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Pooranachithra M, Jyo EM, Ernst AM, Chisholm AD. C. elegans epicuticlins define specific compartments in the apical extracellular matrix and function in wound repair. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2024:2024.01.12.575393. [PMID: 38260454 PMCID: PMC10802564 DOI: 10.1101/2024.01.12.575393] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/24/2024]
Abstract
The apical extracellular matrix (aECM) of external epithelia often contains lipid-rich outer layers that contribute to permeability barrier function. The external aECM of nematode is known as the cuticle and contains an external lipid-rich layer, the epicuticle. Epicuticlins are a family of tandem repeat proteins originally identified as components of the insoluble fraction of the cuticular aECM and thought to localize in or near epicuticle. However, there has been little in vivo analysis of epicuticlins. Here, we report the localization analysis of the three C. elegans epicuticlins (EPIC proteins) using fluorescent protein knock-ins to visualize endogenously expressed proteins, and further examine their in vivo function using genetic null mutants. By TIRF microscopy, we find that EPIC-1 and EPIC-2 localize to the surface of the cuticle in larval and adult stages in close proximity to the outer lipid layer. EPIC-1 and EPIC-2 also localize to interfacial cuticles and adult-specific cuticle struts. EPIC-3 expression is restricted to the stress-induced dauer stage, where it localizes to interfacial aECM in the buccal cavity. Strikingly, skin wounding in the adult induces epic-3 expression, and EPIC-3::mNG localizes to wound scars. Null mutants lacking one, two, or all three EPIC proteins display reduced survival after skin wounding yet are viable with low penetrance defects in epidermal morphogenesis. Our results suggest EPIC proteins define specific aECM compartments and have roles in wound repair.
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Affiliation(s)
- Murugesan Pooranachithra
- Department of Cell and Developmental Biology, School of Biological Sciences, University of California San Diego, La Jolla, CA 92093
| | - Erin M Jyo
- Department of Cell and Developmental Biology, School of Biological Sciences, University of California San Diego, La Jolla, CA 92093
| | - Andreas M Ernst
- Department of Cell and Developmental Biology, School of Biological Sciences, University of California San Diego, La Jolla, CA 92093
| | - Andrew D Chisholm
- Department of Cell and Developmental Biology, School of Biological Sciences, University of California San Diego, La Jolla, CA 92093
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Ultrastructural analysis of the dehydrated tardigrade Hypsibius exemplaris unveils an anhydrobiotic-specific architecture. Sci Rep 2020; 10:4324. [PMID: 32152342 PMCID: PMC7062702 DOI: 10.1038/s41598-020-61165-1] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/13/2019] [Accepted: 02/18/2020] [Indexed: 01/06/2023] Open
Abstract
Tardigrades can cope with adverse environmental conditions by turning into anhydrobiotes with a characteristic tun shape. Tun formation is an essential morphological adaptation for tardigrade entry into the anhydrobiotic state. The tun cell structure and ultrastructure have rarely been explored in tardigrades in general and never in Hypsibius exemplaris. We used transmission electron microscopy to compare cellular organization and ultrastructures between hydrated and anhydrobiotic H. exemplaris. Despite a globally similar cell organelle structure and a number of cells not significantly different between hydrated and desiccated tardigrades, reductions in the sizes of both cells and mitochondria were detected in dehydrated animals. Moreover, in anhydrobiotes, secretory active cells with a dense endoplasmic reticulum network were observed. Interestingly, these anhydrobiote-specific cells are in a close relationship with a specific extracellular structure surrounding each cell. It is possible that this rampart-like extracellular structure resulted from the accumulation of anhydrobiotic-specific material to protect the cells. Interestingly, after five hours of rehydration, the number of secretory cells decreased, and the specific extracellular structure began to disappear. Twenty-four hours after the beginning of rehydration, the cellular structure and ultrastructure were comparable to those observed in hydrated tardigrades.
