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Struble MD, Holl MG, Coombs G, Siegler MA, Lectka T. Synthesis of a Tight Intramolecular OH···Olefin Interaction, Probed by IR, 1H NMR, and Quantum Chemistry. J Org Chem 2015; 80:4803-7. [DOI: 10.1021/acs.joc.5b00470] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Mark D. Struble
- Department
of Chemistry, New Chemistry Building, Johns Hopkins University, 3400
North Charles Street, Baltimore, Maryland 21218 United States
| | - Maxwell Gargiulo Holl
- Department
of Chemistry, New Chemistry Building, Johns Hopkins University, 3400
North Charles Street, Baltimore, Maryland 21218 United States
| | - Gavin Coombs
- Department
of Chemistry, New Chemistry Building, Johns Hopkins University, 3400
North Charles Street, Baltimore, Maryland 21218 United States
| | - Maxime A. Siegler
- Department
of Chemistry, New Chemistry Building, Johns Hopkins University, 3400
North Charles Street, Baltimore, Maryland 21218 United States
| | - Thomas Lectka
- Department
of Chemistry, New Chemistry Building, Johns Hopkins University, 3400
North Charles Street, Baltimore, Maryland 21218 United States
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Hansen HJ, Sutter B, Schmid H. Die Dienol-Benzol-Umlagerung von Allyldienolen: aromatische [1,2]-, [3,3]- und [3,4]-sigmatropische Umlagerungen. Helv Chim Acta 2011. [DOI: 10.1002/hlca.660510422] [Citation(s) in RCA: 42] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
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3
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Nishio M, Umezawa Y, Honda K, Tsuboyama S, Suezawa H. CH/π hydrogen bonds in organic and organometallic chemistry. CrystEngComm 2009. [DOI: 10.1039/b902318f] [Citation(s) in RCA: 481] [Impact Index Per Article: 32.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/23/2022]
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Conformational Analysis of Intramolecular-Hydrogen-Bonded Compounds in Dilute Solution by Infrared Spectroscopy. ACTA ACUST UNITED AC 2007. [DOI: 10.1002/9780470147207.ch1] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register]
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Chass GA, Mirasol RS, Setiadi DH, Tang TH, Chin W, Mons M, Dimicoli I, Dognon JP, Viskolcz B, Lovas S, Penke B, Csizmadia IG. Characterization of the Conformational Probability of N-Acetyl-Phenylalanyl-NH2 by RHF, DFT, and MP2 Computation and AIM Analyses, Confirmed by Jet-Cooled Infrared Data. J Phys Chem A 2005; 109:5289-302. [PMID: 16839052 DOI: 10.1021/jp040720i] [Citation(s) in RCA: 32] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
Computational and experimental determinations were carried out in parallel on the conformational probability of N-Acetyl-Phenylalanine-NH2 (NAPA). Ab initio computations were completed at the BLYP/6-311G(df,p), B3LYP/6-31G(d), B3LYP/6-31G(d,p), and B3LYP/6-31+G(d) levels of theory, labeled L/61fp, B/6, B/6p, and B/6+, respectively. Three experimentally identified conformers were compared with theoretical data, confirming their identities as the betaLanti, gammaLgauche+, and gammaLgauche- (BACKBONESIDECHAIN) conformers. Evidence comes from matching experimental and theoretical data for all three constituent N-H stretches of NAPA, with a Delta(Experimental-Theoretical) = approximately 1-3 cm(-1), approximately 0-5 cm(-1), and approximately 1-6 cm(-1), at the L/61fp and B/6+ levels, respectively. Corrected-ZPE relative energies were computed to be 0.14, 0.00, 0.26 and 0.00, 0.67, 0.57 (kcal*mol(-1)) for the betaLanti, gammaLgauche+, and gamma(Lgauche- conformers, respectively, at the L/61fp and B/6+ levels, respectively. The MP2/6-31+G(d) level of theory was subsequently found to give similar relative energies. Characterization of the intramolecular interactions responsible for red and blue shifting of the N-H stretches showed the existence of the following intramolecular interactions: C=O[i]- - -HN[i], (Ar[i])-Cgamma- - -HN[i+1], (Ar[i])-Cdelta-H- - -O=C[i-1] for betaLanti; C=O[i-1]- - -HN[i+1], (Ar[i])-Cgamma- - -HN[i+1], (Ar[i])-C-H- - -O=C[i] for gammaLgauche+; and C=O[i-1]- - -HN[i+1] for gammaLgauche-. Each of these interactions were further investigated and subsequently characterized by orbital population and Atoms-In-Molecules (AIM) analyses, with the identity of overlap and bond critical points (BCP) serving as 'scoring criteria', respectively. Experimental and theoretical carbonyl stretches were also compared and showed good agreement, adding further strength to the synergy between experiment and theory.
