Synergistic DNA damaging effects of 4-nitroquinoline-1-oxide and non-effective concentrations of methyl methanesulfonate in human fibroblasts

Performance of the comet assay in a high-throughput version

The high-throughput comet assay was developed to reduce the processing time and to increase sample-throughput of the assay as described by Tice et al. (RR. Tice, E. Agurell, D. Anderson, B. Burlinson, A. Hartmann, H. Kobayashi, Y. Miyamae, E. Rojas, JC. Ryu, YF. Sasaki. Single cell gel/comet assay: guidelines for in vitro and in vivo genetic toxicology testing, Environ. Mol. Mutagen.35 (2000) 206-221). This high-throughput version allows for the processing of up to 400 samples per day. The basis of the new assay is a 96-well plate (multichamber plate, MCP) suitable for electrophoresis. After exposure of the cells to genotoxic agents, the walls of the MCP are separated from the bottom plate. All 96 samples together then go through lysis, alkaline unwinding, electrophoresis, neutralization, and staining. In this study, the first concentration-dependent results obtained with the high-throughput version are shown and a comparison is made with the standard version of the comet assay using five representative chemicals with different genotoxic properties. These genotoxic chemicals are methyl methanesulfonate (MMS) and ethylnitrosourea, which form small alkylation adducts, 4-nitroquinoline-1-oxide for bulky adducts, cisplatin for DNA cross-links, and H(2)O(2) for direct DNA breakage. For medium and high effective concentrations a standard deviation of 3-20% for three replicates (25 comets per sample) was determined. A comparison of the standard assay with the high-throughput version revealed similar results for MMS and H(2)O(2). The integrated viability assay (FDA assay), which was performed after chemical treatment and before detachment of the bottom from the walls of the MCP, did not influence the outcome of the comet formation. In conclusion, the high-throughput version of the comet assay facilitates the determination of genotoxicity in cases where large numbers of samples have to be measured, such as during testing of industrial chemicals, biomonitoring of environmental samples, and early screening of drug candidates for genotoxicity/photogenotoxicity. For such applications the cost- and time-saving of the high-throughput method provides substantial advantages over the standard comet assay.

Differential incorporation of halogenated deoxyuridines during UV-induced DNA repair synthesis in human cells

Double labeling of interphase and metaphase chromosomes by 5-chlorodeoxyuridine (CldU) and 5-iododeoxyuridine (IdU) has been used in studies of the dynamics of DNA replication. Here, we have used this approach and confocal microscopy to analyze sites of DNA repair synthesis during nucleotide excision repair (NER) in quiescent human fibroblasts. Surprisingly, we have found that when both precursors are added at the same time to UV-irradiated cells they label different sites in the nucleus. In contrast, even very short periods of simultaneous IdU+CldU labeling of S-phase cells produced mostly overlapped IdU and CldU replication foci. The differential labeling of repair sites might be due to compartmentalization of I-dUTP and Cl-dUTP pools, or to differential utilization of these thymidine analogs by DNA polymerases delta and epsilon (Poldelta and Polepsilon). To explore the latter possibility we used purified mammalian polymerases to find that I-dUTP is efficiently utilized by both Poldelta and Polepsilon. However, we found that the UV-induced incorporation of IdU was more strongly stimulated by treatment of cells with hydroxyurea than was incorporation of CldU. This indicates that there may be distinct IdU and CldU-derived nucleotide pools differentially affected by inhibition of the ribonucleotide reductase pathway of dNTP synthesis and that is consistent with the view that differential incorporation of IdU and CldU during NER may be caused by compartmentalization of IdU- and CldU-derived nucleotide pools.

10 years after rio-concepts on the contribution of chemistry to a sustainable development

The principles of the United Nations Conference on Environment and Development (UNCED), held in June 1992 in Rio de Janeiro, and Agenda 21, the comprehensive plan of action for the 21st century, adopted 10 years ago by more than 170 governments, address the pressing problems of today and also aim at preparing the world for the challenges of this century. The conservation and management of resources for development are the main focus of interest, to which the sciences will have to make a considerable contribution. Natural, economic, and social sciences will have to be integrated in order to achieve this aim. In their future programs, the associations of the chemical industries in Europe, Japan, and the USA have explicitly accepted their obligation to foster a sustainable development. In this review we investigate innovations in chemistry exemplarily for such a development with regard to their ecological, economical, and social dimensions from an integrated and interdisciplinary perspective. Since base chemicals are produced in large quantities and important product lines are synthesized from them, their resource-saving production is especially important for a sustainable development. This concept has been shown, amongst others, by the example of the syntheses of propylene oxide and adipic acid. In the long run, renewable resources that are catalytically processed could replace fossil raw materials. Separation methods existing today must be improved considerably to lower material and energy consumption. Chemistry might become the pioneer of an innovative energy technique. The design of chemical products should make possible a sustainable processing and recycling and should prevent their bio-accumulation. Methods and criteria to assess their contribution to a sustainable development are necessary. The time taken to introduce the new more sustainable processes and products has to be diminished by linking their development with operational innovation management and with efficient environmental-political control procedures.