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Latxague L, Patwa A, Amigues E, Barthélémy P. Glycosyl-Nucleolipids as new bioinspired amphiphiles. Molecules 2013; 18:12241-63. [PMID: 24084025 PMCID: PMC6270249 DOI: 10.3390/molecules181012241] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/28/2013] [Revised: 09/25/2013] [Accepted: 09/25/2013] [Indexed: 11/26/2022] Open
Abstract
Four new Glycosyl-NucleoLipid (GNL) analogs featuring either a single fluorocarbon or double hydrocarbon chains were synthesized in good yields from azido thymidine as starting material. Physicochemical studies (surface tension measurements, differential scanning calorimetry) indicate that hydroxybutanamide-based GNLs feature endothermic phase transition temperatures like the previously reported double chain glycerol-based GNLs. The second generation of GNFs featuring a free nucleobase reported here presents a better surface activity (lower γlim) compared to the first generation of GNFs.
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Zhou C, Chattopadhyaya J. Intramolecular free-radical cyclization reactions on pentose sugars for the synthesis of carba-LNA and carba-ENA and the application of their modified oligonucleotides as potential RNA targeted therapeutics. Chem Rev 2012; 112:3808-32. [PMID: 22530946 DOI: 10.1021/cr100306q] [Citation(s) in RCA: 39] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/24/2022]
Affiliation(s)
- Chuanzheng Zhou
- Chemical Biology Program, Department of Cell and Molecular Biology, Biomedical Center, Uppsala University, Sweden
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N(3)-Protection of Thymidine with Boc for an Easy Synthetic Access to Sugar-Alkylated Nucleoside Analogs. Chem Biodivers 2012; 9:589-97. [DOI: 10.1002/cbdv.201100103] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
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4
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Lucas R, Elchinger PH, Faugeras PA, Zerrouki R. Pyrimidine-purine and pyrimidine heterodinucleosides synthesis containing a triazole linkage. NUCLEOSIDES NUCLEOTIDES & NUCLEIC ACIDS 2010; 29:168-77. [PMID: 20408048 DOI: 10.1080/15257771003708579] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/19/2022]
Abstract
This article describes a synthetic route to generate two purine-pyrimidine and pyrimidine heterodinucleosides. Both microwave activated regioselective alkylation using hydride and copper-catalyzed-azide-alkyne-cycloaddition (CuAAC) were used in order to perform the synthesis.
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Affiliation(s)
- R Lucas
- Faculte des Sciences et Techniques, Universite de Limoges, Laboratoire de Chimie des Substances Naturelles, Limoges, France
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Chelation-controlled regioselective alkylation of pyrimidine 2'-deoxynucleosides. Carbohydr Res 2009; 345:199-207. [PMID: 19932891 DOI: 10.1016/j.carres.2009.10.021] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/10/2009] [Revised: 10/23/2009] [Accepted: 10/27/2009] [Indexed: 11/22/2022]
Abstract
Protection-deprotection steps, which are usually needed for regioselective alkylation of pyrimidine deoxynucleosides, can be avoided by choosing the appropriate solvent. The combined effects of low dielectric constant and possible sodium chelation by pyrimidine nucleosides may account for the unexpected regioselectivity observed in THF.
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Lucas R, Zerrouki R, Granet R, Krausz P, Champavier Y. A rapid efficient microwave-assisted synthesis of a 3′,5′-pentathymidine by copper(I)-catalyzed [3+2] cycloaddition. Tetrahedron 2008. [DOI: 10.1016/j.tet.2008.04.006] [Citation(s) in RCA: 50] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
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8
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Teste K, Colombeau L, Hadj-Bouazza A, Lucas R, Zerrouki R, Krausz P, Champavier Y. Solvent-controlled regioselective protection of 5'-O-protected thymidine. Carbohydr Res 2008; 343:1490-5. [PMID: 18479677 DOI: 10.1016/j.carres.2008.04.026] [Citation(s) in RCA: 15] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/18/2008] [Revised: 04/16/2008] [Accepted: 04/17/2008] [Indexed: 10/22/2022]
Abstract
This paper describes an efficient procedure for selective 3'-O- or 3-N-protection of 5'-O-tert-butyldimethylsilylthymidine, depending on the use of aprotic polar solvents with low or high dielectric constant, respectively. These syntheses were activated by either ultrasound or microwaves. Several alkyl bromides offer a convenient route to prepare 3'-O- or 3-N-protected and functionalized thymidine derivatives.
