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Tupikina EY, Korostelev VO, Krutin DV, Tolstoy PM. Evolution of vibrational bands upon gradual protonation/deprotonation of arsinic acid H 2As(O)OH in media of different polarity. Phys Chem Chem Phys 2023; 25:8664-8675. [PMID: 36891959 DOI: 10.1039/d2cp06060d] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/22/2023]
Abstract
This computational work is devoted to the investigation (MP2/def2-TZVP) of the geometry and IR parameters of arsinic acid H2AsOOH and its hydrogen-bonded complexes under vacuum and in media with different polarity. The medium effects were accounted for in two ways: (1) implicitly, using the IEFPCM model, varying the dielectric permittivity (ε) and (2) explicitly, by considering hydrogen-bonded complexes of H2As(O)OH with various hydrogen bond donors (41 complexes) or acceptors (38 complexes), imitating a gradual transition to the As(OH)2+ or AsO2- moiety, respectively. It was shown that the transition from vacuum to a medium with ε > 1 causes the As(O)OH fragment to lose its flatness. The solvent polar medium introduces significant changes in the geometry and IR spectral parameters of hydrogen-bonded complexes too: as the polarity of a medium increases, weak hydrogen bonds become weaker, and strong and medium hydrogen bonds become stronger; in the case of a complex with two hydrogen bonds cooperativity effects are observed. In almost all cases the driving force of these changes appears to be preferential solvation of charge-separated structures. In the limiting case of complete deprotonation (or conversely complete protonation) the vibrational frequencies of νAsO and νAs-O turn into νAs-O(asym) and νAs-O(sym), respectively. In the intermediate cases the distance between νAsO and νAs-O is sensitive to both implicit solvation and explicit solvation and the systematic changes of this distance can be used for estimation of the degree of proton transfer within the hydrogen bond.
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Affiliation(s)
- Elena Yu Tupikina
- Institute of Chemistry, St. Petersburg State University, St. Petersburg, Russia.
| | | | - Danil V Krutin
- Institute of Chemistry, St. Petersburg State University, St. Petersburg, Russia.
| | - Peter M Tolstoy
- Institute of Chemistry, St. Petersburg State University, St. Petersburg, Russia.
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Mulloyarova VV, Ustimchuk DO, Filarowski A, Tolstoy PM. H/D Isotope Effects on 1H-NMR Chemical Shifts in Cyclic Heterodimers and Heterotrimers of Phosphinic and Phosphoric Acids. Molecules 2020; 25:molecules25081907. [PMID: 32326122 PMCID: PMC7221807 DOI: 10.3390/molecules25081907] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/27/2020] [Revised: 04/15/2020] [Accepted: 04/19/2020] [Indexed: 11/16/2022] Open
Abstract
Hydrogen-bonded heterocomplexes formed by POOH-containing acids (diphenylphosphoric 1, dimethylphosphoric 2, diphenylphosphinic 3, and dimethylphosphinic 4) are studied by the low-temperature (100 K) 1H-NMR and 31P-NMR using liquefied gases CDF3/CDF2Cl as a solvent. Formation of cyclic dimers and cyclic trimers consisting of molecules of two different acids is confirmed by the analysis of vicinal H/D isotope effects (changes in the bridging proton chemical shift, δH, after the deuteration of a neighboring H-bond). Acids 1 and 4 (or 1 and 3) form heterotrimers with very strong (short) H-bonds (δH ca. 17 ppm). While in the case of all heterotrimers the H-bonds are cyclically arranged head-to-tail, ···O=P-O-H···O=P-O-H···, and thus their cooperative coupling is expected, the signs of vicinal H/D isotope effects indicate an effective anticooperativity, presumably due to steric factors: when one of the H-bonds is elongated upon deuteration, the structure of the heterotrimer adjusts by shortening the neighboring hydrogen bonds. We also demonstrate the formation of cyclic tetramers: in the case of acids 1 and 4 the structure has alternating molecules of 1 and 4 in the cycle, while in case of acids 1 and 3 the cycle has two molecules of 1 followed by two molecules of 3.
