1
|
Pan L, Yuan B, Li Q, Ouyang J, Yang J, Zhou Y, Cui C. Efficient biodegradation of chlorobenzene via monooxygenation pathways by Pandoraea sp. XJJ-1 with high potential for groundwater bioremediation. Int Microbiol 2024:10.1007/s10123-024-00544-4. [PMID: 38900217 DOI: 10.1007/s10123-024-00544-4] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/01/2024] [Revised: 05/15/2024] [Accepted: 06/04/2024] [Indexed: 06/21/2024]
Abstract
Chlorobenzene (CB), extensively used in industrial processes, has emerged as a significant contaminant in soil and groundwater. The eco-friendly and cost-effective microbial remediation has been increasingly favored to address this environmental challenge. In this study, a degrading bacterium was isolated from CB-contaminated soil at a pesticide plant, identified as Pandoraea sp. XJJ-1 (CCTCC M 2021057). This strain completely degraded 100 mg·L-1 CB and showed extensive degradability across a range of pH (5.0-9.0), temperature (10-37 °C), and CB concentrations (100-600 mg·L-1). Notably, the degradation efficiency was 85.2% at 15 °C, and the strain could also degrade six other aromatic hydrocarbons, including benzene, toluene, ethylbenzene, and xylene (o-, m-, p-). The metabolic pathway of CB was inferred using ultraperformance liquid chromatography, gas chromatography-mass spectrometry, and genomic analysis. In strain XJJ-1, CB was metabolized to o-chlorophenol and 3-chloroxychol by CB monooxygenase, followed by ortho-cleavage by the action of 3-chlorocatechol 1,2-dioxygenase. Moreover, the presence of the chlorobenzene monooxygenation pathway metabolism in strain XJJ-1 is reported for the first time in Pandoraea. As a bacterium with low-temperature resistance and composite pollutant degradation capacity, strain XJJ-1 has the potential application prospects in the in-situ bioremediation of CB-contaminated sites.
Collapse
Affiliation(s)
- Lixu Pan
- State Environmental Protection Key Laboratory of Environmental Risk Assessment and Control On Chemical Process, School of Resources and Environmental Engineering, East China University of Science and Technology, Shanghai, 200237, China
| | - Bo Yuan
- State Environmental Protection Key Laboratory of Environmental Risk Assessment and Control On Chemical Process, School of Resources and Environmental Engineering, East China University of Science and Technology, Shanghai, 200237, China
| | - Qingqing Li
- State Environment Protection Engineering Center for Urban Soil Contamination Control and Remediation, Shanghai Academy of Environmental Sciences, Shanghai, 200233, China
| | - Ji Ouyang
- State Environmental Protection Key Laboratory of Environmental Risk Assessment and Control On Chemical Process, School of Resources and Environmental Engineering, East China University of Science and Technology, Shanghai, 200237, China
| | - Jie Yang
- State Environment Protection Engineering Center for Urban Soil Contamination Control and Remediation, Shanghai Academy of Environmental Sciences, Shanghai, 200233, China
| | - Yan Zhou
- Sinopec Fifth Construction Co., Ltd, Guangzhou, 510145, China
| | - Changzheng Cui
- State Environmental Protection Key Laboratory of Environmental Risk Assessment and Control On Chemical Process, School of Resources and Environmental Engineering, East China University of Science and Technology, Shanghai, 200237, China.
- Institute of Pollution Control and Ecological Security, Shanghai, 200092, China.
| |
Collapse
|
2
|
Liu N, Yao YY, Zhang J, Zhang JG, Wu C, Ouyang DJ, Zou CY, Yang ZQ, Li JX. Reduction characteristic of chlorobenzene by a newly isolated Paenarthrobacter ureafaciens LY from a pharmaceutical wastewater treatment plant. Cell Biochem Funct 2024; 42:e3965. [PMID: 38457283 DOI: 10.1002/cbf.3965] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/11/2023] [Revised: 02/20/2024] [Accepted: 02/21/2024] [Indexed: 03/10/2024]
Abstract
A highly efficient chlorobenzene-degrading strain was isolated from the sludge of a sewage treatment plant associated with a pharmaceutical company. The strain exhibited a similarity of over 99.9% with multiple strains of Paenarthrobacter ureafaciens. Therefore, the strain was suggested to be P. ureafaciens LY. This novel strain exhibited a broad spectrum of pollutant degradation capabilities, effectively degrading chlorobenzene and other organic pollutants, such as 1, 2, 4-trichlorobenzene, phenol, and xylene. Moreover, P. ureafaciens LY co-metabolized mixtures of chlorobenzene with 1, 2, 4-trichlorobenzene or phenol. Evaluation of its degradation efficiency showed that it achieved an impressive degradation rate of 94.78% for chlorobenzene within 8 h. The Haldane-Andrews model was used to describe the growth of P. ureafaciens LY under specific pollutants and its concentrations, revealing a maximum specific growth rate (μmax ) of 0.33 h-1 . The isolation and characterization of P. ureafaciens LY, along with its ability to degrade chlorobenzene, provides valuable insights for the development of efficient and eco-friendly approaches to mitigate chlorobenzene contamination. Additionally, investigation of the degradation performance of the strain in the presence of other pollutants offers important information for understanding the complexities of co-metabolism in mixed-pollutant environments.
