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For: Sträter N, Schnappauf G, Braus G, Lipscomb WN. Mechanisms of catalysis and allosteric regulation of yeast chorismate mutase from crystal structures. Structure 1997;5:1437-52. [PMID: 9384560 DOI: 10.1016/s0969-2126(97)00294-3] [Citation(s) in RCA: 77] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/05/2023]
Number Cited by Other Article(s)
1
Amala M, Nagarajan H, Ahila M, Nachiappan M, Veerapandiyan M, Vetrivel U, Jeyakanthan J. Unveiling the intricacies of allosteric regulation in aspartate kinase from the Wolbachia endosymbiont of Brugia Malayi: Mechanistic and therapeutic insights. Int J Biol Macromol 2024;267:131326. [PMID: 38569988 DOI: 10.1016/j.ijbiomac.2024.131326] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/10/2023] [Revised: 03/04/2024] [Accepted: 03/31/2024] [Indexed: 04/05/2024]
2
Stocker C, Khatanbaatar T, Bressan L, Würth-Roderer K, Cordara G, Krengel U, Kast P. Novel exported fusion enzymes with chorismate mutase and cyclohexadienyl dehydratase activity: Shikimate pathway enzymes teamed up in no man's land. J Biol Chem 2023;299:105161. [PMID: 37586588 PMCID: PMC10520331 DOI: 10.1016/j.jbc.2023.105161] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/12/2023] [Revised: 07/29/2023] [Accepted: 08/11/2023] [Indexed: 08/18/2023]  Open
3
Sapienza PJ, Bonin JP, Jinasena HD, Li K, Dieckhaus H, Popov KI, Aubé J, Lee AL. Mixed, nonclassical behavior in a classic allosteric protein. Proc Natl Acad Sci U S A 2023;120:e2308338120. [PMID: 37695919 PMCID: PMC10515163 DOI: 10.1073/pnas.2308338120] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/18/2023] [Accepted: 07/27/2023] [Indexed: 09/13/2023]  Open
4
Thorbjørnsrud H, Bressan L, Khatanbaatar T, Carrer M, Würth-Roderer K, Cordara G, Kast P, Cascella M, Krengel U. What Drives Chorismate Mutase to Top Performance? Insights from a Combined In Silico and In Vitro Study. Biochemistry 2023;62:782-796. [PMID: 36705397 PMCID: PMC9910054 DOI: 10.1021/acs.biochem.2c00635] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/28/2023]
5
Nussinov R, Zhang M, Maloney R, Liu Y, Tsai CJ, Jang H. Allostery: Allosteric Cancer Drivers and Innovative Allosteric Drugs. J Mol Biol 2022;434:167569. [PMID: 35378118 PMCID: PMC9398924 DOI: 10.1016/j.jmb.2022.167569] [Citation(s) in RCA: 26] [Impact Index Per Article: 13.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/03/2022] [Revised: 03/11/2022] [Accepted: 03/25/2022] [Indexed: 01/12/2023]
6
Winston DS, Gorman SD, Boehr DD. Conformational transitions in yeast chorismate mutase important for allosteric regulation as identified by nuclear magnetic resonance spectroscopy. J Mol Biol 2022;434:167531. [DOI: 10.1016/j.jmb.2022.167531] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/30/2021] [Revised: 02/18/2022] [Accepted: 03/02/2022] [Indexed: 11/28/2022]
7
Wu N, Strömich L, Yaliraki SN. Prediction of allosteric sites and signaling: Insights from benchmarking datasets. PATTERNS (NEW YORK, N.Y.) 2022;3:100408. [PMID: 35079717 PMCID: PMC8767309 DOI: 10.1016/j.patter.2021.100408] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 08/18/2021] [Revised: 09/06/2021] [Accepted: 11/15/2021] [Indexed: 12/12/2022]
8
Sapienza PJ, Currie MM, Lancaster NM, Li K, Aubé J, Goldfarb D, Cloer EW, Major MB, Lee AL. Visualizing an Allosteric Intermediate Using CuAAC Stabilization of an NMR Mixed Labeled Dimer. ACS Chem Biol 2021;16:2766-2775. [PMID: 34784173 DOI: 10.1021/acschembio.1c00617] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
9
