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Wang J, Marks JH, Turner AM, Mebel AM, Eckhardt AK, Kaiser RI. Gas-phase detection of oxirene. SCIENCE ADVANCES 2023; 9:eadg1134. [PMID: 36897943 PMCID: PMC10005165 DOI: 10.1126/sciadv.adg1134] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 12/02/2022] [Accepted: 02/08/2023] [Indexed: 06/18/2023]
Abstract
Oxirenes-highly strained 4π Hückel antiaromatic organics-have been recognized as key reactive intermediates in the Wolff rearrangement and in interstellar environments. Predicting short lifetimes and tendency toward ring opening, oxirenes are one of the most mysterious classes of organic transients, with the isolation of oxirene (c-C2H2O) having remained elusive. Here, we report on the preparation of oxirene in low-temperature methanol-acetaldehyde matrices upon energetic processing through isomerization of ketene (H2CCO) followed by resonant energy transfer of the internal energy of oxirene to the vibrational modes (hydroxyl stretching and bending, methyl deformation) of methanol. Oxirene was detected upon sublimation in the gas phase exploiting soft photoionization coupled with a reflectron time-of-flight mass spectrometry. These findings advance our fundamental understanding of the chemical bonding and stability of cyclic, strained molecules and afford a versatile strategy for the synthesis of highly ring-strained transients in extreme environments.
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Affiliation(s)
- Jia Wang
- W. M. Keck Research Laboratory in Astrochemistry, University of Hawaii at Manoa, Honolulu, HI 96822, USA
- Department of Chemistry, University of Hawaii at Manoa, Honolulu, HI 96822, USA
| | - Joshua H. Marks
- W. M. Keck Research Laboratory in Astrochemistry, University of Hawaii at Manoa, Honolulu, HI 96822, USA
- Department of Chemistry, University of Hawaii at Manoa, Honolulu, HI 96822, USA
| | - Andrew M. Turner
- W. M. Keck Research Laboratory in Astrochemistry, University of Hawaii at Manoa, Honolulu, HI 96822, USA
- Department of Chemistry, University of Hawaii at Manoa, Honolulu, HI 96822, USA
| | - Alexander M. Mebel
- Department of Chemistry and Biochemistry, Florida International University, Miami, FL 33199, USA
| | - André K. Eckhardt
- Lehrstuhl für Organische Chemie II, Ruhr-Universität Bochum, Bochum 44801, Germany
| | - Ralf I. Kaiser
- W. M. Keck Research Laboratory in Astrochemistry, University of Hawaii at Manoa, Honolulu, HI 96822, USA
- Department of Chemistry, University of Hawaii at Manoa, Honolulu, HI 96822, USA
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Rey Planells A, Espinosa Ferao A. Accurate Ring Strain Energies of Unsaturated Three-Membered Heterocycles with One Group 13-16 Element. Inorg Chem 2022; 61:6459-6468. [PMID: 35442022 PMCID: PMC9066411 DOI: 10.1021/acs.inorgchem.2c00067] [Citation(s) in RCA: 9] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
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High-quality ring
strain energy (RSE) data for 1H-unsaturated (CH)2X parent rings, where X is a group 13–16
element, are reported in addition to the 2H-isomers
of the pnictogenirene rings. RSE data are obtained from appropriate
homosdesmotic reactions and calculated at the DLPNO-CCSD(T)/def2-TZVPP//B3LYP-D3/def2-TZVP(ecp)
level. 1H-Tallirene and 1H-plumbirene
have unique donor–acceptor structures between an acetylene
π(CC) orbital and an empty p orbital of a metallylene subunit
(a Dewar–Chatt–Duncanson description) and therefore
cannot be described as proper rings but as pseudocyclic structures.
Also, 1H-indirene and 1H-oxirene
lack ring critical points and constitute borderline cases of pseudorings.
