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Krutin DV, Zakharov AS, Tupikina EY, Mulloyarova VV. Unveiling the electronic structure peculiarities of phosphine selenides as NMR probes for non-covalent interactions: an experimental and theoretical study. Phys Chem Chem Phys 2024. [PMID: 39023050 DOI: 10.1039/d4cp01191k] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 07/20/2024]
Abstract
In this work, R3PSe (R = Me, Et, n-Bu, t-Bu and Ph) were studied experimentally using NMR spectroscopy in solution and the solid-state in combinaton with quantum chemical methods. The study shows that the NMR parameters of these phosphine selenides, such as δP, δSe, and 1JPSe, are sensitive to subtle changes in the electronic environment of the P and Se atoms. Consequently, phosphine selenides R3PSe can serve as promising spectral probes for the detection and quantitative investigation of various non-covalent interactions. Additionally, the variations of R in phosphine selenides influence the observed NMR spectral parameters, primarily through effects such as π-backdonation and hyperconjugation, which have been observed experimentally and confirmed theoretically.
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Affiliation(s)
- Danil V Krutin
- Institute of Chemistry, St. Petersburg State University, St. Petersburg, Russia.
| | - Anton S Zakharov
- Institute of Chemistry, St. Petersburg State University, St. Petersburg, Russia.
| | - Elena Yu Tupikina
- Institute of Chemistry, St. Petersburg State University, St. Petersburg, Russia.
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2
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Rusakova IL, Rusakov YY. Correlated ab initio calculations of one-bond 31 P 77 Se and 31 P 125 Te spin-spin coupling constants in a series of PSe and PTe systems accounting for relativistic effects (part 2). MAGNETIC RESONANCE IN CHEMISTRY : MRC 2020; 58:929-940. [PMID: 32453871 DOI: 10.1002/mrc.5058] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/27/2020] [Revised: 04/19/2020] [Accepted: 05/20/2020] [Indexed: 06/11/2023]
Abstract
Synthetic chalcogen-phosphorus chemistry permanently makes new challenges to computational Nuclear Magnetic Resonance (NMR) spectroscopy, which has proven to be a powerful tool of structural analysis of chalcogen-phosphorus compounds. This paper reports on the calculations of one-bond 31 P77 Se and 31 P125 Te NMR spin-spin coupling constants (SSCCs) in the series of phosphine selenides and tellurides. The applicability of the combined computational approach to the one-bond 31 P77 Se and 31 P125 Te SSCCs, incorporating the composite nonrelativistic scheme, built of high-accuracy correlated SOPPA (CC2) and Coupled Cluster Single and Double (CCSD) methods and the Density Functional Theory (DFT) relativistic corrections (four-component level), was examined against the experiment and another scheme based on the four-component relativistic DFT method. A special J-oriented basis set (acv3z-J) for selenium and tellurium atoms, developed previously by the authors, was used throughout the NMR calculations in this work at the first time. The proposed computational methodologies (combined and 'pure') provided a reasonable accuracy for 31 P77 Se and 31 P125 Te SSCCs against experimental data, characterizing by the mean absolute percentage errors of about 4% and 1%, and 12% and 8% for selenium and tellurium species, respectively. The present study reports typical relativistic corrections to 77 Se31 P and 125 Te31 P SSCCs, calculated within the four-component DFT formalism for a broad series of tertiary phosphine selenides and tellurides with different substituents at phosphorus.
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Affiliation(s)
- Irina L Rusakova
- A. E. Favorsky Irkutsk Institute of Chemistry, Siberian Branch of the Russian Academy of Sciences, Favorsky St. 1, Irkutsk, 664033, Russia
| | - Yuriy Yu Rusakov
- A. E. Favorsky Irkutsk Institute of Chemistry, Siberian Branch of the Russian Academy of Sciences, Favorsky St. 1, Irkutsk, 664033, Russia
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4
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Viger-Gravel J, Meyer JE, Korobkov I, Bryce DL. Probing halogen bonds with solid-state NMR spectroscopy: observation and interpretation of J(77Se,31P) coupling in halogen-bonded PSe⋯I motifs. CrystEngComm 2014. [DOI: 10.1039/c4ce00345d] [Citation(s) in RCA: 43] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/01/2023]
Abstract
Intra-halogen bond J couplings measured via NMR spectroscopy and interpreted using natural localized molecular orbitals offer novel insights into this class of non-covalent interaction.