Aydin A, Kurt F, Hürkan K. Key aromatic amino acid players in soybean (Glycine max) genome under drought and salt stresses. BIOCATALYSIS AND AGRICULTURAL BIOTECHNOLOGY 2021. [DOI: 10.1016/j.bcab.2021.102094] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
10
Molecular targets for antifungals in amino acid and protein biosynthetic pathways. Amino Acids 2021;53:961-991. [PMID: 34081205 PMCID: PMC8241756 DOI: 10.1007/s00726-021-03007-6] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/01/2021] [Accepted: 05/17/2021] [Indexed: 01/22/2023]
11
Baseggio L, Silayeva O, Buller N, Landos M, Englestädter J, Barnes AC. Complete, closed and curated genome sequences of Photobacterium damselae subsp. piscicida isolates from Australia indicate mobilome-driven localized evolution and novel pathogenicity determinants. Microb Genom 2021;7:000562. [PMID: 33885359 PMCID: PMC8208687 DOI: 10.1099/mgen.0.000562] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]  Open
12
Computational investigations of allostery in aromatic amino acid biosynthetic enzymes. Biochem Soc Trans 2021;49:415-429. [PMID: 33544132 DOI: 10.1042/bst20200741] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/25/2020] [Revised: 01/14/2021] [Accepted: 01/15/2021] [Indexed: 12/22/2022]
13
Fahrig-Kamarauskait J, Würth-Roderer K, Thorbjørnsrud HV, Mailand S, Krengel U, Kast P. Evolving the naturally compromised chorismate mutase from Mycobacterium tuberculosis to top performance. J Biol Chem 2020;295:17514-17534. [PMID: 33453995 PMCID: PMC7762937 DOI: 10.1074/jbc.ra120.014924] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/22/2020] [Revised: 10/08/2020] [Indexed: 11/06/2022]  Open
14
Gorman SD, Winston DS, Sahu D, Boehr DD. Different Solvent and Conformational Entropy Contributions to the Allosteric Activation and Inhibition Mechanisms of Yeast Chorismate Mutase. Biochemistry 2020;59:2528-2540. [DOI: 10.1021/acs.biochem.0c00277] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
15
Gorman SD, Boehr DD. Energy and Enzyme Activity Landscapes of Yeast Chorismate Mutase at Cellular Concentrations of Allosteric Effectors. Biochemistry 2019;58:4058-4069. [DOI: 10.1021/acs.biochem.9b00721] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/08/2023]
16
Han X, Altegoer F, Steinchen W, Binnebesel L, Schuhmacher J, Glatter T, Giammarinaro PI, Djamei A, Rensing SA, Reissmann S, Kahmann R, Bange G. A kiwellin disarms the metabolic activity of a secreted fungal virulence factor. Nature 2019;565:650-653. [PMID: 30651637 DOI: 10.1038/s41586-018-0857-9] [Citation(s) in RCA: 40] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/01/2018] [Accepted: 12/04/2018] [Indexed: 01/01/2023]
17
Gorman SD, Sahu D, O'Rourke KF, Boehr DD. Assigning methyl resonances for protein solution-state NMR studies. Methods 2018;148:88-99. [PMID: 29958930 DOI: 10.1016/j.ymeth.2018.06.010] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/25/2018] [Revised: 06/16/2018] [Accepted: 06/18/2018] [Indexed: 10/28/2022]  Open
18
Rational Discovery of (+) (S) Abscisic Acid as a Potential Antifungal Agent: a Repurposing Approach. Sci Rep 2018;8:8565. [PMID: 29867091 PMCID: PMC5986790 DOI: 10.1038/s41598-018-26998-x] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/02/2018] [Accepted: 05/14/2018] [Indexed: 12/20/2022]  Open
19
Evolution of allosteric regulation in chorismate mutases from early plants. Biochem J 2017;474:3705-3717. [DOI: 10.1042/bcj20170549] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/07/2017] [Revised: 09/25/2017] [Accepted: 09/26/2017] [Indexed: 11/17/2022]
20
Mycobacterium tuberculosis chorismate mutase: A potential target for TB. Bioorg Med Chem 2017;25:1725-1736. [PMID: 28202315 DOI: 10.1016/j.bmc.2017.02.001] [Citation(s) in RCA: 28] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/18/2016] [Accepted: 02/01/2017] [Indexed: 12/27/2022]