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Czerneková M, Jönsson KI, Chajec L, Student S, Poprawa I. The structure of the desiccated Richtersius coronifer (Richters, 1903). PROTOPLASMA 2017; 254:1367-1377. [PMID: 27677802 DOI: 10.1007/s00709-016-1027-2] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/26/2016] [Accepted: 09/12/2016] [Indexed: 06/06/2023]
Abstract
Tun formation is an essential morphological adaptation for entering the anhydrobiotic state in tardigrades, but its internal structure has rarely been investigated. We present the structure and ultrastructure of organs and cells in desiccated Richtersius coronifer by transmission and scanning electron microscopy, confocal microscopy, and histochemical methods. A 3D reconstruction of the body organization of the tun stage is also presented. The tun formation during anhydrobiosis of tardigrades is a process of anterior-posterior body contraction, which relocates some organs such as the pharyngeal bulb. The cuticle is composed of epicuticle, intracuticle and procuticle; flocculent coat; and trilaminate layer. Moulting does not seem to restrict the tun formation, as evidenced from tardigrade tuns that were in the process of moulting. The storage cells of desiccated specimens filled up the free inner space and surrounded internal organs, such as the ovary and digestive system, which were contracted. All cells (epidermal cells, storage cells, ovary cells, cells of the digestive system) underwent shrinkage, and their cytoplasm was electron dense. Lipids and polysaccharides dominated among reserve material of storage cells, while the amount of protein was small. The basic morphology of specific cell types and organelles did not differ between active and anhydrobiotic R. coronifer.
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Affiliation(s)
- Michaela Czerneková
- School of Education and Environment, Kristianstad University, Kristianstad, Sweden.
- Institute of Physiology, Academy of Sciences of the Czech Republic, Prague, Czech Republic.
- Faculty of Medicine, Charles University, Prague, Czech Republic.
| | - K Ingemar Jönsson
- School of Education and Environment, Kristianstad University, Kristianstad, Sweden
| | - Lukasz Chajec
- Department of Animal Histology and Embryology, Silesian University, Katowice, Poland
| | - Sebastian Student
- Institute of Automatic Control, Silesian University of Technology, Gliwice, Poland
| | - Izabela Poprawa
- Department of Animal Histology and Embryology, Silesian University, Katowice, Poland
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Guidetti R, Altiero T, Rebecchi L. On dormancy strategies in tardigrades. JOURNAL OF INSECT PHYSIOLOGY 2011; 57:567-76. [PMID: 21402076 DOI: 10.1016/j.jinsphys.2011.03.003] [Citation(s) in RCA: 82] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/29/2010] [Revised: 03/02/2011] [Accepted: 03/03/2011] [Indexed: 05/19/2023]
Abstract
In this review we analyze the dormancy strategies of metazoans inhabiting "hostile to life" habitats, which have a strong impact on their ecology and in particular on the traits of their life history. Tardigrades are here considered a model animal, being aquatic organisms colonizing terrestrial habitats. Tardigrades evolved a large variety of dormant stages that can be ascribed to diapause (encystment, cyclomorphosis, resting eggs) and cryptobiosis (anhydrobiosis, cryobiosis, anoxibiosis). In tardigrades, diapause and cryptobiosis can occur separately or simultaneously, consequently the adoption of one adaptive strategy is not necessarily an alternative to the adoption of the other. Encystment and cyclomorphosis are characterized by seasonal cyclic changes in morphology and physiology of the animals. They share several common features and their evolution is strictly linked to the molting process. A bet-hedging strategy with different patterns of egg hatching time has been observed in a tardigrade species. Four categories of eggs have been identified: subitaneous, delayed-hatching, abortive and diapause resting eggs, which needs a stimulus to hatch (rehydration after a period of desiccation). Cryptobiotic tardigrades are able to withstand desiccation (anhydrobiosis) and freezing (cryobiosis) at any stage of their life-cycle. This ability involves a complex array of factors working at molecular (bioprotectans), physiological and structural levels. Animal survival and the accumulation of molecular damage are related to the time spent in the cryptobiotic state, to the abiotic parameters during the cryptobiotic state, and to the conditions during initial and final phases of the process. Cryptobiosis evolved independently at least two times in tardigrades, in eutardigrades and in echiniscoids. Within each evolutionary line, the absence of cryptobiotic abilities is more related to selective pressures to local habitat adaptation than to phylogenetic relationships. The selective advantages of cryptobiosis (e.g. persistency in "hostile to life" habitats, reduction of competitors, parasites and predators, escaping in time from stressful conditions) could explain the high tardigrade species diversity and number of specimens found in habitats that dry out compared to freshwater habitats.
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Affiliation(s)
- Roberto Guidetti
- Department of Biology, University of Modena and Reggio Emilia, via Campi 213/D, 41125 Modena, Italy.