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Affiliation(s)
- Jasmine Viger-Gravel
- Department of Chemistry and Center for Catalysis Research and Innovation
- University of Ottawa
- Ottawa, Canada
| | - Julia E. Meyer
- Department of Chemistry and Center for Catalysis Research and Innovation
- University of Ottawa
- Ottawa, Canada
| | - Ilia Korobkov
- Department of Chemistry and Center for Catalysis Research and Innovation
- University of Ottawa
- Ottawa, Canada
| | - David L. Bryce
- Department of Chemistry and Center for Catalysis Research and Innovation
- University of Ottawa
- Ottawa, Canada
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5
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Sutrisno A, Lo AY, Tang JA, Dutton JL, Farrar GJ, Ragogna PJ, Zheng S, Autschbach J, Schurko RW. Experimental and theoretical investigations of selenium nuclear magnetic shielding tensors in Se–N heterocycles. CAN J CHEM 2009. [DOI: 10.1139/v09-100] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
Abstract
A preliminary study involving solid-state 77Se NMR spectroscopy and first principles calculations of 77Se NMR parameters in Se–N heterocycles is reported. 77Se CP/MAS NMR spectra of the ring systems reveal expansive selenium chemical shift (CS) tensors, which are extremely sensitive to molecular geometry, symmetry, ligand substitution, and intermolecular contacts. For systems with known crystal structures, hybrid density functional theory (DFT) calculations of selenium nuclear magnetic shielding (NMS) tensors were carried out, and tensor orientations in the molecular frames examined. Additional DFT calculations of selenium NMS tensors are presented, along with a detailed analysis of pairs of occupied and virtual molecular orbitals that give rise to the Se NMS tensors. A new naturalized local molecular orbital (NLMO) analysis under the same DFT framework is also discussed. Collectively, the NMR data and first principles calculations provide understanding of the influences of electronic structure, bonding, and intermolecular interactions on the selenium NMS tensors, allowing for (i) prediction of unknown molecular structures and (ii) insight into the positions of the stereochemically active selenium lone pairs.
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Affiliation(s)
- Andre Sutrisno
- Department of Chemistry and Biochemistry, University of Windsor, Windsor, ON N9B 3P4, Canada
- Department of Chemistry, The University of Western Ontario, London, ON N6A 5B7, Canada
- Department of Chemistry, The State University of New York, Buffalo, NY 14260-3000, USA
| | - Andy Y.H. Lo
- Department of Chemistry and Biochemistry, University of Windsor, Windsor, ON N9B 3P4, Canada
- Department of Chemistry, The University of Western Ontario, London, ON N6A 5B7, Canada
- Department of Chemistry, The State University of New York, Buffalo, NY 14260-3000, USA
| | - Joel A. Tang
- Department of Chemistry and Biochemistry, University of Windsor, Windsor, ON N9B 3P4, Canada
- Department of Chemistry, The University of Western Ontario, London, ON N6A 5B7, Canada
- Department of Chemistry, The State University of New York, Buffalo, NY 14260-3000, USA
| | - Jason L. Dutton
- Department of Chemistry and Biochemistry, University of Windsor, Windsor, ON N9B 3P4, Canada
- Department of Chemistry, The University of Western Ontario, London, ON N6A 5B7, Canada
- Department of Chemistry, The State University of New York, Buffalo, NY 14260-3000, USA
| | - Gregg J. Farrar
- Department of Chemistry and Biochemistry, University of Windsor, Windsor, ON N9B 3P4, Canada
- Department of Chemistry, The University of Western Ontario, London, ON N6A 5B7, Canada
- Department of Chemistry, The State University of New York, Buffalo, NY 14260-3000, USA
| | - Paul J. Ragogna
- Department of Chemistry and Biochemistry, University of Windsor, Windsor, ON N9B 3P4, Canada
- Department of Chemistry, The University of Western Ontario, London, ON N6A 5B7, Canada
- Department of Chemistry, The State University of New York, Buffalo, NY 14260-3000, USA
| | - Shaohui Zheng
- Department of Chemistry and Biochemistry, University of Windsor, Windsor, ON N9B 3P4, Canada
- Department of Chemistry, The University of Western Ontario, London, ON N6A 5B7, Canada
- Department of Chemistry, The State University of New York, Buffalo, NY 14260-3000, USA
| | - Jochen Autschbach
- Department of Chemistry and Biochemistry, University of Windsor, Windsor, ON N9B 3P4, Canada
- Department of Chemistry, The University of Western Ontario, London, ON N6A 5B7, Canada
- Department of Chemistry, The State University of New York, Buffalo, NY 14260-3000, USA
| | - Robert W. Schurko
- Department of Chemistry and Biochemistry, University of Windsor, Windsor, ON N9B 3P4, Canada