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Affiliation(s)
- K Teste
- Laboratoire de Chimie des Substances Naturelles EA1069, Faculté des Sciences et Techniques, 123 Avenue Albert Thomas, F-87060 Limoges, France
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9
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Lucas R, Neto V, Hadj Bouazza A, Zerrouki R, Granet R, Krausz P, Champavier Y. Microwave-assisted synthesis of a triazole-linked 3′–5′ dithymidine using click chemistry. Tetrahedron Lett 2008. [DOI: 10.1016/j.tetlet.2007.12.012] [Citation(s) in RCA: 47] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
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Roy V, Zerrouki R, Krausz P. New dinucleoside analogues via cross-coupling metathesis. NUCLEOSIDES NUCLEOTIDES & NUCLEIC ACIDS 2005; 24:289-301. [PMID: 16021919 DOI: 10.1081/ncn-60595] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/03/2022]
Abstract
Synthesis of 3'-3', 5-5', and 3'-5' dimeric thymidine, linked by an olefinic chain between glycosidic moieties is described. Cross metathesis reaction of 3' or 5' O-allyl analogues of thymidine led to the expected 3'-3' and 5'-5' dimeric compounds, respectively. In order to obtain the 3'-5' dimer, 5'-O-allyl and 3'-O-allyl monomers were first linked by their free 3' OH and 5' OH groups through a glutaryl spacer; ring closing metathesis was then operated upon this temporary dimer, followed by glutaryl removal.
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Affiliation(s)
- Vincent Roy
- Laboratoire de Chimie des Substances Naturelles, Faculté des Sciences et Techniques, Université de Limoges, 123, Ave. Albert Thomas, Limoges 87060, France
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11
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Børsting P, Freitag M, Nielsen P. Dinucleotides containing two allyl groups by combinations of allyl phosphotriesters, 5-allyl-, 2′-O-allyl- and 2′-arabino-O-allyl uridine derivatives as substrates for ring-closing metathesis. Tetrahedron 2004. [DOI: 10.1016/j.tet.2004.09.023] [Citation(s) in RCA: 21] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/26/2022]
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12
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Roy V, Colombeau L, Zerrouki R, Krausz P. One step selective 5′-O-allylation of thymidine using microwave or ultrasound activation. Carbohydr Res 2004; 339:1829-31. [PMID: 15220095 DOI: 10.1016/j.carres.2004.04.008] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/24/2004] [Revised: 04/19/2004] [Accepted: 04/21/2004] [Indexed: 11/26/2022]
Abstract
An improved procedures for the synthesis of 5'-O-allylthymidine via one step selective allylation of thymidine using either ultrasound or microwave activation is described.