21
Basson A. Nutrition management in the adult patient with Crohn’s disease. SOUTH AFRICAN JOURNAL OF CLINICAL NUTRITION 2016. [DOI: 10.1080/16070658.2012.11734423] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/08/2023]
22
Remote Control by Inter-Enzyme Allostery: A Novel Paradigm for Regulation of the Shikimate Pathway. J Mol Biol 2016;428:1237-1255. [DOI: 10.1016/j.jmb.2016.01.001] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/22/2015] [Revised: 12/22/2015] [Accepted: 01/02/2016] [Indexed: 11/16/2022]
23
Sasse A, Hamer SN, Amich J, Binder J, Krappmann S. Mutant characterization and in vivo conditional repression identify aromatic amino acid biosynthesis to be essential for Aspergillus fumigatus virulence. Virulence 2015;7:56-62. [PMID: 26605426 PMCID: PMC4871646 DOI: 10.1080/21505594.2015.1109766] [Citation(s) in RCA: 24] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/18/2014] [Revised: 10/07/2015] [Accepted: 10/12/2015] [Indexed: 10/22/2022]  Open
24
Pérez E, Rubio MB, Cardoza RE, Gutiérrez S, Bettiol W, Monte E, Hermosa R. The importance of chorismate mutase in the biocontrol potential of Trichoderma parareesei. Front Microbiol 2015;6:1181. [PMID: 26579090 PMCID: PMC4621298 DOI: 10.3389/fmicb.2015.01181] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/29/2015] [Accepted: 10/12/2015] [Indexed: 11/20/2022]  Open
25
Electrostatic transition state stabilization rather than reactant destabilization provides the chemical basis for efficient chorismate mutase catalysis. Proc Natl Acad Sci U S A 2014;111:17516-21. [PMID: 25422475 DOI: 10.1073/pnas.1408512111] [Citation(s) in RCA: 24] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]  Open
26
Westfall CS, Xu A, Jez JM. Structural evolution of differential amino acid effector regulation in plant chorismate mutases. J Biol Chem 2014;289:28619-28. [PMID: 25160622 DOI: 10.1074/jbc.m114.591123] [Citation(s) in RCA: 34] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/21/2023]  Open
27
Zhang S, Huang T, Ilangovan U, Hinck AP, Fitzpatrick PF. The solution structure of the regulatory domain of tyrosine hydroxylase. J Mol Biol 2013;426:1483-97. [PMID: 24361276 DOI: 10.1016/j.jmb.2013.12.015] [Citation(s) in RCA: 39] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/17/2013] [Revised: 11/13/2013] [Accepted: 12/10/2013] [Indexed: 11/19/2022]
28
Kim HJ, Ruszczycky MW, Liu HW. Current developments and challenges in the search for a naturally selected Diels-Alderase. Curr Opin Chem Biol 2012;16:124-31. [PMID: 22260931 DOI: 10.1016/j.cbpa.2011.12.017] [Citation(s) in RCA: 58] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/30/2011] [Revised: 12/21/2011] [Accepted: 12/23/2011] [Indexed: 11/27/2022]
29
Cherrad S, Girard V, Dieryckx C, Gonçalves IR, Dupuy JW, Bonneu M, Rascle C, Job C, Job D, Vacher S, Poussereau N. Proteomic analysis of proteins secreted by Botrytis cinerea in response to heavy metal toxicity. Metallomics 2012;4:835-46. [DOI: 10.1039/c2mt20041d] [Citation(s) in RCA: 34] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/08/2023]
30
Manalil NS, Junior Te'o VS, Braithwaite K, Brumbley S, Samson P, Nevalainen KMH. A proteomic view into infection of greyback canegrubs (Dermolepida albohirtum) by Metarhizium anisopliae. Curr Genet 2009;55:571-81. [PMID: 19730866 DOI: 10.1007/s00294-009-0270-x] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/01/2009] [Revised: 08/12/2009] [Accepted: 08/13/2009] [Indexed: 12/23/2022]
31