Collapse
Affiliation(s)
- Nan Liu
- Key Laboratory of Pollution Treatment and Resource, China National Light Industry, Collaborative Innovation Center of Environmental Pollution Control and Ecological Restoration, Zhengzhou, Henan, China
- Department of Material and Chemical Engineering, Zhengzhou University of Light Industry, Zhengzhou, China
| | - Yan-Yan Yao
- Key Laboratory of Pollution Treatment and Resource, China National Light Industry, Collaborative Innovation Center of Environmental Pollution Control and Ecological Restoration, Zhengzhou, Henan, China
- Department of Material and Chemical Engineering, Zhengzhou University of Light Industry, Zhengzhou, China
| | - Jin Zhang
- Key Laboratory of Pollution Treatment and Resource, China National Light Industry, Collaborative Innovation Center of Environmental Pollution Control and Ecological Restoration, Zhengzhou, Henan, China
- Department of Material and Chemical Engineering, Zhengzhou University of Light Industry, Zhengzhou, China
| | - Ji-Guo Zhang
- Key Laboratory of Pollution Treatment and Resource, China National Light Industry, Collaborative Innovation Center of Environmental Pollution Control and Ecological Restoration, Zhengzhou, Henan, China
- Department of Material and Chemical Engineering, Zhengzhou University of Light Industry, Zhengzhou, China
| | - Chao Wu
- Zhejiang Ecology and Environment Group Co., Ltd., Hangzhou, China
| | - Du-Juan Ouyang
- College of Chemical Engineering, Zhengzhou University, Zhengzhou, China
| | - Chang-Yong Zou
- Key Laboratory of Pollution Treatment and Resource, China National Light Industry, Collaborative Innovation Center of Environmental Pollution Control and Ecological Restoration, Zhengzhou, Henan, China
- Department of Material and Chemical Engineering, Zhengzhou University of Light Industry, Zhengzhou, China
| | - Zhen-Qiang Yang
- Institute of Chemistry Co. Ltd, Henan Academy of Sciences, Zhengzhou, China
| | - Ji-Xiang Li
- Shanghai Advanced Research Institute, Chinese Academy of Sciences, Shanghai, China
- University of Chinese Academy of Sciences, Beijing, China
| |
Collapse
|
3
|
You J, Ye L, Kong X, Duan Y, Zhao J, Chen J, Chen D. Efficient biodechlorination at the Fe 3O 4-based silicone powder modified chlorobenzene-affinity anode. JOURNAL OF HAZARDOUS MATERIALS 2023; 457:131794. [PMID: 37315409 DOI: 10.1016/j.jhazmat.2023.131794] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/17/2023] [Revised: 05/14/2023] [Accepted: 06/05/2023] [Indexed: 06/16/2023]
Abstract
The treatment of chlorinated volatile organic compounds faces challenges of secondary pollution and less-efficiency due to the substitution of chlorine. Microbial fuel cells (MFCs) provide a promising opportunity for its abatement. In this study, a novel Fe3O4 nanoparticles and silicone-based powder (SP) were integrated and immobilized on carbon felt (CF+Fe3O4@SP), which was further used as anode in the chlorobenzene (CB) powered MFC. Owing to the cooperation between SP and Fe3O4, the anode exhibited excellent performance for both biodechlorination and power generation. The results indicated that the CF+Fe3O4@SP anode loaded MFC achieved 98.5% removal of 200 mg/L CB within 28 h, and the maximum power density was 675.9 mW/m3, which was a 45.6% increase compared to that of the bare CF anode. Microbial community analysis indicated that the genera Comamonadaceae, Pandoraea, Obscuribacteraceae, and Truepera were dominated, especially, the Comamonadaceae and Obscuribacteraceae showed outstanding affinity for Fe3O4 and SP, respectively. Moreover, the proportion of live bacteria, secretion of extracellular polymer substances, and protein content in the extracellular polymer substances were significantly increased by modifying Fe3O4@SP onto the carbon-based anode. Thus, this study provides new insights into the development of MFCs for refractory and hydrophobic volatile organic compounds removal.