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Affiliation(s)
- Valeriia V. Mulloyarova
- Institute of Chemistry, St. Petersburg State University, Universitetskij pr. 26, 198504 St. Petersburg, Russia; (V.V.M.); (D.O.U.)
| | - Daria O. Ustimchuk
- Institute of Chemistry, St. Petersburg State University, Universitetskij pr. 26, 198504 St. Petersburg, Russia; (V.V.M.); (D.O.U.)
| | - Aleksander Filarowski
- Faculty of Chemistry, University of Wrocław, 14 F. Joliot-Curie str., 50-383 Wrocław, Poland;
| | - Peter M. Tolstoy
- Institute of Chemistry, St. Petersburg State University, Universitetskij pr. 26, 198504 St. Petersburg, Russia; (V.V.M.); (D.O.U.)
- Correspondence: ; Tel.: +7-921-430-8191
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Mulloyarova VV, Giba IS, Denisov GS, Ostras' AS, Tolstoy PM. Conformational Mobility and Proton Transfer in Hydrogen-Bonded Dimers and Trimers of Phosphinic and Phosphoric Acids. J Phys Chem A 2019; 123:6761-6771. [PMID: 31305076 DOI: 10.1021/acs.jpca.9b05184] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
Abstract
The monomers, H-bonded cyclic dimers, and trimers of five acids were studied by density functional theory calculations, such as hypophosphorous acid (H2POOH, 1), dimethylphosphinic acid (Me2POOH, 2), phenylphosphinic acid (PhHPOOH, 3), dimethylphosphoric acid ((MeO)2POOH, 4), and diphenylphosphoric acid ((PhO)2POOH, 5). Particular attention was paid to the conformational manifold existing due to the internal degrees of freedom: proton transfer (PT), puckering ("twist") within the ring of H-bonds, and mobility of the substituents (namely, -Ph, -OMe, and -OPh rotations). For acid 3, the number of conformers is additionally increased because of the varying relative orientation of nonequivalent substituents in cyclic complexes. We show that 31P NMR chemical shifts (δP) are very sensitive to the details of the conformation, spanning ranges from ca. 1 ppm (for trimers of acids 1 and 2) to ca. 12 ppm (for trimers of 4). The energy barriers for the transitions between conformers are rather low (<6 kcal/mol for PTs, <2.5 kcal/mol for puckerings, and ca. <3 kcal/mol for rotations of substituents), such that the fast exchange regime in the NMR timescale and subsequent δP averaging are expected. Correlations are proposed linking the change of average δP with the H-bond energy, showing the slope of ca. 4 ppm per kcal/mol. The sensitivity of δP to the OPO angle and the OPOH dihedral angle and the geometries of both H-bonds formed by the POOH moiety are analyzed.
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Affiliation(s)
- Valeriya V Mulloyarova
- Institute of Chemistry , St. Petersburg State University , Universitetskij pr. 26 , 198504 St. Petersburg , Russia
| | - Ivan S Giba
- Institute of Chemistry , St. Petersburg State University , Universitetskij pr. 26 , 198504 St. Petersburg , Russia.,Department of Physics , St. Petersburg State University , Ulyanovskaya 1 , 198504 St. Petersburg , Russia
| | - Gleb S Denisov
- Department of Physics , St. Petersburg State University , Ulyanovskaya 1 , 198504 St. Petersburg , Russia
| | - Alexei S Ostras'
- Institute of Chemistry , St. Petersburg State University , Universitetskij pr. 26 , 198504 St. Petersburg , Russia
| | - Peter M Tolstoy
- Institute of Chemistry , St. Petersburg State University , Universitetskij pr. 26 , 198504 St. Petersburg , Russia
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Giba IS, Mulloyarova VV, Denisov GS, Tolstoy PM. Influence of Hydrogen Bonds in 1:1 Complexes of Phosphinic Acids with Substituted Pyridines on 1H and 31P NMR Chemical Shifts. J Phys Chem A 2019; 123:2252-2260. [PMID: 30807160 DOI: 10.1021/acs.jpca.9b00625] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
Two series of 1:1 complexes with strong OHN hydrogen bonds formed by dimethylphosphinic and phenylphosphinic acids with 10 substituted pyridines were studied experimentally by liquid state NMR spectroscopy at 100 K in solution in a low-freezing polar aprotic solvent mixture CDF3/CDClF2. The hydrogen bond geometries were estimated using previously established correlations linking 1H NMR chemical shifts of bridging protons with the O···H and H···N interatomic distances. A new correlation is proposed allowing one to estimate the interatomic distance within the OHN bridge from the displacement of 31P NMR signal upon complexation. We show that the values of 31P NMR chemical shifts are affected by an additional CH···O hydrogen bond formed between the P═O group of the acid and ortho-CH proton of the substituted pyridines. Breaking of this bond in the case of 2,6-disubstituted bases shifts the 31P NMR signal by ca. 1.5 ppm to the high field.
