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Syryamina VN, Astvatsaturov DA, Dzuba SA, Chumakova NA. Glass-like behavior of intercalated organic solvents in graphite oxide detected by spin-probe EPR. Phys Chem Chem Phys 2023; 25:25720-25727. [PMID: 37721717 DOI: 10.1039/d3cp03253a] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 09/19/2023]
Abstract
Membranes based on graphite oxide (GO) are promising materials for the separation of polar liquids and gases. Understanding the properties of solvents immersed in GO is important for the development of various technological applications. Here, the molecular motions of the TEMPO nitroxide spin probe in acetonitrile intercalated into the GO inter-plane space were studied using electron paramagnetic resonance (EPR), including its pulsed version, and electron spin echo (ESE). For a sample containing 75% acetonitrile relative to equilibrium sorption at room temperature, ESE-detected stochastic librations were observed for TEMPO molecules above 135 K. Since these librations are an inherent property of molecular glasses, this fact indicates that intercalated acetonitrile forms a two-dimensional glass state. Above 225 K, an acceleration of stochastic librations was observed, indicating the manifestation of a glass-like dynamical cross-over. Continuous wave (CW) EPR spectra of TEMPO showed the absence of overall tumbling motions in the entire investigated temperature range of up to 340 K, indicating that the intercalated acetonitrile does not behave as a bulk liquid (the melting point of acetonitrile is 229 K). Dynamical librations of TEMPO molecules detected by CW EPR were found to accelerate above 240 K.
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Affiliation(s)
- Victoria N Syryamina
- Voevodsky Institute of Chemical Kinetics and Combustion, RAS, Novosibirsk, 630090, Russian Federation.
| | - Dmitry A Astvatsaturov
- N.N. Semenov Federal Research Center for Chemical Physics, Russian Academy of Science, Kosygin St. 4, Moscow, 119991, Russian Federation
- M.V. Lomonosov Moscow State University, Chemistry Department, Leninskiye Gory, 1/3, Moscow, 119991, Russian Federation
| | - Sergei A Dzuba
- Voevodsky Institute of Chemical Kinetics and Combustion, RAS, Novosibirsk, 630090, Russian Federation.
- Department of Physics, Novosibirsk State University, 630090, Novosibirsk, Russian Federation
| | - Natalia A Chumakova
- N.N. Semenov Federal Research Center for Chemical Physics, Russian Academy of Science, Kosygin St. 4, Moscow, 119991, Russian Federation
- M.V. Lomonosov Moscow State University, Chemistry Department, Leninskiye Gory, 1/3, Moscow, 119991, Russian Federation
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Bartucci R, Aloi E. Librational Dynamics of Spin-Labeled Membranes at Cryogenic Temperatures From Echo-Detected ED-EPR Spectra. Front Mol Biosci 2022; 9:923794. [PMID: 35847982 PMCID: PMC9277068 DOI: 10.3389/fmolb.2022.923794] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/19/2022] [Accepted: 05/19/2022] [Indexed: 11/13/2022] Open
Abstract
Methods of electron spin echo of pulse electron paramagnetic resonance (EPR) spectroscopy are increasingly employed to investigate biophysical properties of nitroxide-labeled biosystems at cryogenic temperatures. Two-pulse echo-detected ED-spectra have proven to be valuable tools to describe the librational dynamics in the low-temperature phases of both lipids and proteins in membranes. The motional parameter, α2τC, given by the product of the mean-square angular amplitude, α2, and the rotational correlation time, τC, of the motion, is readily determined from the nitroxide ED-spectra as well as from the W-relaxation rate curves. An independent evaluation of α2 is obtained from the motionally averaged 14N-hyperfine splitting separation in the continuous wave cw-EPR spectra. Finally, the rotational correlation time τC can be estimated by combining ED- and cw-EPR data. In this mini-review, results on the librational dynamics in model and natural membranes are illustrated.