Collapse
Affiliation(s)
- Juping You
- Zhejiang Key Laboratory of Petrochemical Environmental Pollution Control, Zhejiang Ocean University, Zhoushan 316022, China
| | - Lei Ye
- Zhejiang Key Laboratory of Petrochemical Environmental Pollution Control, Zhejiang Ocean University, Zhoushan 316022, China
| | - Xianwang Kong
- Zhejiang Key Laboratory of Petrochemical Environmental Pollution Control, Zhejiang Ocean University, Zhoushan 316022, China
| | - Yuqi Duan
- Zhejiang Key Laboratory of Petrochemical Environmental Pollution Control, Zhejiang Ocean University, Zhoushan 316022, China
| | - Jingkai Zhao
- Zhejiang Key Laboratory of Petrochemical Environmental Pollution Control, Zhejiang Ocean University, Zhoushan 316022, China; College of Environment, Zhejiang University of Technology, Hangzhou 310014, China
| | - Jianmeng Chen
- Zhejiang Key Laboratory of Petrochemical Environmental Pollution Control, Zhejiang Ocean University, Zhoushan 316022, China; College of Environment, Zhejiang University of Technology, Hangzhou 310014, China
| | - Dongzhi Chen
- Zhejiang Key Laboratory of Petrochemical Environmental Pollution Control, Zhejiang Ocean University, Zhoushan 316022, China.
| |
Collapse
|
4
|
Azaritorbat A, Nasernejad B. Optimization of the Removal Efficiency of o-Toluidine: Adsorption on Sugarcane Bagasse or Biodegradation Using Phanerochaete chrysosporium Immobilized on Bagasse? SOUTH AFRICAN JOURNAL OF CHEMICAL ENGINEERING 2023. [DOI: 10.1016/j.sajce.2023.02.003] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 03/09/2023] Open
|
5
|
Wang Y, Xiang Q, Zhou Q, Xu J, Pei D. Mini Review: Advances in 2-Haloacid Dehalogenases. Front Microbiol 2021; 12:758886. [PMID: 34721367 PMCID: PMC8554231 DOI: 10.3389/fmicb.2021.758886] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/15/2021] [Accepted: 09/13/2021] [Indexed: 11/13/2022] Open
Abstract
The 2-haloacid dehalogenases (EC 3.8.1.X) are industrially important enzymes that catalyze the cleavage of carbon-halogen bonds in 2-haloalkanoic acids, releasing halogen ions and producing corresponding 2-hydroxyl acids. These enzymes are of particular interest in environmental remediation and environmentally friendly synthesis of optically pure chiral compounds due to their ability to degrade a wide range of halogenated compounds with astonishing efficiency for enantiomer resolution. The 2-haloacid dehalogenases have been extensively studied with regard to their biochemical characterization, protein crystal structures, and catalytic mechanisms. This paper comprehensively reviews the source of isolation, classification, protein structures, reaction mechanisms, biochemical properties, and application of 2-haloacid dehalogenases; current trends and avenues for further development have also been included.
Collapse
Affiliation(s)
- Yayue Wang
- College of Biology and Food, Shangqiu Normal University, Shangqiu, China
| | - Qiao Xiang
- College of Biology and Food, Shangqiu Normal University, Shangqiu, China
- College of Life Sciences, Henan Normal University, Xinxiang, China
| | - Qingfeng Zhou
- College of Biology and Food, Shangqiu Normal University, Shangqiu, China
| | - Jingliang Xu
- School of Chemical Engineering, Zhengzhou University, Zhengzhou, China
- Zhengzhou Tuoyang Industrial Co., Ltd., Zhengzhou, China
| | - Dongli Pei
- College of Biology and Food, Shangqiu Normal University, Shangqiu, China
| |
Collapse
|
6
|
de Almeida AP, Macrae A, Ribeiro BD, do Nascimento RP. Decolorization and detoxification of different azo dyes by Phanerochaete chrysosporium ME-446 under submerged fermentation. Braz J Microbiol 2021; 52:727-738. [PMID: 33694059 PMCID: PMC8105446 DOI: 10.1007/s42770-021-00458-7] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/29/2020] [Accepted: 02/23/2021] [Indexed: 11/28/2022] Open
Abstract
Azo dyes are widely used in the textile industry due to their resistance to light, moisture, and oxidants. They are also an important class of environmental contaminant because of the amount of dye that reaches natural water resources and because they can be toxic, mutagenic, and carcinogenic. Different technologies are used for the decolorization of wastewater containing dyes; among them, the biological processes are the most promising environmentally. The aim of this study was to evaluate the potential of Phanerochaete chrysosporium strain ME-446 to safely decolorize three azo dyes: Direct Yellow 27 (DY27), Reactive Black 5 (RB5), and Reactive Red 120 (RR120). Decolorization efficiency was determined by ultraviolet-visible spectrophotometry and the phytotoxicity of the solutions before and after the fungal treatment was analyzed using Lactuca sativa seeds. P. chrysosporium ME-446 was highly efficient in decolorizing DY27, RB5, and RR120 at 50 mg L-1, decreasing their colors by 82%, 89%, and 94% within 10 days. Removal of dyes was achieved through adsorption on the fungal mycelium as well as biodegradation, inferred by the changes in the dyes' spectral peaks. The intensive decolorization of DY27 and RB5 corresponded to a decrease in phytotoxicity. However, phytotoxicity increased during the removal of color for the dye RR120. The ecotoxicity tests showed that the absence of color does not necessarily translate to an absence of toxicity.