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Affiliation(s)
- Ivan S Giba
- Institute of Chemistry , St. Petersburg State University , Universitetskij pr. 26 , 198504 St. Petersburg , Russia.,Department of Physics , St. Petersburg State University , Ulyanovskaya 1 , 198504 St. Petersburg , Russia
| | - Valeria V Mulloyarova
- Institute of Chemistry , St. Petersburg State University , Universitetskij pr. 26 , 198504 St. Petersburg , Russia
| | - Gleb S Denisov
- Department of Physics , St. Petersburg State University , Ulyanovskaya 1 , 198504 St. Petersburg , Russia
| | - Peter M Tolstoy
- Institute of Chemistry , St. Petersburg State University , Universitetskij pr. 26 , 198504 St. Petersburg , Russia
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Mulloyarova VV, Giba IS, Kostin MA, Denisov GS, Shenderovich IG, Tolstoy PM. Cyclic trimers of phosphinic acids in polar aprotic solvent: symmetry, chirality and H/D isotope effects on NMR chemical shifts. Phys Chem Chem Phys 2018; 20:4901-4910. [PMID: 29384171 DOI: 10.1039/c7cp08130h] [Citation(s) in RCA: 24] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/01/2023]
Abstract
The hydrogen-bonded self-associates of dimethylphosphinic (1), diphenylphosphoric (2), phenylphosphinic (3), and bis(2,4,4-trimethylpentyl)phosphinic (4) acids have been studied by using liquid-state NMR down to 100 K in a low-freezing polar solvent, CDF3/CDClF2. The H/D isotope effects on 1H NMR chemical shifts caused by partial deuteration of hydroxyl groups unambiguously reveal the stoichiometry of the self-associates and the cooperativity of their hydrogen bonds. In all cases, cyclic trimers are the dominant form, while cyclic dimers are present as a minor form for 1 and 2. Due to the asymmetry of substituents, cyclic trimers of 3 exist in two isomeric forms, depending on the orientation of the phenyl groups with respect to the plane of the hydrogen bonds. The racemic mixture of 4 leads to the coexistence of up to 64 isomers of cyclic trimers, many of which are chemically equivalent or effectively isochronous. The mole fractions of such isomers deviate from the statistically expected values. This feature could provide information about the relative stabilization energies of hydrogen-bonded chiral self-associates. The complexation of 4 with SbCl5 (complex 5) suppresses the self-association and 5 exists exclusively in the monomeric form with chemically non-equivalent 31P nuclei in RS, SR and RR/SS forms.
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Affiliation(s)
- V V Mulloyarova
- Institute of Chemistry, St. Petersburg State University, Russia.
