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Fiorito S, Genovese S, Epifano F, Collevecchio C. Prolidase activity assays. A survey of the reported literature methodologies. Anal Biochem 2024; 689:115506. [PMID: 38460899 DOI: 10.1016/j.ab.2024.115506] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/30/2024] [Revised: 03/05/2024] [Accepted: 03/06/2024] [Indexed: 03/11/2024]
Abstract
Prolidase (EC.3.4.13.9) is a dipeptidase known nowadays to play a pivotal role in several physiological and pathological processes. More in particular, this enzyme is involved in the cleavage of proline- and hydroxyproline-containing dipeptides (imidodipeptides), thus finely regulating the homeostasis of free proline and hydroxyproline. Abnormally high or low levels of prolidase have been found in numerous acute and chronic syndromes affecting humans (chronic liver fibrosis, viral and acute hepatitis, cancer, neurological disorders, inflammation, skin diseases, intellectual disability, respiratory infection, and others) for which the content of proline is well recognized as a clinical marker. As a consequence, the accurate analytical determination of prolidase activity is of greatly significant importance in clinical diagnosis and therapy. Apart from the Chinard's assay, some other more sensitive and well validated methodologies have been published. These include colorimetric and spectrophotometric determinations of free proline produced by enzymatic reactions, capillary electrophoresis, matrix-assisted laser desorption/ionization time-of-flight mass spectrometry, electrochemoluminescence, thin layer chromatography, and HPLC. The aim of this comprehensive review is to make a detailed survey of the in so far reported analytical techniques, highlighting their general features, as well as their advantages and possible drawbacks, providing in the meantime suggestions to stimulate further research in this intriguing field.
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Affiliation(s)
- Serena Fiorito
- Dipartimento di Farmacia, Università"Gabriele d'Annunzio" Chieti - Pescara, Via dei Vestini 31, 66100, Chieti Scalo, CH, Italy
| | - Salvatore Genovese
- Dipartimento di Farmacia, Università"Gabriele d'Annunzio" Chieti - Pescara, Via dei Vestini 31, 66100, Chieti Scalo, CH, Italy.
| | - Francesco Epifano
- Dipartimento di Farmacia, Università"Gabriele d'Annunzio" Chieti - Pescara, Via dei Vestini 31, 66100, Chieti Scalo, CH, Italy.
| | - Chiara Collevecchio
- Dipartimento di Farmacia, Università"Gabriele d'Annunzio" Chieti - Pescara, Via dei Vestini 31, 66100, Chieti Scalo, CH, Italy
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2
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Microscale separation methods for enzyme kinetics assays. Anal Bioanal Chem 2012; 403:2185-95. [DOI: 10.1007/s00216-012-5744-x] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/29/2011] [Revised: 01/10/2012] [Accepted: 01/12/2012] [Indexed: 10/14/2022]
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Kinetic study of prolidase activity in erythrocytes against different substrates using capillary electrophoresis with electrochemiluminescence detection. J Chromatogr A 2008; 1200:255-9. [DOI: 10.1016/j.chroma.2008.05.040] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/17/2008] [Revised: 05/09/2008] [Accepted: 05/16/2008] [Indexed: 11/22/2022]
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Yuan J, Wei H, Jin W, Yang X, Wang E. Kinetic study of paracetamol on prolidase activity in erythrocytes by capillary electrophoresis with Ru(bpy)(3) (2+) electrochemiluminescence detection. Electrophoresis 2006; 27:4047-51. [PMID: 16991207 DOI: 10.1002/elps.200600197] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
Abstract
We explored the CE with (bpy) (2+) (3) electrochemiluminescence detection for the kinetic study of drug-enzyme interaction. Effects of four nonsteroidal anti-inflammatory drugs including aspirin, paracetamol, sodium salicylate and phenacetin on prolidase (PLD) activity in erythrocytes were investigated. Aspirin enhanced PLD activity whereas the other three had inhibiting effects. This may reveal their different effects on the collagen biosynthesis and catabolism that influence tumor invasiveness. Kinetic study of paracetamol on PLD showed that the value of Michaelis constant K(m) for PLD was 1.23 mM. The mechanism of PLD inhibition by paracetamol is noncompetitive inhibition, and the inhibitor constant K(i) value obtained in our research was 9.73 x 10(3) microg/L.