Collapse
Affiliation(s)
- Alana Pereira de Almeida
- Laboratório de Ecologia e Processos Microbianos, Departamento de Engenharia Bioquímica, Escola de Química, Universidade Federal do Rio de Janeiro, Av. Athos da Silveira Ramos, 149, Rio de Janeiro, RJ, 21941-909, Brazil.
- Programa de Pós-Graduação em Biotecnologia Vegetal e Bioprocessos, Decania, Centro de Ciências da Saúde, Universidade Federal do Rio de Janeiro, Av. Carlos Chagas Filho, 373, Rio de Janeiro, 21941-902, RJ, Brazil.
| | - Andrew Macrae
- Programa de Pós-Graduação em Biotecnologia Vegetal e Bioprocessos, Decania, Centro de Ciências da Saúde, Universidade Federal do Rio de Janeiro, Av. Carlos Chagas Filho, 373, Rio de Janeiro, 21941-902, RJ, Brazil
- Laboratório de Biotecnologia Sustentável e Bioinformática Microbiana, Instituto de Microbiologia Paulo de Góes, Centro de Ciências da Saúde, Universidade Federal do Rio de Janeiro, Av. Carlos Chagas Filho, 373, Rio de Janeiro, 21941-902, RJ, Brazil
| | - Bernardo Dias Ribeiro
- Escola de Química, Universidade Federal do Rio de Janeiro, Av. Athos da Silveira Ramos, 149, Rio de Janeiro, 21941-909, RJ, Brazil
| | - Rodrigo Pires do Nascimento
- Laboratório de Ecologia e Processos Microbianos, Departamento de Engenharia Bioquímica, Escola de Química, Universidade Federal do Rio de Janeiro, Av. Athos da Silveira Ramos, 149, Rio de Janeiro, RJ, 21941-909, Brazil
- Programa de Pós-Graduação em Biotecnologia Vegetal e Bioprocessos, Decania, Centro de Ciências da Saúde, Universidade Federal do Rio de Janeiro, Av. Carlos Chagas Filho, 373, Rio de Janeiro, 21941-902, RJ, Brazil
| |
Collapse
|
7
|
Biocatalytic potential of basidiomycetes: Relevance, challenges and research interventions in industrial processes. SCIENTIFIC AFRICAN 2021. [DOI: 10.1016/j.sciaf.2021.e00717] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022] Open
|
8
|
Liu Y, Zheng L, Cai Q, Xu Y, Xie Z, Liu J, Ning X. Simultaneous reduction of antibiotics and antibiotic resistance genes in pig manure using a composting process with a novel microbial agent. ECOTOXICOLOGY AND ENVIRONMENTAL SAFETY 2021; 208:111724. [PMID: 33396055 DOI: 10.1016/j.ecoenv.2020.111724] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/03/2020] [Revised: 11/14/2020] [Accepted: 11/23/2020] [Indexed: 06/12/2023]
Abstract
In recent years, in order to promote animal growth and reduce the risk of disease, a variety of antibiotics are frequently added to the animal feed of livestock and poultry. However, these antibiotics can not be fully digested by animals and most of them are excreted with feces, consequently causing the enrichment of antibiotic resistance genes (ARGs) and huge environmental risks. Nowadays, composting is a better option to solve these problems. Accordingly, this study explored the effects of co-composting swine manure with different inoculants dominated by Phanerochaete chrysosporium (p), Aspergillus niger (a), and Bacillus licheniformis (b) on the simultaneous removal of multiple antibiotics and resistance genes and evolution of the bacterial community. The results showed that the highest removal extent of tetracycline and oxytetracycline occurred in pile D (p:b:a=1:5:5, biomass) reaching 89.2% and 87.8%, respectively, while the highest removal extent of doxycycline and enrofloxacin occurred in pile A (p:b:a=1:0:0, biomass) reaching 98.6% and 89%, respectively. Compared with the levels in pile B (control check), in pile D, ARGs, except those for sulfonamides, decreased by 1.059 × 10-3-6.68 × 10-2 gene copies/16S rRNA copies. Inoculation with p alone effectively reduced intI1 and intI2. Canonical correspondence analysis (CCA) that microbial community structure evolution had a greater influence on ARGs than environmental factors. In summary, this study provided a feasible way to efficiently remove the antibiotics and antibiotic resistance genes in pig manure.
