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Ishii H, Shirai T, Makino C, Nishikata T. Mitochondrial inhibitor sodium azide inhibits the reorganization of mitochondria-rich cytoplasm and the establishment of the anteroposterior axis in ascidian embryo. Dev Growth Differ 2014; 56:175-88. [DOI: 10.1111/dgd.12117] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/14/2013] [Revised: 12/04/2013] [Accepted: 12/04/2013] [Indexed: 11/30/2022]
Affiliation(s)
- Hirokazu Ishii
- Frontiers of Innovative Research in Science and Technology (FIRST); Konan University; Kobe Hyogo 650-0047 Japan
| | - Takuma Shirai
- Frontiers of Innovative Research in Science and Technology (FIRST); Konan University; Kobe Hyogo 650-0047 Japan
| | - Chisato Makino
- Frontiers of Innovative Research in Science and Technology (FIRST); Konan University; Kobe Hyogo 650-0047 Japan
| | - Takahito Nishikata
- Frontiers of Innovative Research in Science and Technology (FIRST); Konan University; Kobe Hyogo 650-0047 Japan
- Frontier Institute for Biomolecular Engineering Research (FIBER); Konan University; Kobe Hyogo 650-0047 Japan
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Chenevert J, Pruliere G, Ishii H, Sardet C, Nishikata T. Purification of mitochondrial proteins HSP60 and ATP synthase from ascidian eggs: implications for antibody specificity. PLoS One 2013; 8:e52996. [PMID: 23326373 PMCID: PMC3542361 DOI: 10.1371/journal.pone.0052996] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/26/2012] [Accepted: 11/20/2012] [Indexed: 01/25/2023] Open
Abstract
Use of antibodies is a cornerstone of biological studies and it is important to identify the recognized protein with certainty. Generally an antibody is considered specific if it labels a single band of the expected size in the tissue of interest, or has a strong affinity for the antigen produced in a heterologous system. The identity of the antibody target protein is rarely confirmed by purification and sequencing, however in many cases this may be necessary. In this study we sought to characterize the myoplasm, a mitochondria-rich domain present in eggs and segregated into tadpole muscle cells of ascidians (urochordates). The targeted proteins of two antibodies that label the myoplasm were purified using both classic immunoaffinity methods and a novel protein purification scheme based on sequential ion exchange chromatography followed by two-dimensional gel electrophoresis. Surprisingly, mass spectrometry sequencing revealed that in both cases the proteins recognized are unrelated to the original antigens. NN18, a monoclonal antibody which was raised against porcine spinal cord and recognizes the NF-M neurofilament subunit in vertebrates, in fact labels mitochondrial ATP synthase in the ascidian embryo. PMF-C13, an antibody we raised to and purified against PmMRF, which is the MyoD homolog of the ascidian Phallusia mammillata, in fact recognizes mitochondrial HSP60. High resolution immunolabeling on whole embryos and isolated cortices demonstrates localization to the inner mitochondrial membrane for both ATP synthase and HSP60. We discuss the general implications of our results for antibody specificity and the verification methods which can be used to determine unequivocally an antibody's target.
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Affiliation(s)
- Janet Chenevert
- Université Pierre et Marie Curie and CNRS, Developmental Biology Unit UMR7009, Villefranche-sur-mer, France.