RANAGHAN KARAE, RIDDER LARS, SZEFCZYK BORYS, SOKALSKI WANDRZEJ, HERMANN JOHANNESC, MULHOLLAND ADRIANJ. Insights into enzyme catalysis from QM/MM modelling: transition state stabilization in chorismate mutase. Mol Phys 2009. [DOI: 10.1080/00268970310001593286] [Citation(s) in RCA: 48] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/27/2022]
32
Sciabola S, Stanton RV, Mills JE, Flocco MM, Baroni M, Cruciani G, Perruccio F, Mason JS. High-Throughput Virtual Screening of Proteins Using GRID Molecular Interaction Fields. J Chem Inf Model 2009;50:155-69. [DOI: 10.1021/ci9003317] [Citation(s) in RCA: 69] [Impact Index Per Article: 4.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
33
Li PP, Liu YJ, Liu SJ. Genetic and biochemical identification of the chorismate mutase from Corynebacterium glutamicum. Microbiology (Reading) 2009;155:3382-3391. [DOI: 10.1099/mic.0.029819-0] [Citation(s) in RCA: 13] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]  Open
34
Ökvist M, Sasso S, Roderer K, Kast P, Krengel U. A novel noncovalent complex of chorismate mutase and DAHP synthase from Mycobacterium tuberculosis: protein purification, crystallization and X-ray diffraction analysis. Acta Crystallogr Sect F Struct Biol Cryst Commun 2009;65:1048-52. [PMID: 19851019 PMCID: PMC2765898 DOI: 10.1107/s1744309109035878] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/16/2009] [Accepted: 09/04/2009] [Indexed: 11/10/2022]
35
Schulzke JD, Ploeger S, Amasheh M, Fromm A, Zeissig S, Troeger H, Richter J, Bojarski C, Schumann M, Fromm M. Epithelial tight junctions in intestinal inflammation. Ann N Y Acad Sci 2009;1165:294-300. [PMID: 19538319 DOI: 10.1111/j.1749-6632.2009.04062.x] [Citation(s) in RCA: 289] [Impact Index Per Article: 19.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]
36
Sasso S, Okvist M, Roderer K, Gamper M, Codoni G, Krengel U, Kast P. Structure and function of a complex between chorismate mutase and DAHP synthase: efficiency boost for the junior partner. EMBO J 2009;28:2128-42. [PMID: 19556970 DOI: 10.1038/emboj.2009.165] [Citation(s) in RCA: 42] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/09/2009] [Accepted: 05/26/2009] [Indexed: 11/09/2022]  Open
37
Lu SW, Tian D, Borchardt-Wier HB, Wang X. Alternative splicing: A novel mechanism of regulation identified in the chorismate mutase gene of the potato cyst nematode Globodera rostochiensis. Mol Biochem Parasitol 2008;162:1-15. [DOI: 10.1016/j.molbiopara.2008.06.002] [Citation(s) in RCA: 36] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/17/2007] [Revised: 05/13/2008] [Accepted: 06/03/2008] [Indexed: 11/25/2022]
38
Deville J, Rey J, Chabbert M. Comprehensive analysis of the helix-X-helix motif in soluble proteins. Proteins 2008;72:115-35. [PMID: 18214950 DOI: 10.1002/prot.21879] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
39
Tan K, Li H, Zhang R, Gu M, Clancy ST, Joachimiak A. Structures of open (R) and close (T) states of prephenate dehydratase (PDT)--implication of allosteric regulation by L-phenylalanine. J Struct Biol 2007;162:94-107. [PMID: 18171624 DOI: 10.1016/j.jsb.2007.11.009] [Citation(s) in RCA: 28] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/05/2007] [Revised: 11/05/2007] [Accepted: 11/09/2007] [Indexed: 11/29/2022]
40
O’Boyle NM, Holliday GL, Almonacid DE, Mitchell JB. Using reaction mechanism to measure enzyme similarity. J Mol Biol 2007;368:1484-99. [PMID: 17400244 PMCID: PMC3461574 DOI: 10.1016/j.jmb.2007.02.065] [Citation(s) in RCA: 32] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/30/2006] [Revised: 11/06/2006] [Accepted: 02/19/2007] [Indexed: 11/24/2022]
41