Collapse
Affiliation(s)
- Yanting Liu
- Guangdong Key Laboratory of Environmental Catalysis and Health Risk Control, Guangzhou Key Laboratory Environmental Catalysis and Pollution Control, Institute of Environmental Health and Pollution Control, College of Environmental Science and Engineering, Guangdong University of Technology, Guangzhou 510006, China
| | - Li Zheng
- Guangdong Key Laboratory of Environmental Catalysis and Health Risk Control, Guangzhou Key Laboratory Environmental Catalysis and Pollution Control, Institute of Environmental Health and Pollution Control, College of Environmental Science and Engineering, Guangdong University of Technology, Guangzhou 510006, China.
| | - Qiujie Cai
- Guangdong Key Laboratory of Environmental Catalysis and Health Risk Control, Guangzhou Key Laboratory Environmental Catalysis and Pollution Control, Institute of Environmental Health and Pollution Control, College of Environmental Science and Engineering, Guangdong University of Technology, Guangzhou 510006, China
| | - Yanbin Xu
- Guangdong Key Laboratory of Environmental Catalysis and Health Risk Control, Guangzhou Key Laboratory Environmental Catalysis and Pollution Control, Institute of Environmental Health and Pollution Control, College of Environmental Science and Engineering, Guangdong University of Technology, Guangzhou 510006, China
| | - Zhifan Xie
- Guangdong Key Laboratory of Environmental Catalysis and Health Risk Control, Guangzhou Key Laboratory Environmental Catalysis and Pollution Control, Institute of Environmental Health and Pollution Control, College of Environmental Science and Engineering, Guangdong University of Technology, Guangzhou 510006, China
| | - Jingyong Liu
- Guangdong Key Laboratory of Environmental Catalysis and Health Risk Control, Guangzhou Key Laboratory Environmental Catalysis and Pollution Control, Institute of Environmental Health and Pollution Control, College of Environmental Science and Engineering, Guangdong University of Technology, Guangzhou 510006, China
| | - Xunan Ning
- Guangdong Key Laboratory of Environmental Catalysis and Health Risk Control, Guangzhou Key Laboratory Environmental Catalysis and Pollution Control, Institute of Environmental Health and Pollution Control, College of Environmental Science and Engineering, Guangdong University of Technology, Guangzhou 510006, China.
| |
Collapse
|
9
|
Qiao W, Zhang Y, Xie Z, Luo Y, Zhang X, Sang C, Xie S, Huang J. Toxicity of perfluorooctane sulfonate on Phanerochaete chrysosporium: Growth, pollutant degradation and transcriptomics. ECOTOXICOLOGY AND ENVIRONMENTAL SAFETY 2019; 174:66-74. [PMID: 30822669 DOI: 10.1016/j.ecoenv.2019.02.066] [Citation(s) in RCA: 19] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/30/2018] [Revised: 02/18/2019] [Accepted: 02/20/2019] [Indexed: 06/09/2023]
Abstract
As a persistent organic pollutant listed in the Stockholm Convention, perfluorooctane sulfonate (PFOS) is extremely refractory to degradation under ambient conditions. Its potential ecotoxicity has aroused great concerns and research interests. However, little is known about the toxicity of PFOS on fungus. In this study, the white rot fungus Phanerochaete chrysosporium (P. chrysosporium) was adopted to assess the toxicity of PFOS in liquid culture. The addition of 100 mg/L PFOS potassium salt significantly decreased the fungal biomass by up to 76.4% comparing with un-amended control during the incubation period. The hyphostroma of P. chrysosporium was wizened and its cell membrane was thickened, while its vesicle structure was increased, based on the observation with scanning electron microscope (SEM) and transmission electron microscope (TEM). Nevertheless, the PFOS dosage of below 100 mg/L did not show a considerable damage to the growth of P. chrysosporium. The degradation of malachite green (MG) and 2,4-dichlorophenol (2,4-DCP) by P. chrysosporium was negatively affected by PFOS. At the initial dosage of 100 mg/L PFOS, the decolorization efficiency of MG and the degradation efficiency of 2,4-DCP decreased by 37% and 20%, respectively. This might be attributed to the inhibition of PFOS on MnP and LiP activities. The activities of MnP and LiP decreased by 20.6% and 43.4%, respectively. At a high dosage PFOS (100 mg/L), P. chrysosporium could show a high adsorption of MG but lose its pollutant degradation ability. Transcriptome analysis indicated that PFOS contamination could lead to the change of gene expression in the studied white rot fungus, and the genes regulating membrane structure, cell redox process, and cell transport, synthesis and metabolism were impacted. Membrane damage and oxidative damage were the two main mechanisms of PFOS' toxicity to P. chrysosporium.