1H-Unsaturated rings exhibit enhanced RSE compared
to their saturated homologues. The mechanism of ring strain relaxation
by increasing the s character in the lone pair (LP) of group 15–16
elements is remarkable and increases on descending the groups. Furthermore,
RSE is affected by the aromatic character of group 13 rings and certain
aromatic or antiaromatic character in group 14 or 15–16 rings,
respectively, which tend to vanish on descending the group as shown
by NICS(1) values. 2H-Unsaturated rings were found
only for group 15 elements (although only 2H-azirine
shows a proper cyclic structure) and displayed lower RSE (higher stability)
than the corresponding 1H-isomers. Accurate ring strain energies (RSE) are
calculated for three-membered
1H-unsaturated rings containing a 13−16 group
element and group 15 2H-isomers. The presence or
absence of lone pairs at the heteroatom and the existence of intrinsic
or residual (anti)aromaticity were shown to affect the RSE.
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Affiliation(s)
- Alicia Rey Planells
- Departamento de Química Orgánica, Facultad de Química, Campus de Espinardo, Universidad de Murcia, 30100 Murcia, Spain
| | - Arturo Espinosa Ferao
- Departamento de Química Orgánica, Facultad de Química, Campus de Espinardo, Universidad de Murcia, 30100 Murcia, Spain
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Karton A, Spackman PR. Evaluation of density functional theory for a large and diverse set of organic and inorganic equilibrium structures. J Comput Chem 2021; 42:1590-1601. [DOI: 10.1002/jcc.26698] [Citation(s) in RCA: 19] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/19/2021] [Revised: 05/19/2021] [Accepted: 05/21/2021] [Indexed: 01/08/2023]
Affiliation(s)
- Amir Karton
- School of Molecular Sciences The University of Western Australia Perth Western Australia Australia
| | - Peter R. Spackman
- School of Molecular and Life Sciences Curtin University Perth WA Australia
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Miyazaki T, Watabe Y, Hashimoto Y, Takahashi Y, Sugiura Y, Saito K, Takayanagi T. Theoretical Analysis of the Formylmethylene Anion Photoelectron Spectrum: Importance of Wolff Rearrangement Dynamics. J Phys Chem A 2020; 124:9721-9728. [DOI: 10.1021/acs.jpca.0c09067] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Takaaki Miyazaki
- Department of Chemistry, Saitama University, Shimo-Okubo 255, Saitama City, Saitama 338-8570, Japan
| | - Yuya Watabe
- Department of Chemistry, Saitama University, Shimo-Okubo 255, Saitama City, Saitama 338-8570, Japan
| | - Yu Hashimoto
- Department of Chemistry, Saitama University, Shimo-Okubo 255, Saitama City, Saitama 338-8570, Japan
| | - Yukinobu Takahashi
- Department of Chemistry, Saitama University, Shimo-Okubo 255, Saitama City, Saitama 338-8570, Japan
| | - Yutaro Sugiura
- Department of Chemistry, Saitama University, Shimo-Okubo 255, Saitama City, Saitama 338-8570, Japan
| | - Kohei Saito
- Department of Chemistry, Saitama University, Shimo-Okubo 255, Saitama City, Saitama 338-8570, Japan
| | - Toshiyuki Takayanagi
- Department of Chemistry, Saitama University, Shimo-Okubo 255, Saitama City, Saitama 338-8570, Japan
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Ortiz de Montellano PR. Acetylenes: cytochrome P450 oxidation and mechanism-based enzyme inactivation. Drug Metab Rev 2019; 51:162-177. [PMID: 31203694 DOI: 10.1080/03602532.2019.1632891] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
Abstract
The oxidation of carbon-carbon triple bonds by cytochrome P450 produces ketene metabolites that are hydrolyzed to acetic acid derivatives or are trapped by nucleophiles. In the special case of 17α-ethynyl sterols, D-ring expansion and de-ethynylation have been observed as competing pathways. The oxidation of acetylenic groups is also associated with mechanism-based inactivation of cytochrome P450 enzymes. One mechanism for this inactivation is reaction of the ketene metabolite with cytochrome P450 residues essential for substrate binding or catalysis. However, in the case of monosubstituted acetylenes, inactivation can also occur by addition of the oxidized acetylenic function to a nitrogen of the heme prosthetic group. This addition reaction is not mediated by the ketene metabolite, but rather occurs during oxygen transfer to the triple bond. In some instances, a detectable intermediate is formed that is most consistent with a ketocarbene-iron heme complex. This complex can progress to the N-alkylated heme or revert back to the unmodified enzyme. The ketocarbene complex may intervene in the formation of all the N-alkyl heme adducts, but is normally too unstable to be detected.