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Abstract
SUMMARYThe ability of certain species of parasitic nematodes to survive desiccation for considerable periods is a fascinating example of adaptation to the demands of fluctuating environments that occasionally can become extreme and life threatening. Behavioural and morphological adaptations associated with desiccation survival serve primarily to reduce the rate of drying, either to prolong the time taken for the nematode's water content to reach lethal low levels or, in true anhydrobiotes, to enable the structural and biochemical changes required for long-term survival to take place. Examples of these adaptations are reviewed, together with information on the factors involved in rehydration that ensure successful exit from the dormant state. Information on desiccation survival is central to effective management and control options for parasitic nematodes. It is also required to assess the feasibility of enhancing the longevity of commercial formulations of entomopathogenic nematodes, both before and after application; current research and future prospects for enhancing survival of these bio-insecticides are discussed.
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Moens M, Perry RN. Migratory plant endoparasitic nematodes: a group rich in contrasts and divergence. ANNUAL REVIEW OF PHYTOPATHOLOGY 2009; 47:313-32. [PMID: 19400647 DOI: 10.1146/annurev-phyto-080508-081846] [Citation(s) in RCA: 24] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/02/2023]
Abstract
Species of migratory plant endoparasitic nematodes of three nematode families, Pratylenchidae, Anguinidae, and Aphelenchoididae, show marked variation in life cycles and fascinating contrasts in host-parasite interactions. The necessity for survival for periods in the absence of a host has resulted in some remarkable behavioral and physiological adaptations, especially in relation to anhydrobiotic survival. Many species are of major economic importance, and interactions with other pathogens enhance crop damage and yield loss. No single management strategy for endoparasitic nematodes is possible because control options have to be tailored to the nematode species, crop type, location, and economic returns. In this review, we focus on the contrast in life cycles and the wide spectrum of adaptations to obligate parasitism of most species of plant endoparasitic nematodes and examine how these aspects impinge on management options.
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Affiliation(s)
- Maurice Moens
- Institute for Agricultural and Fisheries Research, Belgium and Laboratory for Agrozoology, Ghent University, 9000 Ghent, Belgium.
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Ricci C, Caprioli M, Fontaneto D, Melone G. Volume and morphology changes of a bdelloid rotifer species (Macrotrachela quadricornifera) during anhydrobiosis. J Morphol 2008; 269:233-9. [PMID: 17957710 DOI: 10.1002/jmor.10579] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
Abstract
Following a study on the changes occurring in a bdelloid species (Macrotrachela quadricornifera, Rotifera, Bdelloidea) when entering anhydrobiosis, we investigated the changes in morphology, including weight and volume during the transition from the active hydrated to the dormant anhydrobiotic state by scanning electron microscopy, confocal microscopy and light microscopy. We compared sizes and morphologies of hydrated extended, hydrated contracted and anhydrobiotic specimens. Bdelloid musculature is defined: longitudinal muscles are contracted in the hydrated contracted animal (head and foot are retracted inside the trunk), but appear loose in the anhydrobiotic animal. When anhydrobiotic, M. quadricornifera appears much smaller in size, with a volume reduction of about 60% of the hydrated volume, and its internal organization undergoes remarkable modifications. Internal body cavities, clearly distinguishable in the hydrated extended and contracted specimens, are no longer visible in the anhydrobiotic specimen. Concomitantly, M. quadricornifera loses more than 95% of its weight when anhydrobiotic; this is more than expected from the volume reduction data and could indicate the presence of space-filling molecular species in the dehydrated animal. We estimate that the majority of body mass loss and volume reduction can be ascribed to the water loss from the body cavity during desiccation.
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Affiliation(s)
- Claudia Ricci
- Department of Biology, State University of Milan, 20133 Milan, Italy.