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Makabe KW, Nishida H. Cytoplasmic localization and reorganization in ascidian eggs: role of postplasmic/PEM RNAs in axis formation and fate determination. WILEY INTERDISCIPLINARY REVIEWS-DEVELOPMENTAL BIOLOGY 2012; 1:501-18. [PMID: 23801532 DOI: 10.1002/wdev.54] [Citation(s) in RCA: 21] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Abstract
Localization of maternal molecules in eggs and embryos and cytoplasmic movements to relocalize them are fundamental for the orderly cellular and genetic processes during early embryogenesis. Ascidian embryos have been known as 'mosaic eggs' because of their autonomous differentiation abilities based on localized cell fate determinants. This review gives a historical overview of the concept of cytoplasmic localization, and then explains the key features such as ooplasmic movements and cell lineages that are essential to grasp the process of ascidian development mediated by localized determinant activities. These activities are partly executed by localized molecules named postplasmic/PEM RNAs, originating from approximately 50 genes, of which the muscle determinant, macho-1, is an example. The cortical domain containing these RNAs is relocalized to the posterior-vegetal region of the egg by cytoskeletal movements after fertilization, and plays crucial roles in axis formation and cell fate determination. The cortical domain contains endoplasmic reticulum and characteristic granules, and gives rise to a subcellular structure called the centrosome-attracting body (CAB), in which postplasmic/PEM RNAs are highly concentrated. The CAB is responsible for a series of unequal partitionings of the posterior-vegetal cytoplasmic domain and the postplasmic/PEM RNAs at the posterior pole during cleavage. Some components of this domain, which is rich in granules, are eventually inherited by prospective germline cells with particular postplasmic/PEM RNAs such as vasa. The postplasmic/PEM RNAs are classified into two groups according to their final cellular destinations and localization pathways. Localization of these RNAs is regulated by specific nucleotide sequences in the 3' untranslated regions (3'UTRs).
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Affiliation(s)
- Kazuhiro W Makabe
- Institute of Socio-Arts and Sciences, University of Tokushima, Tokushima, Japan
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Sardet C, Paix A, Prodon F, Dru P, Chenevert J. From oocyte to 16-cell stage: Cytoplasmic and cortical reorganizations that pattern the ascidian embryo. Dev Dyn 2007; 236:1716-31. [PMID: 17420986 DOI: 10.1002/dvdy.21136] [Citation(s) in RCA: 65] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/06/2023] Open
Abstract
The dorsoventral and anteroposterior axes of the ascidian embryo are defined before first cleavage by means of a series of reorganizations that reposition cytoplasmic and cortical domains established during oogenesis. These domains situated in the periphery of the oocyte contain developmental determinants and a population of maternal postplasmic/PEM RNAs. One of these RNAs (macho-1) is a determinant for the muscle cells of the tadpole embryo. Oocytes acquire a primary animal-vegetal (a-v) axis during meiotic maturation, when a subcortical mitochondria-rich domain (myoplasm) and a domain rich in cortical endoplasmic reticulum (cER) and maternal postplasmic/PEM RNAs (cER-mRNA domain) become polarized and asymmetrically enriched in the vegetal hemisphere. Fertilization at metaphase of meiosis I initiates a series of dramatic cytoplasmic and cortical reorganizations of the zygote, which occur in two major phases. The first major phase depends on sperm entry which triggers a calcium wave leading in turn to an actomyosin-driven contraction wave. The contraction concentrates the cER-mRNA domain and myoplasm in and around a vegetal/contraction pole. The precise localization of the vegetal/contraction pole depends on both the a-v axis and the location of sperm entry and prefigures the future site of gastrulation and dorsal side of the embryo. The second major phase of reorganization occurs between meiosis completion and first cleavage. Sperm aster microtubules and then cortical microfilaments cause the cER-mRNA domain and myoplasm to reposition toward the posterior of the zygote. The location of the posterior pole depends on the localization of the sperm centrosome/aster attained during the first major phase of reorganization. Both cER-mRNA and myoplasm domains localized in the posterior region are partitioned equally between the first two blastomeres and then asymmetrically over the next two cleavages. At the eight-cell stage the cER-mRNA domain compacts and gives rise to a macroscopic cortical structure called the Centrosome Attracting Body (CAB). The CAB is responsible for a series of unequal divisions in posterior-vegetal blastomeres, and the postplasmic/PEM RNAs it contains are involved in patterning the posterior region of the embryo. In this review, we discuss these multiple events and phases of reorganizations in detail and their relationship to physiological, cell cycle, and cytoskeletal events. We also examine the role of the reorganizations in localizing determinants, postplasmic/PEM RNAs, and PAR polarity proteins in the cortex. Finally, we summarize some of the remaining questions concerning polarization of the ascidian embryo and provide comparisons to a few other species. A large collection of films illustrating the reorganizations can be consulted by clicking on "Film archive: ascidian eggs and embryos" at http://biodev.obs-vlfr.fr/recherche/biomarcell/.