Collapse
Affiliation(s)
- Weichuan Qiao
- Department of Environmental Engineering, College of Biology and the Environment, Nanjing Forestry University, Nanjing 210037, China
| | - Yunhao Zhang
- Department of Environmental Engineering, College of Biology and the Environment, Nanjing Forestry University, Nanjing 210037, China
| | - Zhenyu Xie
- Department of Environmental Engineering, College of Biology and the Environment, Nanjing Forestry University, Nanjing 210037, China
| | - Yang Luo
- Department of Environmental Engineering, College of Biology and the Environment, Nanjing Forestry University, Nanjing 210037, China
| | - Xuansong Zhang
- Department of Environmental Engineering, College of Biology and the Environment, Nanjing Forestry University, Nanjing 210037, China
| | - Cunxing Sang
- Department of Environmental Engineering, College of Biology and the Environment, Nanjing Forestry University, Nanjing 210037, China
| | - Shuguang Xie
- State Key Joint Laboratory of Environmental Simulation and Pollution Control (SKJLESPC), College of Environmental Sciences and Engineering, Peking University, Beijing 100871, China.
| | - Jun Huang
- State Key Joint Laboratory of Environment Simulation and Pollution Control (SKJLESPC), Beijing Key Laboratory for Emerging Organic Contaminants Control(BKLEOC), School of Environment, POPs Research Center, Tsinghua University, Beijing 100084, China.
| |
Collapse
|
10
|
Transcriptome Sequencing and Comparative Analysis of Piptoporus betulinus in Response to Birch Sawdust Induction. FORESTS 2017. [DOI: 10.3390/f8100374] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
|
11
|
Genomic and transcriptomic analysis of the toluene degrading black yeast Cladophialophora immunda. Sci Rep 2017; 7:11436. [PMID: 28900256 PMCID: PMC5595782 DOI: 10.1038/s41598-017-11807-8] [Citation(s) in RCA: 22] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/06/2017] [Accepted: 08/30/2017] [Indexed: 12/30/2022] Open
Abstract
Cladophialophora immunda is an ascomycotal species belonging to the group of the black yeasts. These fungi have a thick and melanized cell wall and other physiological adaptations that allows them to cope with several extreme physical and chemical conditions. Member of the group can colonize some of the most extremophilic environments on Earth. Cladophialophora immunda together with a few other species of the order Chaetothyriales show a special association with hydrocarbon polluted environments. The finding that the fungus is able to completely mineralize toluene makes it an interesting candidate for bioremediation purposes. The present study is the first transcriptomic investigation of a fungus grown in presence of toluene as sole carbon and energy source. We could observe the activation of genes involved in toluene degradatation and several stress response mechanisms which allowed the fungus to survive the toluene exposure. The thorough comparative genomics analysis allowed us to identify several events of horizontal gene transfer between bacteria and Cladophialophora immunda and unveil toluene degradation steps that were previously reported in bacteria. The work presented here aims to give new insights into the ecology of Cladophialophora immunda and its adaptation strategies to hydrocarbon polluted environments.
Collapse
|
12
|
Gliszczyńska A, Gładkowski W, Świtalska M, Wietrzyk J, Szumny A, Gębarowska E, Wawrzeńczyk C. Dehalogenation Activity of Selected Fungi Toward δ-Iodo-γ-Lactone Derived from trans,trans-Farnesol. Chem Biodivers 2017; 13:477-82. [PMID: 26923572 DOI: 10.1002/cbdv.201500127] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/13/2015] [Accepted: 09/21/2015] [Indexed: 11/08/2022]
Abstract
Time-course of biotransformation of racemic trans-4-((E)-4',8'-dimethylnona-3',7'-dien-1-yl)-5-iodomethyl-4-methyldihydrofuran-2-one (1) in fungal and yeast cultures was investigated. In these conditions, the substrate 1 was enantioselectively dehalogenated yielding 4-((E)-4',8'-dimethylnona-3',7'-dien-1-yl)-4-methyl-5-methylenedihydrofuran-2-one (2) and its structure was established based on the spectroscopic data. The most effective biocatalyst used was Didymosphaeria igniaria, which catalyzed the process with highest rate and enantioselectivity (ee of product = 76%). The antiproliferative activity of δ-iodo-γ-lactone 1, product of its biotransformation 2, and starting substrate (farnesol) were evaluated toward two cancer cell lines: A549 (human lung adenocarcinoma) and HL-60 (human promyelocytic leukemia).