Kim SK, Reddy SK, Nelson BC, Vasquez GB, Davis A, Howard AJ, Patterson S, Gilliland GL, Ladner JE, Reddy PT. Biochemical and structural characterization of the secreted chorismate mutase (Rv1885c) from Mycobacterium tuberculosis H37Rv: an *AroQ enzyme not regulated by the aromatic amino acids. J Bacteriol 2007;188:8638-48. [PMID: 17146044 PMCID: PMC1698256 DOI: 10.1128/jb.00441-06] [Citation(s) in RCA: 38] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]  Open
42
Cowie RM, Turega SM, Philp D. Probing the Limits of Rate Acceleration Mediated by Hydrogen Bonds. Org Lett 2006;8:5179-82. [PMID: 17078672 DOI: 10.1021/ol061290c] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
43
Rekha N, Machado SM, Narayanan C, Krupa A, Srinivasan N. Interaction interfaces of protein domains are not topologically equivalent across families within superfamilies: Implications for metabolic and signaling pathways. Proteins 2006;58:339-53. [PMID: 15562516 DOI: 10.1002/prot.20319] [Citation(s) in RCA: 27] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
44
Krengel U, Dey R, Sasso S, Okvist M, Ramakrishnan C, Kast P. Preliminary X-ray crystallographic analysis of the secreted chorismate mutase from Mycobacterium tuberculosis: a tricky crystallization problem solved. Acta Crystallogr Sect F Struct Biol Cryst Commun 2006;62:441-5. [PMID: 16682771 PMCID: PMC2219981 DOI: 10.1107/s1744309106012036] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/05/2005] [Accepted: 04/03/2006] [Indexed: 11/10/2022]
45
Okvist M, Dey R, Sasso S, Grahn E, Kast P, Krengel U. 1.6 A crystal structure of the secreted chorismate mutase from Mycobacterium tuberculosis: novel fold topology revealed. J Mol Biol 2006;357:1483-99. [PMID: 16499927 DOI: 10.1016/j.jmb.2006.01.069] [Citation(s) in RCA: 38] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/30/2005] [Revised: 01/17/2006] [Accepted: 01/18/2006] [Indexed: 10/25/2022]
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Kong Y, Ma J, Karplus M, Lipscomb WN. The Allosteric Mechanism of Yeast Chorismate Mutase: A Dynamic Analysis. J Mol Biol 2006;356:237-47. [PMID: 16337651 DOI: 10.1016/j.jmb.2005.10.064] [Citation(s) in RCA: 31] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/15/2005] [Revised: 10/20/2005] [Accepted: 10/23/2005] [Indexed: 11/16/2022]
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DeClue MS, Baldridge KK, Kast P, Hilvert D. Experimental and Computational Investigation of the Uncatalyzed Rearrangement and Elimination Reactions of Isochorismate. J Am Chem Soc 2006;128:2043-51. [PMID: 16464106 DOI: 10.1021/ja056714x] [Citation(s) in RCA: 26] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
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DeClue MS, Baldridge KK, Künzler DE, Kast P, Hilvert D. Isochorismate Pyruvate Lyase:  A Pericyclic Reaction Mechanism? J Am Chem Soc 2005;127:15002-3. [PMID: 16248620 DOI: 10.1021/ja055871t] [Citation(s) in RCA: 66] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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Vamvaca K, Butz M, Walter KU, Taylor SV, Hilvert D. Simultaneous optimization of enzyme activity and quaternary structure by directed evolution. Protein Sci 2005;14:2103-14. [PMID: 15987889 PMCID: PMC2279322 DOI: 10.1110/ps.051431605] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/25/2022]
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Ming D, Wall ME. Quantifying allosteric effects in proteins. Proteins 2005;59:697-707. [PMID: 15822100 DOI: 10.1002/prot.20440] [Citation(s) in RCA: 76] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
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