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Carson I, Healy MR, Doidge ED, Love JB, Morrison CA, Tasker PA. Metal-binding motifs of alkyl and aryl phosphinates; versatile mono and polynucleating ligands. Coord Chem Rev 2017. [DOI: 10.1016/j.ccr.2016.11.018] [Citation(s) in RCA: 24] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
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Influence of solvent environment using the CPCM model on the H-bond geometry in the complexes of phosphorus acids with DMSO. Struct Chem 2016. [DOI: 10.1007/s11224-016-0744-7] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/22/2022]
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Fedorova IV, Krestyaninov MA, Kiselev MG, Safonova LP. Solvent effect on proton transfer in the complexes of N,N-dimethylformamide with sulfuric and phosphoric acid: A DFT investigation. J Mol Struct 2016. [DOI: 10.1016/j.molstruc.2015.11.009] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
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Fedorova IV, Khatuntseva EA, Krest’yaninov MA, Safonova LP. C-PCM based calculation of energy profiles for proton transfer in phosphorus-containing acid–N,N-dimethylformamide complexes. RUSSIAN JOURNAL OF PHYSICAL CHEMISTRY A 2016. [DOI: 10.1134/s003602441602014x] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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Fedorova IV, Kiselev MG, Safonova LP. Computer simulation study of the intermolecular structure of phosphoric acid-N,N-dimethylformamide mixtures. J Mol Model 2015; 21:17. [PMID: 25617205 DOI: 10.1007/s00894-014-2542-8] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/16/2014] [Accepted: 11/24/2014] [Indexed: 10/24/2022]
Abstract
The structures and energies of the complexes (H3PO4)2, H3PO4-DMF, and (H3PO4)2-DMF were analyzed at the B3LYP level of approximation. It was found that H-bonds form between H3PO4 and DMF molecules, but the strength of the H-bond depends strongly on its molecular environment. Effects of the solvent were taken into account via the CPCM approach. According to the B3LYP-СPCM calculations, the O···O distance in (H3PO4)2-DMF is shorter and its H-bonds are stronger than in the other complexes studied. In order to study the effects of concentration on the intermolecular structure, molecular dynamics simulations of H3PO4-DMF mixtures with mole fractions of acid of <0.1 were performed. The calculations indicated that the largest fraction of the acid protons are involved in hydrogen bonding with oxygen atoms of the DMF molecules. An increased probability of acid-acid hydrogen-bond formation at phosphoric acid mole fractions >0.06 was also noted.
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Affiliation(s)
- Irina V Fedorova
- G. A. Krestov Institute of Solution Chemistry of Russian Academy of Sciences, 1 Akademicheskaya Street, Ivanovo, 153045, Russia,
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Rekik N, Ghalla H, Hanna G. Explaining the Structure of the OH Stretching Band in the IR Spectra of Strongly Hydrogen-Bonded Dimers of Phosphinic Acid and Their Deuterated Analogs in the Gas Phase: A Computational Study. J Phys Chem A 2012; 116:4495-509. [DOI: 10.1021/jp3016084] [Citation(s) in RCA: 43] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Najeh Rekik
- Department of Chemistry, University of Alberta, Edmonton, Alberta,
Canada
| | - Houcine Ghalla
- Laboratoire
de Physique
Quantique, Faculté des Sciences de Monastir, 5000 route de Kairouan, Tunisia
| | - Gabriel Hanna
- Department of Chemistry, University of Alberta, Edmonton, Alberta,
Canada
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Fedorova IV, Kiselev MG, Safonova LP. The intermolecular structure of phosphoric acid–N,N-dimethylformamide mixtures as studied by computer simulation. J Chem Phys 2011; 134:174506. [DOI: 10.1063/1.3587106] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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Fedorova IV, Krishtal SP, Kiselev MG, Safonova LP. Structure of orthophosphoric Acid-N,N-dimethylformamide complexes. RUSSIAN JOURNAL OF PHYSICAL CHEMISTRY A 2006. [DOI: 10.1134/s0036024406130024] [Citation(s) in RCA: 16] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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Asfin R, Denisov G, Tokhadze K. The ν(OH/OD) band shape of strong hydrogen bonded dimers of phosphinic acids. Phenomenology and formation models. J Mol Struct 2006. [DOI: 10.1016/j.molstruc.2006.03.037] [Citation(s) in RCA: 22] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
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