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Affiliation(s)
- Gregory A Chass
- Global Institute of COmputational Molecular and Materials Science (GIOCOMMS), 2-158 Major Street, Toronto, Ontario M5S 2K2, Canada.
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Ammann W, Jäggi FJ, Ganter C. Heterodiamantane und strukturell verwandte Verbindungen II. Pentacyclische Diäther der C10-Reihe: 5,12-Dioxapentacyclo-[6.4.0.02,6.04,9]dodecan und 4,12-Dioxapentacyclo[6.3.1.02,7.03,10.05,9]- dodecan. Helv Chim Acta 2004. [DOI: 10.1002/hlca.19800630730] [Citation(s) in RCA: 14] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
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7
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Dillenberger Z, Schmid H, Hansen HJ. Untersuchungen über Allylgruppenwanderungen in aliphatischen Carbenium-Ionen. Helv Chim Acta 2004. [DOI: 10.1002/hlca.19780610531] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
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8
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Ueji SI, Taniguchi T, Okamoto T, Watanabe K, Ebara Y, Ohta H. Flexibility of Lipase Brought About by Solvent Effects Controls Its Enantioselectivity in Organic Media. BULLETIN OF THE CHEMICAL SOCIETY OF JAPAN 2003. [DOI: 10.1246/bcsj.76.399] [Citation(s) in RCA: 15] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
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9
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Bjerkeseth LH, Bakke JM, Uggerud E. Inter- and intramolecular O–H⋯π hydrogen bonding in the methanol–ethene complex and syn -7-norbornenol, probed by IR, 1 H NMR and quantum chemistry. J Mol Struct 2001. [DOI: 10.1016/s0022-2860(01)00563-4] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
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Watanabe K, Koshiba T, Yasufuku Y, Miyazawa T, Ueji S. Effects of substituent and temperature on enantioselectivity for lipase-catalyzed esterification of 2-(4-substituted phenoxy) propionic acids in organic solvents. Bioorg Chem 2001; 29:65-76. [PMID: 11300696 DOI: 10.1006/bioo.2000.1190] [Citation(s) in RCA: 17] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
Abstract
Substituent effects on the enantioselectivity for the lipase-catalyzed esterifications in organic solvents were studied by use of 2-(4-substituted phenoxy)propionic acids as the substrates with various substituents of H, F, Cl, CF(3), CH(3), CH(3)CH(2), and CH(3)O. The distinction in the behavior of their enantioselectivity was primarily responsible for the size effects of the substituents, although the substituents are far away from the stereocenter of the substrates. For the similar substituents in size, CH(3) and CF(3), however, their electronic effects played an important role in controlling the enantioselectivity. This variation of the enantioselectivity due to the electronic effects is also supported by the discussion based on the value of the Michaelis constant (K(m)) obtained. In addition, by raising the reaction temperature with enough water added to isopropyl ether as the reaction medium, the enantioselectivity is found to be dramatically enhanced for the substrate bearing CH(3)O group due to the strong electron-donating effect.
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Affiliation(s)
- K Watanabe
- The Graduate School of Science and Technology, Kobe University, Japan.
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Bakke JM, Bjerkeseth LH. The conformational composition of 3-buten-1-ol, the importance of intramolecular hydrogen bonding. J Mol Struct 1998. [DOI: 10.1016/s0022-2860(98)00366-4] [Citation(s) in RCA: 20] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
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13
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Umezawa Y, Tsuboyama S, Honda K, Uzawa J, Nishio M. CH/πInteraction in the Crystal Structure of Organic Compounds. A Database Study. BULLETIN OF THE CHEMICAL SOCIETY OF JAPAN 1998. [DOI: 10.1246/bcsj.71.1207] [Citation(s) in RCA: 330] [Impact Index Per Article: 12.7] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
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Bakke JM, Bjerkeseth LH. Rotational isomerism around the C–O bond in saturated acyclic alcohols—assignment of the experimental IR hydroxyl stretch bands using semiempirical MO and ab initio calculations. J Mol Struct 1997. [DOI: 10.1016/s0022-2860(96)09726-8] [Citation(s) in RCA: 16] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
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Wagner PJ, Zand A, Park BS. Entropy vs Enthalpy Control of 1,5-Biradical Cyclization in the Photochemistry of α-(o-Alkylphenyl)acetophenones. J Am Chem Soc 1996. [DOI: 10.1021/ja962683h] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Peter J. Wagner
- Chemistry Department, Michigan State University East Lansing, Michigan 48824
| | - Ali Zand
- Chemistry Department, Michigan State University East Lansing, Michigan 48824
| | - Bong-Ser Park
- Chemistry Department, Michigan State University East Lansing, Michigan 48824
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Nishio M, Umezawa Y, Hirota M, Takeuchi Y. The CH/π interaction: Significance in molecular recognition. Tetrahedron 1995. [DOI: 10.1016/0040-4020(94)01066-9] [Citation(s) in RCA: 514] [Impact Index Per Article: 17.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