- Department of Chemistry, The University of Western Ontario, London, ON N6A 5B7, Canada
- Department of Chemistry, The State University of New York, Buffalo, NY 14260-3000, USA
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Demko BA, Wasylishen RE. Comparing Main Group and Transition-Metal Square-Planar Complexes of the Diselenoimidodiphosphinate Anion: A Solid-State NMR Investigation of M[N(iPr2PSe)2]2 (M = Se, Te; Pd, Pt). Inorg Chem 2008; 47:2786-97. [DOI: 10.1021/ic7019999] [Citation(s) in RCA: 20] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Bryan A. Demko
- Department of Chemistry, Gunning/Lemieux Chemistry Centre, University of Alberta, Edmonton, AB T6G 2G2, Canada
| | - Roderick E. Wasylishen
- Department of Chemistry, Gunning/Lemieux Chemistry Centre, University of Alberta, Edmonton, AB T6G 2G2, Canada
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Gajda J, Pacholczyk J, Bujacz A, Bartoszak-Adamska E, Bujacz G, Ciesielski W, Potrzebowski MJ. Structure and Dynamics of L-Selenomethionine in the Solid State. J Phys Chem B 2006; 110:25692-701. [PMID: 17181208 DOI: 10.1021/jp063332k] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
L-selenomethionine 1 crystallizes in P2(1) space group with two molecules in the asymmetric unit. Solid-state NMR spectroscopy is used for searching of structure and dynamics of 1 in the crystal lattice. The distinct molecular motion of side chains for A and B molecules of 1 is apparent from measurements of relaxation parameters (1H 1rho, 13C T1) and analysis of CSA data (2D-PASS experiment). The 13C delta(ii) and 77Se delta(ii) parameters are correlated with theoretical shielding parameters obtained by means DFT GIAO calculations. Attempt to explain the mechanism of phase transition of crystals of 1 at 313K is presented.
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Affiliation(s)
- Jaroslaw Gajda
- Centre of Molecular and Macromolecular Studies, Polish Academy of Sciences, Sienkiewicza 112, 90-363 Łódz, Poland
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9
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Demko BA, Eichele K, Wasylishen RE. A Combined Experimental and Quantum Chemistry Study of Selenium Chemical Shift Tensors. J Phys Chem A 2006; 110:13537-50. [PMID: 17165881 DOI: 10.1021/jp064543s] [Citation(s) in RCA: 32] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
A comprehensive investigation of selenium chemical shift tensors is presented. Experimentally determined chemical shift tensors were obtained from solid-state 77Se NMR spectra for several organic, organometallic, or inorganic selenium-containing compounds. The first reported indirect spin-spin coupling between selenium and chlorine is observed for Ph(2)SeCl(2) where 1J(77Se,35Cl)iso is 110 Hz. Selenium magnetic shielding tensors were calculated for all of the molecules investigated using zeroth-order regular approximation density functional theory, ZORA DFT. The computations provide the orientations of the chemical shift tensors, as well as a test of the theory for calculating the magnetic shielding interaction for heavier elements. The ZORA DFT calculations were performed with nonrelativistic, scalar relativistic, and scalar with spin-orbit relativistic levels of theory. Relativistic contributions to the magnetic shielding tensor were found to be significant for (NH4)2WSe4 and of less importance for organoselenium, organophosphine selenide, and inorganic selenium compounds containing lighter elements.
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Affiliation(s)
- Bryan A Demko
- Department of Chemistry, Gunning/Lemieux Chemistry Centre, University of Alberta, Edmonton, AB, T6G 2G2 Canada
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Kaski J, Lantto P, Rantala TT, Schroderus J, Vaara J, Jokisaari J. Experimental and Theoretical Study of the Spin−Spin Coupling Tensors in Methylsilane. J Phys Chem A 1999. [DOI: 10.1021/jp9920491] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Jaakko Kaski
- Department of Physical Sciences, University of Oulu, P.O. Box 3000, FIN-90401 Oulu, Finland
| | - Perttu Lantto
- Department of Physical Sciences, University of Oulu, P.O. Box 3000, FIN-90401 Oulu, Finland
| | - Tapio T. Rantala
- Department of Physical Sciences, University of Oulu, P.O. Box 3000, FIN-90401 Oulu, Finland
| | - Jyrki Schroderus
- Department of Physical Sciences, University of Oulu, P.O. Box 3000, FIN-90401 Oulu, Finland
| | - Juha Vaara
- Department of Physical Sciences, University of Oulu, P.O. Box 3000, FIN-90401 Oulu, Finland
| | - Jukka Jokisaari
- Department of Physical Sciences, University of Oulu, P.O. Box 3000, FIN-90401 Oulu, Finland
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