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Affiliation(s)
- Vincent Roy
- Université de Limoges, Laboratoire de Chimie des Substances Naturelles, Faculté des Sciences et Techniques, 123 Avenue Albert Thomas, F-87060 Limoges, France
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Montembault M, Bourgougnon N, Lebreton J. Synthesis of 4′-C, 3′-O bicyclic thymidine analogues using ring closure metathesis. Tetrahedron Lett 2002. [DOI: 10.1016/s0040-4039(02)01926-3] [Citation(s) in RCA: 26] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
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14
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Díaz Y, El-Laghdach A, Castillón S. Synthesis of 2′-deoxy-2′-phenylselenenyl-furanosyl nucleosides from glycals using electrophilic selenium reagents. Conversion into 2′-deoxynucleosides. Tetrahedron 1997. [DOI: 10.1016/s0040-4020(97)00697-2] [Citation(s) in RCA: 20] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/16/2022]
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15
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Manfredini S, Baraldi PG, Bazzanini R, Simoni D, Balzarini J, De Clercq E. Synthesis and antiproliferative activity of 2′-O-allyl-1-β-D-arabinofuranosyl-uracil, -cytosine and -adenine. Bioorg Med Chem Lett 1997. [DOI: 10.1016/s0960-894x(97)00044-9] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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16
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Jørgensen PN, Wengel J. Stereoselective synthesis of C-branched nucleoside analogues. ACTA ACUST UNITED AC 1996. [DOI: 10.1016/s1572-5995(96)80014-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/09/2023]
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17
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Papchikhin A, Agback P, Plavec J, Chattopadhyaya J. The diastereospecific synthesis of new 2′,3′-Cis-α-fused carbocyclic nucleosides. Tetrahedron 1995. [DOI: 10.1016/0040-4020(94)00950-y] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/27/2022]
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18
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New diastereospecific synthesis of 2′,3′-dideoxy-2′- or 3′-C2-branched- or 2′,3′-α-fused-isoxazolidine nucleosides directly from the seconucleoside. Tetrahedron 1994. [DOI: 10.1016/s0040-4020(01)90437-5] [Citation(s) in RCA: 17] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
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19
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Diastereospecific synthesis of 2′- or 3′-c-branched nucleosides through intramolecular free-radical capture by silicon-tethered acetylene. Tetrahedron 1994. [DOI: 10.1016/s0040-4020(01)90435-1] [Citation(s) in RCA: 21] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
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20
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Garg N, Hossain N, Plavec J, Chattopadhyaya J. New synthesis of 3′--substituted-3′-nitromethyl-ribo-thymidines. Tetrahedron 1994. [DOI: 10.1016/s0040-4020(01)86711-9] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
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21
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The synthesis of new 3′-bis--substituted-3′-deoxy-3′-dehydro-[3.3.0]-α-fused thymidines by intramolecular radical trapping by tethered acetylenes. Tetrahedron 1994. [DOI: 10.1016/s0040-4020(01)90436-3] [Citation(s) in RCA: 13] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
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22
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Xi Z, Glemarec C, Chattopadhyaya J. Synthesis of 2′,3′-cis-fused pyrrolidino-β-D-nucleosides and their conformational analysis by 500 MHz 1H-NMR. Tetrahedron 1993. [DOI: 10.1016/s0040-4020(01)87228-8] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
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23
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Marco-Contelles J, Ruiz P, Martínez L, Martínez-Grau A. Strategies and tactics for free radical carbocyclization: synthesis of polyfunctionalized cyclopentanoid molecules from carbohydrates. Tetrahedron 1993. [DOI: 10.1016/s0040-4020(01)81837-8] [Citation(s) in RCA: 20] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
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25
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Wnuk SF. Sulfur- and seleno-sugar modified nucleosides. Synthesis, chemical transformations and biological properties. Tetrahedron 1993. [DOI: 10.1016/s0040-4020(01)80190-3] [Citation(s) in RCA: 42] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
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Debart F, Vasseur JJ, Sanghvi YS, Dan Cook P. Intermolecular radical CC bond formation: Synthesis of a novel dinucleoside linker for non-anionic antisense oligonucleosides. Tetrahedron Lett 1992. [DOI: 10.1016/s0040-4039(00)79047-2] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
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29
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Xi Z, Agback P, Plavec J, Sandström A, Chattopadhyaya J. New stereocontrolled synthesis of isomeric C-branched-β-D-nucleosides by intramolecular free-radical cyclization- opening reactions based on temporary silicon connection. Tetrahedron 1992. [DOI: 10.1016/s0040-4020(01)88147-3] [Citation(s) in RCA: 32] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/17/2022]
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30
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Synthesis of furo[2,3-c]pyran-β-d-nucleosides by radical-cyclization & their conformational analysis by 500 mhz 1h-nmr spectroscopy. Tetrahedron 1991. [DOI: 10.1016/s0040-4020(01)91032-4] [Citation(s) in RCA: 20] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/19/2022]
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