1
|
Matamoros E, Pérez EMS, Light ME, Cintas P, Martínez RF, Palacios JC. A True Reverse Anomeric Effect Does Exist After All: A Hydrogen Bonding Stereocontrolling Effect in 2-Iminoaldoses. J Org Chem 2024; 89:7877-7898. [PMID: 38752850 PMCID: PMC11165589 DOI: 10.1021/acs.joc.4c00562] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/03/2024] [Revised: 04/18/2024] [Accepted: 04/29/2024] [Indexed: 06/13/2024]
Abstract
The reverse anomeric effect is usually associated with the equatorial preference of nitrogen substituents at the anomeric center. Once postulated as another anomeric effect with explanations ranging from electrostatic interactions to delocalization effects, it is now firmly considered to be essentially steric in nature. Through an extensive research on aryl imines from 2-amino-2-deoxyaldoses, spanning nearly two decades, we realized that such substances often show an anomalous anomeric behavior that cannot easily be rationalized on the basis of purely steric grounds. The apparent preference, or stabilization, of the β-anomer takes place to an extent that not only neutralizes but also overcomes the normal anomeric effect. Calculations indicate that there is no stereoelectronic effect opposing the anomeric effect, resulting from the repulsion between electron lone pairs on the imine nitrogen and the endocyclic oxygen. Such data and compelling structural evidence unravel why the exoanomeric effect is largely inhibited. We are now confident, as witnessed by 2-iminoaldoses, that elimination of the exo-anomeric effect in the α-anomer is due to the formation of an intramolecular hydrogen bond between the anomeric hydroxyl and the iminic nitrogen, thereby accounting for a true electronic effect. In addition, discrete solvation may help justify the observed preference for the β-anomer.
Collapse
Affiliation(s)
- Esther Matamoros
- Departamento
de Química Orgánica e Inorgánica, Facultad de
Ciencias, and Instituto del Agua, Cambio Climático y Sostenibilidad
(IACYS), Universidad de Extremadura, 06006 Badajoz, Spain
- Departamento
de Química Orgánica, Universidad
de Málaga, Campus
Teatinos s/n, 29071 Málaga, Spain
- Instituto
de Investigación Biomédica de Málaga y Plataforma
en Nanomedicina − IBIMA, Plataforma Bionand, Parque Tecnológico de Andalucía, 29590 Málaga, Spain
| | - Esther M. S. Pérez
- Departamento
de Química Orgánica e Inorgánica, Facultad de
Ciencias, and Instituto del Agua, Cambio Climático y Sostenibilidad
(IACYS), Universidad de Extremadura, 06006 Badajoz, Spain
| | - Mark E. Light
- Department
of Chemistry, Faculty of Natural and Environmental Sciences, University of Southampton, Southampton SO17 1BJ, U.K.
| | - Pedro Cintas
- Departamento
de Química Orgánica e Inorgánica, Facultad de
Ciencias, and Instituto del Agua, Cambio Climático y Sostenibilidad
(IACYS), Universidad de Extremadura, 06006 Badajoz, Spain
| | - R. Fernando Martínez
- Departamento
de Química Orgánica e Inorgánica, Facultad de
Ciencias, and Instituto del Agua, Cambio Climático y Sostenibilidad
(IACYS), Universidad de Extremadura, 06006 Badajoz, Spain
| | - Juan C. Palacios
- Departamento
de Química Orgánica e Inorgánica, Facultad de
Ciencias, and Instituto del Agua, Cambio Climático y Sostenibilidad
(IACYS), Universidad de Extremadura, 06006 Badajoz, Spain
| |
Collapse
|
2
|
Matamoros E, Cintas P, Light ME, Palacios JC. Electronic effects in tautomeric equilibria: the case of chiral imines from d-glucamine and 2-hydroxyacetophenones. Org Biomol Chem 2019; 17:10209-10222. [PMID: 31774417 DOI: 10.1039/c9ob02147g] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
A one-pot procedure for preparing a series of chiral imines by direct condensation of d-glucamine with 2-hydroxyacetophenones is described. Under conventional acetylation an unexpected mixture of two different peracetylated molecules is obtained, one with an open enamine structure, and the other incorporating an N-acetyl-1,3-oxazolidine into the acyclic skeleton. Surprisingly, both molecules coexist within the crystal's unit cell, as inferred from single-crystal X-ray analysis of a 5-bromo-substituted aryl derivative. Moreover, the 1,3-oxazolidine ring exists as rotational conformers (E,Z) owing to the restricted rotation around the N-acetyl bond. The equilibrium involving imine and enamine structures has been assessed in detail, providing in addition linear free-energy relationships between the tautomerization constants (KT) and the electronic effect of the substituents.