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Affiliation(s)
- Jipei Yuan
- State Key Laboratory of Electroanalytical Chemistry, Changchun Institute of Applied Chemistry, Chinese Academy of Sciences, Changchun, Jilin, China
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Glatz Z. Determination of enzymatic activity by capillary electrophoresis. J Chromatogr B Analyt Technol Biomed Life Sci 2006; 841:23-37. [PMID: 16574509 DOI: 10.1016/j.jchromb.2006.02.051] [Citation(s) in RCA: 61] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/10/2006] [Revised: 02/20/2006] [Accepted: 02/21/2006] [Indexed: 10/24/2022]
Abstract
Enzymes are biological catalysts that play an important role in biochemical reactions necessary for normal growth, maturation and reproduction through whole live world. Their accurate quantitation in biological samples is important in many fields of biochemistry, not only in routine biochemistry and in fundamental research, but also in clinical and pharmacological research and diagnosis. Since the direct measurement of enzymes by masses is impossible, they must be quantified by their catalytic activities. Many different methods have been applied for this purpose so far. Although photometric methods are undoubtedly the most frequently used, separation methods will further gain their position in this field. The article reviews different possibilities for the assay of enzymatic activity by means of capillary electrophoresis (CE). Both the off-line and on-line enzyme assays based on CE are discussed.
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Affiliation(s)
- Zdenek Glatz
- Department of Biochemistry, Faculty of Science, Masaryk University, Kamenice 5, 625 00 Brno, Czech Republic.
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Viglio S, Annovazzi L, Conti B, Genta I, Perugini P, Zanone C, Casado B, Cetta G, Iadarola P. The role of emerging techniques in the investigation of prolidase deficiency: From diagnosis to the development of a possible therapeutical approach. J Chromatogr B Analyt Technol Biomed Life Sci 2006; 832:1-8. [PMID: 16434239 DOI: 10.1016/j.jchromb.2005.12.049] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/27/2005] [Revised: 12/21/2005] [Accepted: 12/29/2005] [Indexed: 10/25/2022]
Abstract
The aim of the present article is to review the efforts performed in the past two decades by numerous research groups for the development of methods that allow a correct diagnosis of prolidase deficiency (PD), a rare autosomal recessive disorder and for the rationalization of a possible therapeutic intervention on these patients. In particular, the interest of the reader is focused on the application of capillary electrophoresis (i) for the detection of biological markers that reflect the pathological feature of the disease and (ii) for the determination of the efficiency of a carrier system in delivering prolidase inside cells in a possible therapy based on enzyme replacement.
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Affiliation(s)
- Simona Viglio
- Department of Biochemistry A. Castellani, University of Pavia, Via Taramelli 3/B I-27100 Pavia, Italy
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Perugini P, Hassan K, Genta I, Modena T, Pavanetto F, Cetta G, Zanone C, Iadarola P, Asti A, Conti B. Intracellular delivery of liposome-encapsulated prolidase in cultured fibroblasts from prolidase-deficient patients. J Control Release 2005; 102:181-90. [PMID: 15653144 DOI: 10.1016/j.jconrel.2004.09.013] [Citation(s) in RCA: 22] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/13/2004] [Accepted: 09/21/2004] [Indexed: 11/16/2022]
Abstract
Prolidase is a cytosolic exopeptidase whose deficiency causes the development of a rare autosomal recessive disorder known as Prolidase Deficiency (PD). The main manifestations of PD are intractable ulcerations of the skin, recurrent infections and mental retardation. At this time only a hazardous and expensive chronic therapy based on blood transfusions is the suggested treatment for PD. The aim of this work was to investigate the capability of utilizing liposomes as enzyme carriers: these vesicular systems have been recently evaluated as protein carriers for their potential in terms of "in vivo" localization, drug release and for protein stabilization in biological fluids. Liposomes were prepared, with a 1:1 PC:Col molar ratio with or without DSPE-PEG, by a thin-film hydration. Ex-vivo experiments were performed, incubating prolidase loaded liposomes with cultured fibroblasts from PD patients and from controls, to determine the amount of active enzyme delivered to cells. Evaluation of liposomes toxicity on cultured skin fibroblasts showed that liposomes did not interfere with cellular growth. Results showed that all the active prolidase encapsulated in the liposomes was completely vehiculated inside fibroblasts after 6 days incubation. SEM analysis suggests that prolidase is vehiculated inside the cell through liposome endocytosis.
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Affiliation(s)
- Paola Perugini
- Department of Pharmaceutical Chemistry, University of Pavia, V.le Taramelli 12, 27100 Pavia, Italy.
