluoroethers with OH radicals. Chem Phys Lett 2003. [DOI: 10.1016/s0009-2614(02)01718-9] [Citation(s) in RCA: 66] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
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Chandra AK, Uchimaru T, Urata S, Sugie M, Sekiya A. Estimation of rate constants for hydrogen atom abstraction by OH radicals using the C?H bond dissociation enthalpies: Haloalkanes and haloethers. INT J CHEM KINET 2002. [DOI: 10.1002/kin.10110] [Citation(s) in RCA: 16] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
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