Collapse
Affiliation(s)
- Anna Gliszczyńska
- Department of Chemistry, Wroclaw University of Environmental and Life Sciences, Norwida 25, PL-50-375, Wrocław
| | - Witold Gładkowski
- Department of Chemistry, Wroclaw University of Environmental and Life Sciences, Norwida 25, PL-50-375, Wrocław
| | - Marta Świtalska
- Department of Experimental Oncology, Polish Academy of Sciences, Ludwik Hirszfeld Institute of Immunology and Experimental Therapy, Weigla 12, PL-53-114, Wrocław
| | - Joanna Wietrzyk
- Department of Experimental Oncology, Polish Academy of Sciences, Ludwik Hirszfeld Institute of Immunology and Experimental Therapy, Weigla 12, PL-53-114, Wrocław
| | - Antoni Szumny
- Department of Chemistry, Wroclaw University of Environmental and Life Sciences, Norwida 25, PL-50-375, Wrocław
| | - Elżbieta Gębarowska
- Department of Plant Protection, Wroclaw University of Environmental and Life Sciences, Grunwaldzka 22A, PL-53-363, Wrocław
| | - Czesław Wawrzeńczyk
- Department of Chemistry, Wroclaw University of Environmental and Life Sciences, Norwida 25, PL-50-375, Wrocław
| |
Collapse
|
13
|
Cheng Z, Lu L, Kennes C, Yu J, Chen J. Treatment of gaseous toluene in three biofilters inoculated with fungi/bacteria: Microbial analysis, performance and starvation response. JOURNAL OF HAZARDOUS MATERIALS 2016; 303:83-93. [PMID: 26513567 DOI: 10.1016/j.jhazmat.2015.10.017] [Citation(s) in RCA: 23] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/28/2015] [Revised: 10/09/2015] [Accepted: 10/09/2015] [Indexed: 06/05/2023]
Abstract
Bacteria and fungi are often utilized for the biodegradation of organic pollutants. This study compared fungal and/or bacterial biofiltration in treating toluene under both steady and unsteady states. Fungal biofilter (F-BF) removed less toluene than both bacterial biofilters (B-BF) and fungal & bacterial biofilters (F&B-BF) (<20% vs >60% vs >90%). The mineralization ratio was also lower in F-BF-levels were 2/3 and 1/2 of those values obtained by the other biofilters. Microbial analysis showed that richer communities were present in B-BF and F&B-BF, and that the Hypocreales genus which Trichoderma viride belongs to was much better represented in F&B-BF. The F&B-BF also supported enhanced robustness after 15-day starvation episodes; 1 day later the performance recovered to 80% of the original removal level. The combination of bacteria and fungi makes biofiltration a good option for VOC treatment including better removal and performance stability versus individual biofilters (bacteria or fungi dominated).
Collapse
Affiliation(s)
- Zhuowei Cheng
- College of Biological and Environmental Engineering, Zhejiang University of Technology, Hangzhou, China
| | - Lichao Lu
- College of Biological and Environmental Engineering, Zhejiang University of Technology, Hangzhou, China
| | - Christian Kennes
- Chemical Engineering Laboratory, Faculty of Science, University of La Coruña, Spain
| | - Jianming Yu
- College of Biological and Environmental Engineering, Zhejiang University of Technology, Hangzhou, China
| | - Jianmeng Chen
- College of Biological and Environmental Engineering, Zhejiang University of Technology, Hangzhou, China.
| |
Collapse
|
14
|
Removal of phenol in phenolic resin wastewater by a novel biomaterial: the Phanerochaete chrysosporium pellet containing chlamydospore-like cells. Appl Microbiol Biotechnol 2016; 100:5153-64. [PMID: 26860939 DOI: 10.1007/s00253-016-7353-7] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/18/2015] [Revised: 01/19/2016] [Accepted: 01/23/2016] [Indexed: 10/22/2022]
Abstract
A novel biomaterial, the Phanerochaete chrysosporium pellet (CP) composed of chlamydospore-like cells (CLCs), was prepared and its potential in treating phenolic resin wastewater was evaluated. CP possesses higher phenol removal ability in contrast with mycelial pellets of P. chrysosporium, and CLC can be seen as the naturally immobilized enzymes. At shake-flask level, the ideal pH value, temperature, and inoculation quantity of CP for treatment of 1430 mg/l phenol wastewater were pH 4-6, 30 °C, and 5.0 g/l, respectively, and the maximum specific removal rate, 41.1 mg phenol/g CP/h, was obtained in fixed bed reactor (FBR) when the flow rate of wastewater was 3.4 l/h. During the treatment, FBR harbored amounts of bacteria (135 genera) and eukaryotes, as analyzed by metagenomic sequencing. Bacterial pollution not only decreased reactor performance but also had a negative impact on reusability of CP. Hot water treatment (80-85 °C) is effective to inhibit bacterial pollution, and heat resistance of CLC makes the repeated regrowing of CP be feasible. This work presents an innovative and low-cost biomaterial for phenol removal and will be helpful for the practical application of P. chrysosporium in wastewater treatment.