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17
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Barrero AF, Molina J, Enrique Oltra J, Altarejos J, Barragán A, Lara A, Segura M. Stereochemistry of 14-hydroxy-β-caryophyllene and related compounds. Tetrahedron 1995. [DOI: 10.1016/0040-4020(95)00104-g] [Citation(s) in RCA: 30] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/27/2022]
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Hanaya K, Muramatsu T, Onodera S, Ikegami Y, Hirota M. Conformations of 3-Alkoxycarbonyl-1-tetralols and 2-Ethoxycarbonyl-4-chromanols. BULLETIN OF THE CHEMICAL SOCIETY OF JAPAN 1984. [DOI: 10.1246/bcsj.57.1695] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
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Aspiala A, Lotta T, Murto J, Räsänen M. IR‐induced photorotamerization of allyl alcohol in low‐temperature matrices and ab initio calculations. J Chem Phys 1983. [DOI: 10.1063/1.446344] [Citation(s) in RCA: 33] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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Microwave spectrum of bicyclo[2,2,1] hepta-2,5-dien-7-ol and spectroscopic evidence for an intramolecular (OH ⋯ π) hydrogen bond. J Mol Struct 1983. [DOI: 10.1016/0022-2860(83)85064-9] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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Zushi S, Kodama Y, Fukuda Y, Nishihata K, Nishio M, Hirota M, Uzawa J. An Occurrence of Attractive Alkyl-Phenyl Interaction. The Conformations of Several 1-Phenyl-2-alkanols. BULLETIN OF THE CHEMICAL SOCIETY OF JAPAN 1981. [DOI: 10.1246/bcsj.54.2113] [Citation(s) in RCA: 35] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
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26
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Al-Ekabi H, Derwish G, Adam G, Schreiber K. Photodimerization of dimethyl 3-dehydrogibberellenate and subsequent photoepimerization and cleavage reactions. Tetrahedron 1981. [DOI: 10.1016/s0040-4020(01)98938-0] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
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Kamada T, Yamamoto O. PREFERRED CONFORMATIONS OF 9-MONOSUBSTITUTED DERIVATIVES OF 8,9,10,11-TETRAHYDRO-7 H-CYCLOOCTA[ de]NAPHTHALENE. CHEM LETT 1980. [DOI: 10.1246/cl.1980.111] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
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Mori N, Kasuya SI, Miyazaki H, Takezawa T. Prefered Orientation and π-Bonding of the Hydroxyl Group in 1,2-Benzocycloalken-3-ols. BULLETIN OF THE CHEMICAL SOCIETY OF JAPAN 1979. [DOI: 10.1246/bcsj.52.1423] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
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Research on 1-aza two-ring systems. Chem Heterocycl Compd (N Y) 1978. [DOI: 10.1007/bf00470562] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/26/2022]
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Hansen HJ. Aromatische sigmatropische Wasserstoffverschiebungen in 2-Vinyl- und 2-Allylphenolen. Helv Chim Acta 1977. [DOI: 10.1002/hlca.19770600624] [Citation(s) in RCA: 16] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
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Kodama Y, Nishihata K, Nishio M, Nakagawa N. Attractive interaction between aliphatic and aromatic systems. Tetrahedron Lett 1977. [DOI: 10.1016/s0040-4039(01)83692-3] [Citation(s) in RCA: 60] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/17/2022]
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Haller R, Schneider HJ. [NMR- and IR-studies of the stereochemistry of 1,1-diphenyl-alkanes-2-ols (author's transl)]. Arch Pharm (Weinheim) 1974; 307:151-7. [PMID: 4825992 DOI: 10.1002/ardp.19743070213] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.0] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/12/2023]
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Watanabe S, Suga T, Shishibori T, Matsuura T. Stereochemical Studies of Monoterpene Compounds. X. Intramolecular Interaction of Oxirane and Cyclopropane Rings with a Hydroxyl Group. BULLETIN OF THE CHEMICAL SOCIETY OF JAPAN 1971. [DOI: 10.1246/bcsj.44.204] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
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Iwamura H, Hanaya K. νO–HAbsorptions and Conformations of Epimeric 1-Tetralols and Chroman-4-ols. BULLETIN OF THE CHEMICAL SOCIETY OF JAPAN 1970. [DOI: 10.1246/bcsj.43.3901] [Citation(s) in RCA: 21] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
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Oki M, Iwamura H, Murayama T, Oka I. Intramolecular Interaction between the Hydroxyl Group and the Cyclopropane Ring. BULLETIN OF THE CHEMICAL SOCIETY OF JAPAN 1969. [DOI: 10.1246/bcsj.42.1986] [Citation(s) in RCA: 13] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
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Tochtermann W, Horstmann HO. Darstellung und thermolyse eines tetraphenyltribenzocycloheptatrienyl-chlorsulfits. Tetrahedron Lett 1969. [DOI: 10.1016/s0040-4039(01)87831-x] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
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