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For: Umeda M, Ohtsubo E. Mapping of insertion element IS5 in the Escherichia coli K-12 chromosome. Chromosomal rearrangements mediated by IS5. J Mol Biol 1990;213:229-37. [PMID: 2160543 DOI: 10.1016/s0022-2836(05)80186-x] [Citation(s) in RCA: 29] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/30/2022]
Number Cited by Other Article(s)
1
Onstead J, Zhang Z, Huo J, Ord JW, Smith S, Saier MH. Investigating How Genomic Contexts Impact IS5 Transposition Within the Escherichia coli Genome. Microorganisms 2024;12:2600. [PMID: 39770802 PMCID: PMC11677980 DOI: 10.3390/microorganisms12122600] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/15/2024] [Revised: 12/06/2024] [Accepted: 12/12/2024] [Indexed: 01/11/2025]  Open
2
Korenskaia AE, Shishkina OD, Klimenko AI, Andreenkova OV, Bobrovskikh MA, Shatskaya NV, Vasiliev GV, Gruntenko NE. New Wolbachia pipientis Genotype Increasing Heat Stress Resistance of Drosophila melanogaster Host Is Characterized by a Large Chromosomal Inversion. Int J Mol Sci 2022;23:16212. [PMID: 36555851 PMCID: PMC9786649 DOI: 10.3390/ijms232416212] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/11/2022] [Revised: 12/12/2022] [Accepted: 12/15/2022] [Indexed: 12/24/2022]  Open
3
Antibiotic treatment enhances the genome-wide mutation rate of target cells. Proc Natl Acad Sci U S A 2016;113:E2498-505. [PMID: 27091991 DOI: 10.1073/pnas.1601208113] [Citation(s) in RCA: 135] [Impact Index Per Article: 15.0] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/30/2022]  Open
4
IS5 inserts upstream of the master motility operon flhDC in a quasi-Lamarckian way. ISME JOURNAL 2011;5:1517-25. [PMID: 21390082 DOI: 10.1038/ismej.2011.27] [Citation(s) in RCA: 39] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
5
Precise excision of IS5 from the intergenic region between the fucPIK and the fucAO operons and mutational control of fucPIK operon expression in Escherichia coli. J Bacteriol 2010;192:2013-9. [PMID: 20097855 DOI: 10.1128/jb.01085-09] [Citation(s) in RCA: 14] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]  Open
6
Le Gac M, Doebeli M. Environmental viscosity does not affect the evolution of cooperation during experimental evolution of colicigenic bacteria. Evolution 2009;64:522-33. [PMID: 19674096 DOI: 10.1111/j.1558-5646.2009.00814.x] [Citation(s) in RCA: 25] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
7
Yu WL, Chen SC, Hung SW, Chuang YC, Chung JG, Chen IC, Wu LT. Genetic association of blaSHV-5 with transposable elements IS26 and IS5 in Klebsiella pneumoniae from Taiwan. Clin Microbiol Infect 2006;12:806-9. [PMID: 16842580 DOI: 10.1111/j.1469-0691.2006.01488.x] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
8
Sawers RG. Expression of fnr is constrained by an upstream IS5 insertion in certain Escherichia coli K-12 strains. J Bacteriol 2005;187:2609-17. [PMID: 15805507 PMCID: PMC1070394 DOI: 10.1128/jb.187.8.2609-2617.2005] [Citation(s) in RCA: 17] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]  Open
9
Sawers RG. Transcript analysis ofEscherichia coliK-12 insertion element IS5. FEMS Microbiol Lett 2005;244:397-401. [PMID: 15766797 DOI: 10.1016/j.femsle.2005.02.019] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/07/2005] [Revised: 02/14/2005] [Accepted: 02/15/2005] [Indexed: 10/25/2022]  Open
10
Hesslinger C, Sawers G. The tdcE gene in Escherichia coli strain W3110 is separated from the rest of the tdc operon by insertion of IS5 elements. DNA SEQUENCE : THE JOURNAL OF DNA SEQUENCING AND MAPPING 1999;9:183-8. [PMID: 10520749 DOI: 10.3109/10425179809072194] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/13/2022]
11
Stibitz S, Yang MS. Genomic plasticity in natural populations of Bordetella pertussis. J Bacteriol 1999;181:5512-5. [PMID: 10464229 PMCID: PMC94064 DOI: 10.1128/jb.181.17.5512-5515.1999] [Citation(s) in RCA: 23] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]  Open
12
Rudd KE. Linkage map of Escherichia coli K-12, edition 10: the physical map. Microbiol Mol Biol Rev 1998;62:985-1019. [PMID: 9729612 PMCID: PMC98937 DOI: 10.1128/mmbr.62.3.985-1019.1998] [Citation(s) in RCA: 86] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]  Open
13
Kotani H, Tabata S. LESSONS FROM SEQUENCING OF THE GENOME OF A UNICELLULAR CYANOBACTERIUM, SYNECHOCYSTIS SP. PCC6803. ACTA ACUST UNITED AC 1998;49:151-171. [PMID: 15012231 DOI: 10.1146/annurev.arplant.49.1.151] [Citation(s) in RCA: 34] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
14
Romero D, Palacios R. Gene amplification and genomic plasticity in prokaryotes. Annu Rev Genet 1998;31:91-111. [PMID: 9442891 DOI: 10.1146/annurev.genet.31.1.91] [Citation(s) in RCA: 182] [Impact Index Per Article: 6.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/05/2023]