Collapse
Affiliation(s)
- Esther Matamoros
- Departamento de Química Orgánica e Inorgánica, Facultad de Ciencias, and IACYS-Unidad de Química Verde y Desarrollo Sostenible, Universidad de Extremadura, E-06006 Badajoz, Spain.
| | - Pedro Cintas
- Departamento de Química Orgánica e Inorgánica, Facultad de Ciencias, and IACYS-Unidad de Química Verde y Desarrollo Sostenible, Universidad de Extremadura, E-06006 Badajoz, Spain.
| | - Mark E Light
- Department of Chemistry, Faculty of Natural and Environmental Sciences, The University of Southampton, Southampton SO17 1BJ, UK
| | - Juan C Palacios
- Departamento de Química Orgánica e Inorgánica, Facultad de Ciencias, and IACYS-Unidad de Química Verde y Desarrollo Sostenible, Universidad de Extremadura, E-06006 Badajoz, Spain.
| |
Collapse
|
3
|
Basic study for acyl chitosan isothiocyanates synthesis by model experiments using glucosamine derivatives. Int J Biol Macromol 2019; 132:17-23. [PMID: 30910677 DOI: 10.1016/j.ijbiomac.2019.03.114] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/30/2018] [Revised: 02/16/2019] [Accepted: 03/18/2019] [Indexed: 11/24/2022]
Abstract
Affecting factors to the acyl chitosan isothiocyanate synthesis by N-phenylthiocarbamoylation and the following acylation was investigated using octyl 2-amino-2-deoxy-β-D-glucopyranoside as a model compound. It was found from the acetylation of N-phenylthiocarbamoyl glucosamine derivative with acetic anhydride/pyridine that the glucosamine isothiocyanate was formed via N,N-(acetyl)phenylthiocarbamoyl glucosamine derivative and the conversion of N,N-(acetyl)phenylthiocarbamoyl glucosamine derivative to the glucosamine isothiocyanate proceeded mainly by thermal degradation of N,N-(acetyl)phenylthiocarbamoyl groups. The reaction temperature was an important factor to the isothiocyanate synthesis. On the other hand, it was found from the acetylation of N-ethylthiocarbamoyl derivative (or N-allylthiocarbamoyl derivative) with acetic anhydride/pyridine that the glucosamine isothiocyanate was also prepared from N-ethylthiocarbamoyl glucoamine derivative (or N-allylthiocarbamoyl glucosamine derivative), but that N-phenylthiocarbamoylation was more preferable to the isothiocyanate synthesis than N-ethylthiocarbamoylation and N-allylthiocarbamoylation. Then, acylation products of N-phenylthiocarbamoyl chitosan (N,N-(hexanoyl)phenylthiocarbamoyl chitosan hexanoate or hexanoyl chitosan isothiocynate) could be controlled by the reaction temperature and reaction system.
Collapse
|
4
|
Baumann M, Baxendale IR. Sustainable Synthesis of Thioimidazoles via Carbohydrate-Based Multicomponent Reactions. Org Lett 2014; 16:6076-9. [DOI: 10.1021/ol502845h] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/22/2023]
Affiliation(s)
- Marcus Baumann
- Department
of Chemistry, Durham University, South Road, Durham, DH1
3LE, United Kingdom
| | - Ian R. Baxendale
- Department
of Chemistry, Durham University, South Road, Durham, DH1
3LE, United Kingdom
| |
Collapse
|
5
|
Silvero G, Ávalos M, Babiano R, Cintas P, Jiménez JL, Palacios JC. A bioinspired look at the glucosinolate metabolic pathway. Structural insights into the reaction of benzyl isothiocyanate and d-glucosamine. Tetrahedron 2011. [DOI: 10.1016/j.tet.2011.07.073] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
|
6
|
Ávalos M, Babiano R, Cintas P, Hursthouse MB, Jiménez JL, Light ME, Palacios JC, Pérez EMS. Synthesis of Sugar Isocyanates and Their Application to the Formation of Ureido-Linked Disaccharides. European J Org Chem 2006. [DOI: 10.1002/ejoc.200500601] [Citation(s) in RCA: 30] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
|
7
|
