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For: Kumarevel TS, Gromiha MM, Selvaraj S, Gayatri K, Kumar PKR. Influence of medium- and long-range interactions in different folding types of globular proteins. Biophys Chem 2002;99:189-98. [PMID: 12377369 DOI: 10.1016/s0301-4622(02)00183-7] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/27/2022]
Number Cited by Other Article(s)
1
Harihar B, Saravanan KM, Gromiha MM, Selvaraj S. Importance of Inter-residue Contacts for Understanding Protein Folding and Unfolding Rates, Remote Homology, and Drug Design. Mol Biotechnol 2024:10.1007/s12033-024-01119-4. [PMID: 38498284 DOI: 10.1007/s12033-024-01119-4] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/16/2023] [Accepted: 02/10/2024] [Indexed: 03/20/2024]
2
Wang Y, Wang X, Gao T, Lou C, Wang H, Liu Y, Cao A. Folding of Flexible Protein Fragments and Design of Nanoparticle-Based Artificial Antibody Targeting Lysozyme. J Phys Chem B 2022;126:5045-5054. [PMID: 35763806 DOI: 10.1021/acs.jpcb.2c03200] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/22/2023]
3
Stojanović SĐ, Isenović ER, Zarić BL. Contribution of Non-Canonical Interactions to the Stability of Sm/LSm Oligomeric Assemblies. Mol Inform 2011;30:430-42. [DOI: 10.1002/minf.201000176] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/29/2010] [Accepted: 02/14/2011] [Indexed: 11/06/2022]
4
Guo J, Rao N, Liu G, Yang Y, Wang G. Predicting protein folding rates using the concept of Chou's pseudo amino acid composition. J Comput Chem 2011;32:1612-7. [PMID: 21328402 DOI: 10.1002/jcc.21740] [Citation(s) in RCA: 68] [Impact Index Per Article: 5.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/22/2010] [Revised: 11/04/2010] [Accepted: 12/02/2010] [Indexed: 12/12/2022]
5
Begum T, Ghosh TC. Understanding the Effect of Secondary Structures and Aggregation on Human Protein Folding Class Evolution. J Mol Evol 2010;71:60-9. [DOI: 10.1007/s00239-010-9364-9] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/18/2009] [Accepted: 06/23/2010] [Indexed: 12/01/2022]
6
Wu Z, Wang Y, Feng E, Chen L. A new geometric-topological method to measure protein fold similarity. Chem Phys Lett 2007. [DOI: 10.1016/j.cplett.2006.11.071] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
7
Biro JC. Amino acid size, charge, hydropathy indices and matrices for protein structure analysis. Theor Biol Med Model 2006;3:15. [PMID: 16551371 PMCID: PMC1450267 DOI: 10.1186/1742-4682-3-15] [Citation(s) in RCA: 54] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/16/2005] [Accepted: 03/22/2006] [Indexed: 01/31/2023]  Open
8
Gromiha MM, Selvaraj S. Inter-residue interactions in protein folding and stability. PROGRESS IN BIOPHYSICS AND MOLECULAR BIOLOGY 2004;86:235-77. [PMID: 15288760 DOI: 10.1016/j.pbiomolbio.2003.09.003] [Citation(s) in RCA: 207] [Impact Index Per Article: 10.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/01/2022]
9
Analysis of the amino acid effect on protein folding by atom pair contacts. POLYMER 2004. [DOI: 10.1016/j.polymer.2003.10.067] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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