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Salinas-Flores L, Adams SL, Wharton DA, Downes MF, Lim MH. Survival of Pacific oyster, Crassostrea gigas, oocytes in relation to intracellular ice formation. Cryobiology 2007; 56:28-35. [PMID: 18045585 DOI: 10.1016/j.cryobiol.2007.10.172] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/18/2007] [Revised: 10/09/2007] [Accepted: 10/12/2007] [Indexed: 11/29/2022]
Abstract
The effect of IIF in Pacific oyster oocytes was studied using cryo and transmission electron microscopy (TEM). The viability of oocytes at each step of a published cryopreservation protocol was assessed in an initial experiment. Two major viability losses were identified; one when oocytes were cooled to -35 degrees C and the other when oocytes were plunged in liquid nitrogen. Although the cryomicroscope showed no evidence of IIF in oocytes cooled with this protocol, TEM revealed that these oocytes contained ice crystals and were at two developmental stages when frozen, prophase and metaphase I. To reduce IIF, the effect of seven cooling programmes involving cooling to -35 or -60 degrees C at 0.1 or 0.3 degrees C min(-1) and holding for 0 or 30 min at -35 or -60 degrees C was evaluated on post-thaw fertilization rate of oocytes. Regardless of the cooling rate or holding time, the fertilization rate of oocytes cooled to -60 degrees C was significantly lower than that of oocytes cooled to -35 degrees C. The overall results indicated that observations of IIF obtained from cryomicroscopy are limited to detection of larger amounts of ice within the cells. Although the amount of cellular ice may have been reduced by one of the programmes, fertilization was reduced significantly; suggesting that there is no correlation between the presence of intracellular ice and post-thaw fertilization rate. Therefore, oyster oocytes may be more susceptible to the effect of high solute concentrations and cell shrinkage than intracellular ice under the studied conditions.
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Ricci C, Melone G, Santo N, Caprioli M. Morphological response of a bdelloid rotifer to desiccation. J Morphol 2003; 257:246-53. [PMID: 12833383 DOI: 10.1002/jmor.10120] [Citation(s) in RCA: 46] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
Abstract
We desiccated bdelloid rotifers (Macrotrachela quadricornifera), submitting the animals to four desiccation procedures (protocols A, B, C, D) that differed in the rate of water evaporation, in the time of desiccation, and in the substrates provided. We observed external morphological changes of the rotifer bodies during drying with scanning electron microscopy and, in parallel, assessed rates of recovery after a 7-day period of dormancy. Two protocols produced disorganized morphologies of the anhydrobiotic animals, with no (A) or very poor (B) recovery. Protocols C and D gave rather high rates of recovery and dry rotifers appeared unaltered and well organized. The different protocols affected rotifer morphology during the 7-day anhydrobiosis and rates of recovery after the 7-day anhydrobiosis; high recovery rates corresponded to well-organized morphologies of anhydrobiotic bdelloids, suggesting that a proper contraction of the body into a tun shape and probably a rigorous packing of internal structures are necessary for survival after anhydrobiosis. These features are affected by the time between water shortage and full desiccation, but also by the surrounding relative humidity and by the nature of the substrate. Possible adaptations of anhydrobiotic rotifers are discussed.
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Affiliation(s)
- Claudia Ricci
- Department of Biology, State University of Milan, 20133 Milano, Italy.
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Wharton DA, Marshall AT. Changes in surface features during desiccation of the anhydrobiotic plant parasitic nematode Ditylenchus dipsaci. Tissue Cell 2002; 34:81-7. [PMID: 12165242 DOI: 10.1016/s0040-8166(02)00011-3] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
Abstract
The anhydrobiotic nematode Ditylenchus dipsaci is a fast-dehydration strategist, itself generating the slow rate of water loss necessary for survival. A permeability slump occurs during the initial phases of desiccation. This may be produced by changes in the nematode's cuticle. Two scanning electron microscopic techniques were used to follow changes in surface structures during desiccation. Freeze substitution and critical-point drying produced artifacts that obscured changes produced by the desiccation of the nematode. Low-temperature field emission scanning electron microscopy (FESEM) was successful in following changes that reflected those observed by light microscopy (LM). Significant changes in diameter, the lateral alae, and the cuticular annulations were demonstrated using this technique. Two types of annulations were observed: the major annulations, which extended to meet the margins of the lateral alae, and the minor annulations, which did not. With desiccation the prominence of the annulations increased, their spacing decreased, and the minor annulations extended closer to the margins of the lateral alae. These observations are consistent with the permeability slump resulting from a decrease in the width of the annulation groove and an increase in its depth. However, this requires confirmation using techniques that can follow annulation changes in individual nematodes.
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Affiliation(s)
- David A Wharton
- Department of Zoology, University of Otago, PO Box 56, Dunedin, New Zealand.
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