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Kurien BT, Patel NC, Porter AC, Kurono S, Matsumoto H, Wang H, Scofield RH. Determination of prolidase activity using matrix-assisted laser desorption/ionization time-of-flight mass spectrometry. Anal Biochem 2004; 331:224-9. [PMID: 15265726 DOI: 10.1016/j.ab.2004.04.043] [Citation(s) in RCA: 16] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/07/2003] [Indexed: 11/19/2022]
Abstract
Proline-containing peptides of the X-proline type are cleaved by the dipeptidase prolidase. The classical method of prolidase assay relied on the colorimetric estimation of the liberated proline with ninhydrin using acidic media and heat. This method, however, gave inconsistent results due to the nonspecificity of the ninhydrin color reaction. We report here a method for the detection of the liberated proline using matrix-assisted laser desorption/ionization time-of-flight (MALDI-TOF) mass spectrometry. Human sera were incubated with a mixture containing the dipeptide glycyl-proline in Tris-HCl supplemented with manganese at 37 degrees C for 24h. The samples were precipitated with trifluoroacetic acid and centrifuged. An aliquot of the supernatant was mixed with an equal volume of ferulic acid solution. An aliquot from this mixture was spotted on a stainless steel mass spectrometry grid and analyzed using MALDI-TOF mass spectrometry. The activity of the enzyme was determined by the complete disappearance of the glycyl-proline peak with the concomitant appearance of the proline peak and can be expressed in terms of the ratio of the area beneath the proline to the area beneath the glycyl-proline peak. Subjects homozygous for prolidase deficiency had a ratio ranging from 0.006 to 0.04 while obligatory heterozygotes had a ratio ranging from around 1.1 to 2.4. Normal subjects had ratios ranging from 9 to 239. Using this method we have unambiguously identified subjects with homozygous or heterozygous prolidase deficiency. In addition to the advantage of rapid sample preparation time, this method is highly specific, reproducible, and sensitive.
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Affiliation(s)
- Biji T Kurien
- Arthritis and Immunology Program, Oklahoma Medical Research Foundation, Oklahoma City, OK 73104, USA.
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Iadarola P, Annovazzi L, Lupi A, Luisetti M, Casado B, Doring G, Worlitzsch D, Cetta G, Viglio S. CAPILLARY ELECTROPHORESIS AS A MODERN TOOL FOR DETERMINING PROTEOLYTIC ACTIVITIES IN PURIFIED SPECIMENS AND IN REAL SAMPLES. J LIQ CHROMATOGR R T 2002. [DOI: 10.1081/jlc-120013989] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/03/2022]
Affiliation(s)
- Paolo Iadarola
- a Dipartimento di Biochimica “A. Castellani” , Università di Pavia , Via Taramelli 3/B, Pavia, 27100, Italy
| | - Laura Annovazzi
- a Dipartimento di Biochimica “A. Castellani” , Università di Pavia , Via Taramelli 3/B, Pavia, 27100, Italy
| | - Anna Lupi
- a Dipartimento di Biochimica “A. Castellani” , Università di Pavia , Via Taramelli 3/B, Pavia, 27100, Italy
| | - Maurizio Luisetti
- b Laboratorio di Biochimica e Genetica , Clinica di Malattie dell'Apparato Respiratorio , IRCCS Policlinico , San Matteo, Pavia, Italy
| | - Begona Casado
- c Department of Medicine , Georgetown University , Washington, DC, 20007, U.S.A
| | - Gerd Doring
- d Department of General and Environmental Hygiene , Hygiene Institute , University of Tuebingen , Tuebingen, Germany
| | - Dieter Worlitzsch
- d Department of General and Environmental Hygiene , Hygiene Institute , University of Tuebingen , Tuebingen, Germany
| | - Giuseppe Cetta
- a Dipartimento di Biochimica “A. Castellani” , Università di Pavia , Via Taramelli 3/B, Pavia, 27100, Italy
| | - Simona Viglio
- a Dipartimento di Biochimica “A. Castellani” , Università di Pavia , Via Taramelli 3/B, Pavia, 27100, Italy
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Dyne K, Zanaboni G, Bertazzoni M, Cetta G, Viglio S, Lupi A, Iadarola P. Mild, late-onset prolidase deficiency: another Italian case. Br J Dermatol 2001; 144:635-6. [PMID: 11260036 DOI: 10.1046/j.1365-2133.2001.04106.x] [Citation(s) in RCA: 23] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
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Consonni R, Zetta L, Longhi R, Toma L, Zanaboni G, Tenni R. Conformational analysis and stability of collagen peptides by CD and by 1H- and 13C-NMR spectroscopies. Biopolymers 2000; 53:99-111. [PMID: 10644954 DOI: 10.1002/(sici)1097-0282(200001)53:1<99::aid-bip9>3.0.co;2-d] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
Abstract