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Affiliation(s)
- Christian Sardet
- BioMarCell group, UMR 7009 Biodev CNRS/ Université Pierre et Marie Curie (Paris VI), Observatoire Océanologique, Villefranche-sur-Mer, France.
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Sardet C, Dru P, Prodon F. Maternal determinants and mRNAs in the cortex of ascidian oocytes, zygotes and embryos. Biol Cell 2005; 97:35-49. [PMID: 15601256 DOI: 10.1042/bc20040126] [Citation(s) in RCA: 56] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/12/2023]
Abstract
The peripheral region of ascidian oocytes and zygotes contains five determinants for morphogenesis and differentiation of the embryo. The determinant for the 24 primary muscle cells of the tadpole, macho1, is one of several cortical mRNAs localized in a gradient along the animal-vegetal axis in the oocyte. After fertilization these mRNAs, together with cortical endoplasmic reticulum (cER) and a subcortical mitochondria-rich domain (myoplasm), relocate in two major reorganization phases forming the posterior plasm (postplasm) of the zygote. At the 8-cell stage cortical mRNAs concentrate in a macroscopic cortical structure called the centrosome-attracting body (CAB), forming a characteristic posterior end mark (PEM) in the two posterior vegetal blastomeres. We propose to call the numerous mRNAs showing this particular cortical localization in the posterior region of the embryo postplasmic/PEM RNAs and suggest a nomemclature. We do not know how postplasmic/PEM RNAs reach their polarized distribution in the oocyte cortex but at least PEM1 and macho1 (and probably others) bind to the network of cER retained in isolated cortical fragments. We propose that after fertilization, these postplasmic/PEM mRNAs move in the zygote cortex together with the cER network (cER/mRNA domain) via microfilament- and microtubule-driven translocations. The cER/mRNA domain is localized posteriorly at the time of first cleavage and distributed equally between the first two blastomeres. After the third cleavage, the cER/mRNA domain and dense particles compact to form the CAB in posterior vegetal blastomeres of the 8-cell stage. We discuss the identity of postplasmic/PEM RNAs, how they localize, anchor, relocate and may be translated. We also examine their roles in unequal cleavage and as a source of posterior morphogenetic and differentiation factors.
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Affiliation(s)
- Christian Sardet
- BioMarCell, UMR 7009, CNRS/UPMC, Station Zoologique, Observatoire, Villefranche sur Mer, 06230, France.
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Sardet C, Prodon F, Dumollard R, Chang P, Chênevert J. Structure and function of the egg cortex from oogenesis through fertilization. Dev Biol 2002; 241:1-23. [PMID: 11784091 DOI: 10.1006/dbio.2001.0474] [Citation(s) in RCA: 86] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/27/2022]
Affiliation(s)
- Christian Sardet
- BioMarCell, UMR 7009 Biologie du Developpement, Villefranche sur Mer, 06230, France.
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Jeffery WR. Determinants of cell and positional fate in ascidian embryos. INTERNATIONAL REVIEW OF CYTOLOGY 2001; 203:3-62. [PMID: 11131520 DOI: 10.1016/s0074-7696(01)03003-0] [Citation(s) in RCA: 41] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
Abstract
Ascidians have played a major role in studies to understand the function of cytoplasmic determinants in animal development. Special qualities, including eggs with colored cytoplasmic regions, an invariant cleavage pattern and cell lineage, embryos with low cell numbers, larvae with typical chordate features and only six different tissues, rapid development, and a small genome, combine to make these animals a unique system for studying cytoplasmic determinants. There is evidence for determinants that specify the cleavage pattern; the differentiation of epidermal, endodermal, and muscle cells; and cell movements associated with gastrulation. The muscle determinants appear to be modified in concert with tail and muscle regression in species that have evolved an anural, or tailless, larva. Several lines of evidence suggest that determinants may be localized maternal mRNAs, which encode transcription factors or signal transduction components responsible for initiating differential gene activity. Different approaches and strategies are being used to isolate and characterize the function of these localized maternal mRNAs.