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Lewars E. Another possible planar tetracoordinate carbon saturated hydrocarbon, a computational study. CAN J CHEM 2019. [DOI: 10.1139/cjc-2018-0315] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
Abstract
Building on earlier computational work by Radom and Rasmussen, the author found a smaller candidate (C17H16) for a hydrocarbon with a planar tetracoordinate carbon atom than the candidate (C23H24) that had been reported by those workers. This molecule is apparently very unstable but nevertheless significant because it may be the smallest neutral hydrocarbon with such a carbon atom and its smaller size makes it easier to study at high computational levels.
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Affiliation(s)
- Errol Lewars
- Department of Chemistry, Trent University, Peterborough, ON K9J 7B8, Canada
- Department of Chemistry, Trent University, Peterborough, ON K9J 7B8, Canada
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Arora R, Kakkar R. Theoretical study of the mechanism of the Wolff rearrangement of some diazocarbonyl compounds. COMPUT THEOR CHEM 2016. [DOI: 10.1016/j.comptc.2016.08.020] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
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Lewars E. The chemistry of bowtiene (tricyclo[5.3.0.0 2,6]decapentaene): a computational study. CAN J CHEM 2014. [DOI: 10.1139/cjc-2014-0004] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/28/2023]
Abstract
Reactions of bowtiene (tricyclo[5.3.0.02,6]decapentaene, cyclobuta[1,2:3,4]dicyclopentene, bicyclopentadienylene, a tricyclic analogue of [10]annulene), in the sphere of unimolecular decomposition and dimerization were studied computationally to gauge its stability and reactivity, which are relevant to its feasability as a synthetic goal. The intuitively likeliest rearrangement mode to give species of lower energy begins with rearrangement to the 1,5-dehydronaphthalene diradical; this was calculated to have a barrier of approximately 220 kJ mol−1, too high for reaction at room temperature. Nevertheless, the energetics of rearrangement of the 1,5-diradical to the monocyclic 1,6-didehydro[10]annulene, a species of interest regarding its relationship to bowtiene and the diradical, were studied. The energy of bowtiene was compared with that of several other tricyclic 10π C10H6cyclic polyenes.
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Affiliation(s)
- Errol Lewars
- Department of Chemistry, Trent University, Peterborough, ON K9J 7B8, Canada
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Joo H, Shevlin PB, McKee ML. Computational Study of Carbon Atom (3P and 1D) Reaction with CH2O. Theoretical Evaluation of 1B1 Methylene Production by C (1D). J Am Chem Soc 2006; 128:6220-30. [PMID: 16669692 DOI: 10.1021/ja060216m] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
Singlet and triplet free energy surfaces for the reactions of C atom ((3)P and (1)D) with CH(2)O are studied computationally to evaluate the excited singlet ((1)B(1)) methylene formation from deoxygenation of CH(2)O by C ((1)D) atom as suggested by Shevlin et al. Carbon atoms can react by addition to the oxygen lone pair or to the C=O double bond on both the triplet and singlet surfaces. Triplet C ((3)P) atoms will deoxygenate to give CO plus CH(2) ((3)B(1)) as the major products, while singlet C ((1)D) reactions will form ketene and CO plus CH(2) ((1)A(1)). No definitive evidence of the formation of excited singlet ((1)B(1)) methylene was found on the singlet free energy surface. A conical intersection between the (1)A' and (1)A' ' surfaces located near an exit channel may play a role in product formation. The suggested (1)B(1) state of methylene may form via the (1)A' ' surface only if dynamic effects are important. In an effort to interpret experimental observation of products trapped by (Z)-2-butene, formation of cis- and trans-1,2-dimethylcyclopropane is studied computationally. The results suggests that "hot" ketene may react with (Z)-2-butene nonstereospecifically.
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Affiliation(s)
- Hyun Joo
- Department of Chemistry and Biochemistry, Auburn University, Auburn, Alabama 36849, USA
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