Four small type I collagen CNBr peptides containing complete natural sequences were purified from bovine skin and investigated by CD and 1H- and 13C-nmr spectroscopies to obtain information concerning their conformation and thermal stability. CD showed that a triple helix was formed at 10 degrees C in acidic aqueous solution by peptide alpha l(I) CB2 only, and to lesser extent, by alpha 1(I) CB4, whereas peptides alpha 1(I) CB5 and alpha 2(I) CB2 remained unstructured. Analytical gel filtration confirmed that peptides alpha 1(I) CB2 and alpha 1(I) CB4 only were able to form trimeric species at temperature between 14 and 20 degrees C, and indicated that the monomer = trimer equilibrium was influenced by the chaotropic nature of the salt present in the eluent, by its concentration, and by temperature variations. CD measurements at increasing temperatures showed that alpha 1(I) CB2 was less stable than its synthetic counterpart due to incomplete prolyl hydroxylation of the preparation from the natural source. 1H- and 13C-nmr spectra acquired in the temperature range 0-47 and 0-27 degrees C, respectively, indicated that with decreasing temperature the most abundant from of alpha 1(I) CB2 was in slow exchange with an assembled form, characterized by broad lines, as expected for the triple-helical conformation. A large number of trimer cross peaks was observed both in the proton and carbon spectra, and these were most likely due to the nonequivalence of the environments of the three chains in the triple helix. This nonequivalence may have implications for the aggregation of collagen molecules and for collagen binding to other molecules. The thermal transition from trimer to monomer was also monitored by 1H-nmr following the change in area of the signal belonging to one of the two beta protons of the C-terminal homoserine. The unfolding process was found to be fully reversible with a melting temperature of 13.4 degrees C, in agreement with CD results. The qualitative superposition of the melting curves obtained by CD for the peptide bond characteristics and by nmr for a side chain suggests that triple-helical backbone and side chains constitute a single unit.
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12
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Viglio S, Valentini G, Zanaboni G, Cetta G, De Gregorio A, Iadarola P. Rapid detection of ornithine transcarbamylase activity by micellar electrokinetic chromatography. Electrophoresis 1999; 20:138-44. [PMID: 10065970 DOI: 10.1002/(sici)1522-2683(19990101)20:1<138::aid-elps138>3.0.co;2-v] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
Abstract
A quantitative ultraviolet detection method for determining ornithine transcarbamylase (OTC-ase) activity using micellar electrokinetic chromatography (MEKC) is described. The method is based on the direct determination of citrulline formed upon enzymatic reaction. Using a background electrolyte consisting of 35 mM sodium tetraborate, pH 9.3, containing 65 mM sodium dodecyl sulfate (SDS), the peak of citrulline in the electropherogram was easily identified and integrated. This allowed us to determine the rate of formation of the reaction product and to calculate the kinetic parameter Km of the OTC-ase investigated. The capillary electrophoretic method developed was applied to the determination of OTC-ase activity in plasma samples for citrulline in the nanogram range.
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Affiliation(s)
- S Viglio
- Dipartimento di Biochimica A. Castellani, Università di Pavia, Italy
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Viglio S, Zanaboni G, Luisetti M, Cetta G, Guglielminetti M, Iadarola P. Micellar electrokinetic chromatography: a convenient alternative to colorimetric and high performance liquid chromatographic detection to monitor protease activity. Electrophoresis 1998; 19:2083-9. [PMID: 9761185 DOI: 10.1002/elps.1150191207] [Citation(s) in RCA: 21] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Abstract
High performance capillary electrophoresis (HPCE) has been exploited as an analytical method alternative to current procedures for the determination of proteolytic activity of elastases from different sources. Due to some drawbacks with capillary zone electrophoresis (CZE), the mode of operation employed for the assay of elastolytic activity was micellar electrokinetic chromatography (MEKC). Using a background electrolyte consisting of 35 mM sodium tetraborate, pH 9.3, containing 65 mM SDS and 15% v/v methanol, separation of intact peptide substrate from products of proteolytic reaction was easily achieved in a fused-silica capillary of 50 cm effective length x 75 microm ID. This allowed us to determine the rate of hydrolysis of substrates and to calculate the kinetic parameters Km and k(cat) of the proteases investigated. A comparison of these data with those obtained from high performance liquid chromatography (HPLC)-based experiments showed that MEKC is a convenient technique for studying protease kinetics.
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Affiliation(s)
- S Viglio
- Dipartimento di Biochimica A. Castellani, Università di Pavia, Italy
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