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Affiliation(s)
- W R Jeffery
- Department of Biology, University of Maryland, College Park 20742, USA
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Abstract
This survey focuses on early or primitive developmental phenomena for which the location of a steady high calcium region or the direction of a calcium wave is critical and calcium is more than a trigger. It starts with the long studied roles of calcium in fucoid eggs and in Dictyostelium and progresses to newer work on high calcium regions in medaka fish, zebrafish, and Drosophila eggs. It then proposes that propagated, ultraslow developmental waves in six diverse systems indicate a new and important class of calcium waves. These include the morphogenetic furrow in Drosophila eye discs, floret formation in sunflowers, DNA replication waves in protozoan macronuclei, growth-cone like waves in hippocampal neurons, and two others. It then considers the possible organizing roles of slow calcium waves. Here, it emphasizes surface contractile waves during primary neural induction and elsewhere as well as the possibility of cellular peristalsis. Finally, it reviews the organizing roles of fast calcium waves in ascidian eggs.
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Affiliation(s)
- L F Jaffe
- Dept. OB/GYN, Women & Infants Hospital, Brown University, 101 Dudley Street, Providence, Rhode Island 01905, USA.
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Roegiers F, Djediat C, Dumollard R, Rouvière C, Sardet C. Phases of cytoplasmic and cortical reorganizations of the ascidian zygote between fertilization and first division. Development 1999; 126:3101-17. [PMID: 10375502 DOI: 10.1242/dev.126.14.3101] [Citation(s) in RCA: 58] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
Abstract
Many eggs undergo reorganizations that localize determinants specifying the developmental axes and the differentiation of various cell types. In ascidians, fertilization triggers spectacular reorganizations that result in the formation and localization of distinct cytoplasmic domains that are inherited by early blastomeres that develop autonomously. By applying various imaging techniques to the transparent eggs of Phallusia mammillata, we now define 9 events and phases in the reorganization of the surface, cortex and the cytoplasm between fertilization and first cleavage. We show that two of the domains that preexist in the egg (the ER-rich cortical domain and the mitochondria-rich subcortical myoplasm) are localized successively by a microfilament-driven cortical contraction, a microtubule-driven migration and rotation of the sperm aster with respect to the cortex, and finally, a novel microfilament-dependant relaxation of the vegetal cortex. The phases of reorganization we have observed can best be explained in terms of cell cycle-regulated phases of coupling, uncoupling and recoupling of the motions of cortical and subcortical layers (ER-rich cortical domain and mitochondria-rich domain) with respect to the surface of the zygote. At the end of the meiotic cell cycle we can distinguish up to 5 cortical and cytoplasmic domains (including two novel ones; the vegetal body and a yolk-rich domain) layered against the vegetal cortex. We have also analyzed how the myoplasm is partitioned into distinct blastomeres at the 32-cell stage and the effects on development of the ablation of precisely located small fragments. On the basis of our observations and of the ablation/ transplantation experiments done in the zygotes of Phallusia and several other ascidians, we suggest that the determinants for unequal cleavage, gastrulation and for the differentiation of muscle and endoderm cells may reside in 4 distinct cortical and cytoplasmic domains localized in the egg between fertilization and cleavage.
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Affiliation(s)
- F Roegiers
- Bio Mar Cell, Unité de Biologie du Développement - UMR 643, CNRS/UPMC, Station Zoologique, Villefranche-sur-mer, France.
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Nishida H. Cell fate specification by localized cytoplasmic determinants and cell interactions in ascidian embryos. INTERNATIONAL REVIEW OF CYTOLOGY 1997; 176:245-306. [PMID: 9394921 DOI: 10.1016/s0074-7696(08)61612-5] [Citation(s) in RCA: 71] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/05/2023]
Abstract
Tadpole larvae of ascidians show the basic body plan of chordates. An ascidian larva consists of only a few types of cells and has a relatively small number of cells. Cell lineages are invariant among individuals and have been described in detail. These advantages facilitate the analysis of how the fate of each blastomere becomes specified during development. Over a century of research on ascidian embryogenesis has uncovered many interesting features concerning cellular mechanisms responsible for the fate specification. During embryogenesis, the developmental fate of a blastomere is specified by one of three different mechanisms: localized maternal cytoplasmic determinants, inductive interactions, or lateral inhibition in an equivalence cell group.
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Affiliation(s)
- H Nishida
- Department of Life Science, Tokyo Institute of Technology, Yokohama, Japan
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