15
Brooke JS, Valvano MA. Biosynthesis of inner core lipopolysaccharide in enteric bacteria identification and characterization of a conserved phosphoheptose isomerase. J Biol Chem 1996;271:3608-14. [PMID: 8631969 DOI: 10.1074/jbc.271.7.3608] [Citation(s) in RCA: 63] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/01/2023]  Open
16
Ohtsubo F, Sekine Y. Bacterial insertion sequences. Curr Top Microbiol Immunol 1996;204:1-26. [PMID: 8556862 DOI: 10.1007/978-3-642-79795-8_1] [Citation(s) in RCA: 27] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/31/2023]
17
Hill CW, Feulner G, Brody MS, Zhao S, Sadosky AB, Sandt CH. Correlation of Rhs elements with Escherichia coli population structure. Genetics 1995;141:15-24. [PMID: 8536964 PMCID: PMC1206714 DOI: 10.1093/genetics/141.1.15] [Citation(s) in RCA: 25] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/31/2023]  Open
18
Kamath AV, Gish K, Yanofsky C. A copy of insertion element IS5 is present within tnaB in the Kohara library of Escherichia coli W3110. J Bacteriol 1994;176:1546-7. [PMID: 8113202 PMCID: PMC205229 DOI: 10.1128/jb.176.5.1546-1547.1994] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/28/2023]  Open
19
Schnaitman CA, Klena JD. Genetics of lipopolysaccharide biosynthesis in enteric bacteria. Microbiol Rev 1993;57:655-82. [PMID: 7504166 PMCID: PMC372930 DOI: 10.1128/mr.57.3.655-682.1993] [Citation(s) in RCA: 311] [Impact Index Per Article: 9.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/25/2023]
20
Kasai H, Isono S, Kitakawa M, Mineno J, Akiyama H, Kurnit DM, Berg DE, Isono K. Efficient large-scale sequencing of the Escherichia coli genome: implementation of a transposon- and PCR-based strategy for the analysis of ordered lambda phage clones. Nucleic Acids Res 1992;20:6509-15. [PMID: 1336178 PMCID: PMC334565 DOI: 10.1093/nar/20.24.6509] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/26/2022]  Open
21
Knight AI, Ni H, Cartwright KA, McFadden JJ. Identification and characterization of a novel insertion sequence, IS1106, downstream of the porA gene in B15 Neisseria meningitidis. Mol Microbiol 1992;6:1565-73. [PMID: 1320728 DOI: 10.1111/j.1365-2958.1992.tb00878.x] [Citation(s) in RCA: 28] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/26/2022]
22
Hendrickson W, Rudd KE. Physical map location of the argFGH operon of Escherichia coli. J Bacteriol 1992;174:3836-7. [PMID: 1592837 PMCID: PMC206082 DOI: 10.1128/jb.174.11.3836-3837.1992] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/27/2022]  Open
23
Schnetz K, Rak B. IS5: a mobile enhancer of transcription in Escherichia coli. Proc Natl Acad Sci U S A 1992;89:1244-8. [PMID: 1311089 PMCID: PMC48425 DOI: 10.1073/pnas.89.4.1244] [Citation(s) in RCA: 95] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/26/2022]  Open
24
Komine Y, Inokuchi H. Precise mapping of the rnpB gene encoding the RNA component of RNase P in Escherichia coli K-12. J Bacteriol 1991;173:1813-6. [PMID: 1705543 PMCID: PMC207335 DOI: 10.1128/jb.173.5.1813-1816.1991] [Citation(s) in RCA: 16] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/28/2022]  Open
25
Rudd KE, Miller W, Werner C, Ostell J, Tolstoshev C, Satterfield SG. Mapping sequenced E.coli genes by computer: software, strategies and examples. Nucleic Acids Res 1991;19:637-47. [PMID: 2011534 PMCID: PMC333660 DOI: 10.1093/nar/19.3.637] [Citation(s) in RCA: 66] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/29/2022]  Open
26
Umeda M, Ohtsubo E. Four types of IS1 with differences in nucleotide sequence reside in the Escherichia coli K-12 chromosome. Gene 1991;98:1-5. [PMID: 1849492 DOI: 10.1016/0378-1119(91)90096-t] [Citation(s) in RCA: 32] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/29/2022]
27
Krawiec S, Riley M. Organization of the bacterial chromosome. Microbiol Rev 1990;54:502-39. [PMID: 2087223 PMCID: PMC372791 DOI: 10.1128/mr.54.4.502-539.1990] [Citation(s) in RCA: 174] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/30/2022]
28
Sharples GJ, Lloyd RG. A novel repeated DNA sequence located in the intergenic regions of bacterial chromosomes. Nucleic Acids Res 1990;18:6503-8. [PMID: 2251112 PMCID: PMC332602 DOI: 10.1093/nar/18.22.6503] [Citation(s) in RCA: 111] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/31/2022]  Open
29
Umeda M, Ohtsubo E. Mapping of insertion element IS30 in the Escherichia coli K12 chromosome. MOLECULAR & GENERAL GENETICS : MGG 1990;222:317-22. [PMID: 1980336 DOI: 10.1007/bf00633835] [Citation(s) in RCA: 15] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/29/2022]
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