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Cun WY, Bate CE, Srikhanta YN, Hutton ML, Webb CT, Revitt-Mills SA, Lyras D, McGowan S, Yu H, Keller PA, Pyne SG. Design, Synthesis, and Evaluation of Cephamycin-Based Antisporulation Agents targeting Clostridioides difficile. J Med Chem 2024; 67:450-466. [PMID: 38112278 DOI: 10.1021/acs.jmedchem.3c01662] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2023]
Abstract
With the aim of discovering small molecule inhibitors of the sporulation process in Clostridioides difficile, we prepared a series of C-7 α-(4-substituted-1H-1,2,3-triazol-1-yl)acetamide analogues of cefotetan, a known inhibitor of the C. difficile sporulation-specific protein target CdSpoVD. These analogues were evaluated using both in vitro binding assays with CdSpoVD and antisporulation assays against C. difficile. Further design concepts were aided utilizing the predicted docking scores (DS) using both AlphaFold (AF) models, and a crystal structure of the CdSpoVD protein (PDB 7RCZ). Despite being 1 order of magnitude more potent as a sporulation inhibitor than cefotetan, in vivo studies on compound 6a in a murine-model of C. difficile infection demonstrated comparable spore shedding capabilities as cefotetan. Importantly, compound 6a had no concerning broad spectrum antibacterial activities, toxicity, or hemolytic activity and thus has potential for further drug development.
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Affiliation(s)
- Wendy Y Cun
- School of Chemistry and Molecular Bioscience, Molecular Horizons Research Institute, University of Wollongong, Wollongong 2522 New South Wales, Australia
| | - Clara E Bate
- Infection and Immunity Program, Monash Biomedicine Discovery Institute and Department of Microbiology, Monash University, Clayton 3800, Victoria, Australia
- Centre to Impact AMR, Monash University, Clayton 3800, Victoria Australia
| | - Yogitha N Srikhanta
- Infection and Immunity Program, Monash Biomedicine Discovery Institute and Department of Microbiology, Monash University, Clayton 3800, Victoria, Australia
- Centre to Impact AMR, Monash University, Clayton 3800, Victoria Australia
| | - Melanie L Hutton
- Infection and Immunity Program, Monash Biomedicine Discovery Institute and Department of Microbiology, Monash University, Clayton 3800, Victoria, Australia
- Centre to Impact AMR, Monash University, Clayton 3800, Victoria Australia
| | - Chaille T Webb
- Infection and Immunity Program, Monash Biomedicine Discovery Institute and Department of Microbiology, Monash University, Clayton 3800, Victoria, Australia
- Centre to Impact AMR, Monash University, Clayton 3800, Victoria Australia
| | - Sarah A Revitt-Mills
- Infection and Immunity Program, Monash Biomedicine Discovery Institute and Department of Microbiology, Monash University, Clayton 3800, Victoria, Australia
- Centre to Impact AMR, Monash University, Clayton 3800, Victoria Australia
| | - Dena Lyras
- Infection and Immunity Program, Monash Biomedicine Discovery Institute and Department of Microbiology, Monash University, Clayton 3800, Victoria, Australia
- Centre to Impact AMR, Monash University, Clayton 3800, Victoria Australia
| | - Sheena McGowan
- Infection and Immunity Program, Monash Biomedicine Discovery Institute and Department of Microbiology, Monash University, Clayton 3800, Victoria, Australia
- Centre to Impact AMR, Monash University, Clayton 3800, Victoria Australia
| | - Haibo Yu
- School of Chemistry and Molecular Bioscience, Molecular Horizons Research Institute, University of Wollongong, Wollongong 2522 New South Wales, Australia
- ARC Centre of Excellence in Quantum Biotechnology, University of Wollongong, Wollongong 2522 New South Wales, Australia
| | - Paul A Keller
- School of Chemistry and Molecular Bioscience, Molecular Horizons Research Institute, University of Wollongong, Wollongong 2522 New South Wales, Australia
| | - Stephen G Pyne
- School of Chemistry and Molecular Bioscience, Molecular Horizons Research Institute, University of Wollongong, Wollongong 2522 New South Wales, Australia
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Wojtas KP, Riedrich M, Lu JY, Winter P, Winkler T, Walter S, Arndt HD. Totalsynthese von Nosiheptid. Angew Chem Int Ed Engl 2016. [DOI: 10.1002/ange.201603140] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Affiliation(s)
- K. Philip Wojtas
- Friedrich-Schiller-Universität; Institut für Organische Chemie und Makromolekulare Chemie; Humboldtstraße 10 07743 Jena Deutschland
| | - Matthias Riedrich
- Friedrich-Schiller-Universität; Institut für Organische Chemie und Makromolekulare Chemie; Humboldtstraße 10 07743 Jena Deutschland
| | - Jin-Yong Lu
- Friedrich-Schiller-Universität; Institut für Organische Chemie und Makromolekulare Chemie; Humboldtstraße 10 07743 Jena Deutschland
| | - Philipp Winter
- Friedrich-Schiller-Universität; Institut für Organische Chemie und Makromolekulare Chemie; Humboldtstraße 10 07743 Jena Deutschland
| | - Thomas Winkler
- Friedrich-Schiller-Universität; Institut für Organische Chemie und Makromolekulare Chemie; Humboldtstraße 10 07743 Jena Deutschland
| | - Sophia Walter
- Friedrich-Schiller-Universität; Institut für Organische Chemie und Makromolekulare Chemie; Humboldtstraße 10 07743 Jena Deutschland
| | - Hans-Dieter Arndt
- Friedrich-Schiller-Universität; Institut für Organische Chemie und Makromolekulare Chemie; Humboldtstraße 10 07743 Jena Deutschland
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Wojtas KP, Riedrich M, Lu JY, Winter P, Winkler T, Walter S, Arndt HD. Total Synthesis of Nosiheptide. Angew Chem Int Ed Engl 2016; 55:9772-6. [DOI: 10.1002/anie.201603140] [Citation(s) in RCA: 37] [Impact Index Per Article: 4.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/30/2016] [Indexed: 11/08/2022]
Affiliation(s)
- K. Philip Wojtas
- Friedrich-Schiller-Universität; Institut für Organische Chemie und Makromolekulare Chemie; Humboldtstrasse 10 07743 Jena Germany
| | - Matthias Riedrich
- Friedrich-Schiller-Universität; Institut für Organische Chemie und Makromolekulare Chemie; Humboldtstrasse 10 07743 Jena Germany
| | - Jin-Yong Lu
- Friedrich-Schiller-Universität; Institut für Organische Chemie und Makromolekulare Chemie; Humboldtstrasse 10 07743 Jena Germany
| | - Philipp Winter
- Friedrich-Schiller-Universität; Institut für Organische Chemie und Makromolekulare Chemie; Humboldtstrasse 10 07743 Jena Germany
| | - Thomas Winkler
- Friedrich-Schiller-Universität; Institut für Organische Chemie und Makromolekulare Chemie; Humboldtstrasse 10 07743 Jena Germany
| | - Sophia Walter
- Friedrich-Schiller-Universität; Institut für Organische Chemie und Makromolekulare Chemie; Humboldtstrasse 10 07743 Jena Germany
| | - Hans-Dieter Arndt
- Friedrich-Schiller-Universität; Institut für Organische Chemie und Makromolekulare Chemie; Humboldtstrasse 10 07743 Jena Germany
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