Ávalos M, Babiano R, Cintas P, Hursthouse MB, Jiménez JL, Light ME, Palacios JC, Silvero G. Non-biaryl atropisomers derived from carbohydrates. Part 3: Rotational isomerism of sterically hindered heteroaryl imidazolidine-2-ones and 2-thiones. Tetrahedron 2005. [DOI: 10.1016/j.tet.2005.06.017] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/25/2022]
|
8
|
Ávalos M, Babiano R, Cintas P, Hursthouse MB, Jiménez JL, Light ME, Palacios JC, Silvero G. Non-biaryl atropisomers derived from carbohydrates. Part 4: Absolute stereochemistry of carbohydrate-based imidazolidine-2-ones and 2-thiones with axial and central chirality. Tetrahedron 2005. [DOI: 10.1016/j.tet.2005.06.018] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
|
9
|
|
10
|
García Fernández J, Mellet CO. Chemistry and developments of N-thiocarbonyl carbohydrate derivatives: Sugar isothiocyanates, thioamides, thioureas, thiocarbamates, and their conjugates. Adv Carbohydr Chem Biochem 2000. [DOI: 10.1016/s0065-2318(00)55004-5] [Citation(s) in RCA: 64] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
|
11
|
|
12
|
Fernández-Bolaños JG, Zafra E, López O, Robina I, Fuentes J. Stereoselective synthesis of imidazolidine, imidazoline and imidazole C- and N-pseudonucleosides. ACTA ACUST UNITED AC 1999. [DOI: 10.1016/s0957-4166(99)00314-6] [Citation(s) in RCA: 17] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
|
13
|
Avalos M, Babiano R, Cintas P, Higes FJ, Jiménez J, Palacios JC, Silvero G, Valencia C. Non-biaryl atropisomers derived from carbohydrates. Part 2. Atropisomeric behavior of monocyclic and bicyclic imidazolidine-2-ones and 2-thiones. Tetrahedron 1999. [DOI: 10.1016/s0040-4020(99)00110-6] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
|
14
|
Avalos M, Babiano R, Cintas P, Jiménez J, Palacios JC, Silvero G, Valencia C. Non-biaryl atropisomers derived from carbohydrates. Part 1. Stereoselective synthesis of 1-aryl-5-hydroxyimidazolidine-2-thiones and their transformation into imidazoline-2-thiones. Tetrahedron 1999. [DOI: 10.1016/s0040-4020(99)00109-x] [Citation(s) in RCA: 18] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
|
15
|
Tournaire-Arellano C, Hage SY, Valès P, Caujolle R, Sanon A, Bories C, Loiseau PM. Synthesis and biological evaluation of ureido and thioureido derivatives of 2-amino-2-deoxy-D-glucose and related aminoalcohols as N-acetyl-beta-D-hexosaminidase inhibitors. Carbohydr Res 1998; 314:47-63. [PMID: 10230037 DOI: 10.1016/s0008-6215(98)00286-9] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
Abstract
Ureido and thioureido derivatives of 2-acetamido-2-deoxy-beta-D-glucose, 1-amino-1-deoxy-D-glucitol and 2-(2-aminoethoxy)ethanol were prepared as N-acetyl-beta-D-hexosaminidase (NAHase) inhibitors and were evaluated on Trichomonas vaginalis NAHase. Although none showed complete inhibition of the enzyme at 100 microM, 1-amino-1-deoxy-D-glucitol derivatives acted as competitive inhibitors of the NAHase of T. vaginalis.
Collapse
|
16
|
Shaban MA. The Chemistry of C-Nucleosides and Their Analogs II: C-Nucleosides of Condensed Heterocyclic Bases. ADVANCES IN HETEROCYCLIC CHEMISTRY 1997. [DOI: 10.1016/s0065-2725(08)60931-9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 03/08/2023]
|
17
|
Shaban MA, Nasr AZ. The Chemistry of C-Nucleosides and Their Analogs I: C-Nucleosides of Hetero Monocyclic Bases. ADVANCES IN HETEROCYCLIC CHEMISTRY 1997. [DOI: 10.1016/s0065-2725(08)60363-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 03/08/2023]
|
18
|
|
19
|
Stereoselective synthesis of nucleoside analogues of chiral imidazolidines from sugar isothiocyanates. ACTA ACUST UNITED AC 1996. [DOI: 10.1016/0957-4166(95)00437-8] [Citation(s) in RCA: 15] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
|
20
|
Del Valle JL, Torroba T, Marcaccini S, Paoli P, Williams DJ. Diastereoselective synthesis of C-glycosylnorbornenones. Tetrahedron 1995. [DOI: 10.1016/0040-4020(95)00428-b] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/16/2022]
|