Collapse
|
15
|
Chan YS, Mat Don M. Biosynthesis and structural characterization of Ag nanoparticles from white rot fungi. MATERIALS SCIENCE & ENGINEERING. C, MATERIALS FOR BIOLOGICAL APPLICATIONS 2013; 33:282-8. [DOI: 10.1016/j.msec.2012.08.041] [Citation(s) in RCA: 52] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/25/2012] [Revised: 07/12/2012] [Accepted: 08/29/2012] [Indexed: 10/27/2022]
|
16
|
Rene ER, Bernat P, Długoński J, Veiga MC, Kennes C. Use of styrene as sole carbon source by the fungus Exophiala oligosperma: optimization and modeling of biodegradation, pathway elucidation, and cell membrane composition. Appl Biochem Biotechnol 2012; 168:1351-71. [PMID: 22961395 DOI: 10.1007/s12010-012-9862-x] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/01/2012] [Accepted: 08/21/2012] [Indexed: 10/27/2022]
Abstract
Biodegradation of styrene by Exophiala sp. was tested at different initial concentrations (19.3-170.6 mgl(-1)), pH (2.8-8.7), and temperatures (19.8-45.1 °C), for 120 h according to a 2(3) full-factorial central composite design. The specific growth rate (SGR, per hour) and specific styrene utilization rate (SUR, milligrams of styrene per milligram of biomass per hour) values were used as the response variables for optimization purposes. The interactions between concentration and temperature (P=0.022), and pH and temperature (P=0.010) for SGR, and interactions between concentration and temperature (P=0.012) for SUR were found to be statistically significant. The optimal values for achieving high SGR (0.15 h(-1)) and SUR (0.3622 mg styrene mg(-1) biomass h(-1)) were calculated from the regression model equation. Those values are C(o)=89.1 mgl(-1), pH=5.4, and T=31.5 °C for SGR and C(o)=69.2 mgl(-1), pH=5.5, and T=32.4 °C for SUR. It was also observed that the Exophiala strain degrades styrene via phenylacetic acid, involving initial oxidation of the vinyl side chain. Besides, in the presence of styrene, changes in the fatty acids profile were also observed. It is hypothesized that an increasing amount of linoleic acid (18:2) may be involved in the protection of the fungus against toxic substrate.
Collapse
Affiliation(s)
- Eldon R Rene
- Chemical Engineering Laboratory, Faculty of Sciences, University of La Coruña, Rua da Fraga 10, 15008 La Coruña, Spain
| | | | | | | | | |
Collapse
|
17
|
Fungal strains as catalysts for the biotransformation of halolactones by hydrolytic dehalogenation with the dimethylcyclohexane system. Molecules 2012; 17:9741-53. [PMID: 22893020 PMCID: PMC6268817 DOI: 10.3390/molecules17089741] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/26/2012] [Revised: 07/30/2012] [Accepted: 08/01/2012] [Indexed: 11/24/2022] Open
Abstract
Bicyclic chloro-, bromo- and iodo-γ-lactones with dimethylcyclohexane rings were used as substrates for bioconversion by several fungal strains (Fusarium, Botrytis and Beauveria). Most of the selected microorganisms transformed these lactones by hydrolytic dehalogenation into the new compound cis-2-hydroxy-4,6-dimethyl-9-oxabicyclo[4.3.0]- nonan-8-one, mainly the (−)-isomer. When iodo-γ-lactone was used as the substrate, two products were observed: a hydroxy-γ-lactone and an unsaturated lactone. The structures of all substrates and products were established on the basis of their spectral data. The mechanism of dehalogenation of three halolactones was also studied.
Collapse
|
18
|
Wang C, Xi JY, Hu HY, Yao Y. Stimulative effects of ozone on a biofilter treating gaseous chlorobenzene. ENVIRONMENTAL SCIENCE & TECHNOLOGY 2009; 43:9407-12. [PMID: 20000536 DOI: 10.1021/es9019035] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/06/2023]
Abstract
Recalcitrant volatile organic compounds with low biodegradabilities pose challenges for biofiltration technologies. In this study, the effects and mechanism of adding ozone on the performance of a biofilter were investigated. A biofilter treating chlorobenzene was set up and operated continuously for 265 days under different inlet ozone concentrations. Results showed that ozone below 120 mg m(-3) could notably enhance the biofilter performance. The average chlorobenzene removal efficiency increased from 40 to 70% and then to 90% while the inlet ozone concentration rose from 0 to 40 mg m(-3) and 120 mg m(-3). Reducing ozone concentration resulted in a decrease in removal efficiency from 90 to 40%. Further analysis indicated that the thickness and extra-cellular polymer substance content of the biofilm were remarkably reduced while inlet ozone concentration was gradually increased. Meanwhile, the specific surface areas of the filter bed were found to increase from 784 to 820 and 880 m(2) m(-3). A respiratory quinone profile showed that the dominant quinone shifted from ubiquinone-8 to menaquinone-9(H(2)) after ozone was added. This indicated that some Gram-positive bacteria with thick cell wall became the dominant species under ozone compression.
Collapse
Affiliation(s)
- Can Wang
- Environmental Simulation and Pollution Control State Key Joint Laboratory, Department of Environmental Science and Engineering, Tsinghua University, Beijing 100084, PR China
| | | | | | | |
Collapse
|