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Affiliation(s)
- Rosa Bartucci
- Department of Chemistry and Chemical Technologies, University of Calabria, Rende (CS), Italy
- *Correspondence: Rosa Bartucci,
| | - Erika Aloi
- Molecular Biophysics Laboratory, Department of Physics, University of Calabria, Rende (CS), Italy
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Aloi E, Bartucci R. Influence of hydration on segmental chain librations and dynamical transition in lipid bilayers. BIOCHIMICA ET BIOPHYSICA ACTA. BIOMEMBRANES 2022; 1864:183805. [PMID: 34662568 DOI: 10.1016/j.bbamem.2021.183805] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/30/2021] [Revised: 09/29/2021] [Accepted: 10/10/2021] [Indexed: 12/23/2022]
Abstract
Continuous wave electron paramagnetic resonance spectroscopy of chain-labeled phospholipids is used to investigate the effects of hydration on the librational oscillations and the dynamical transition of phospholipid membranes in the low-temperature range 120-270 K. Bilayers of dipalmitoylphostatidiycholine (DPPC) spin-labeled at the first acyl chain segments and at the methyl ends and prepared at full, low, and very low hydration are considered. The segmental mean-square angular amplitudes of librations, 〈α2〉, are larger in the bilayer interior than at the polar/apolar interface and larger in the fully and low hydrated than in the very low hydrated membranes. For chain segments at the beginning of the hydrocarbon region, 〈α2〉-values are markedly restricted and temperature independent in DPPC with the lowest water content, whereas they increase with temperature in the low and fully hydrated bilayers, particularly at the highest temperatures. For chain segments at the chain termini, the librational amplitudes increase progressively, first slowly and then more rapidly with temperature in bilayers at any level of hydration. From the temperature dependence of the mean-square librational amplitude, the dynamical transition is detected around 240 K at the polar/apolar interface in fully and low hydrated DPPC and at around 225 K at the inner hydrocarbon region for bilayers at any hydration condition. At the dynamical transition the bilayers cross low energy barriers of activation energy in the range 10-20 kJ/mol. The results highlight biophysical properties of DPPC bilayers at low-temperature and provide evidence of the effects of the hydration on the dynamical transition in bilayers.
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Affiliation(s)
- Erika Aloi
- Department of Physics, Molecular Biophysics Laboratory, University of Calabria, 87036 Rende, (CS), Italy
| | - Rosa Bartucci
- Department of Chemistry and Chemical Technologies, Molecular Biophysics Laboratory, University of Calabria, 87036 Rende, (CS), Italy.
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Aloi E, Bartucci R. Interdigitated lamellar phases in the frozen state: Spin-label CW- and FT-EPR. Biophys Chem 2019; 253:106229. [DOI: 10.1016/j.bpc.2019.106229] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/28/2019] [Revised: 07/18/2019] [Accepted: 07/18/2019] [Indexed: 11/24/2022]
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Aloi E, Guzzi R, Bartucci R. Unsaturated lipid bilayers at cryogenic temperature: librational dynamics of chain-labeled lipids from pulsed and CW-EPR. Phys Chem Chem Phys 2019; 21:18699-18705. [PMID: 31423504 DOI: 10.1039/c9cp03318a] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Fully hydrated bilayers of monounsaturated palmitoyloleoylphosphatidylcholine (POPC) and diunsaturated dioleoylphosphatidylcholine (DOPC) lipids have low main phase transition temperatures (271 K for POPC and 253 K for DOPC). Two-pulse echo detected spectra, combined with continuous wave electron paramagnetic resonance spectroscopy, are employed to study the low-temperature lamellar phases of the POPC and DOPC unsaturated bilayers that are usually studied in the fluid state. Phosphatidylcholine spin-labeled at C-5 and C-16 carbon atom positions along the acyl chain were used and the temperature varied over the range 77-270 K. Segmental chain librational oscillations of small amplitude and with correlation time in the subnanosecond to nanosecond range are found in both membranes. The mean-square angular amplitude, α2, of librations increases with temperature, is larger close to the bilayer midplane than close to the first acyl chain segments, and is larger in diunsaturated than in monounsaturated bilayers. In the inner hydrocarbon region of both lipid matrices, α2 increases first slowly and linearly with temperature and then more rapidly, and a dynamical transition is detected in the range 190-210 K. Compared to dipalmitoylphosphatidylcholine bilayers of fully saturated symmetric chain lipids, the presence of double bonds in the acyl chain enhances the intensity of librational motion which is characterized by larger angular variations at the terminal methyl ends. These findings highlight biophysical properties of unsaturated bilayers in the frozen state, including a detailed characterization of segmental chain dynamics and the evidence of a dynamical transition that appears to be a generic feature in hydrated macromolecular systems. These results can also be relevant in regulating membrane physical properties and function at higher physiological temperatures.
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Affiliation(s)
- Erika Aloi
- Department of Physics, Molecular Biophysics Laboratory, University of Calabria, 87036 Rende, Italy
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Aloi E, Oranges M, Guzzi R, Bartucci R. Low-Temperature Dynamics of Chain-Labeled Lipids in Ester- and Ether-Linked Phosphatidylcholine Membranes. J Phys Chem B 2017; 121:9239-9246. [PMID: 28892381 DOI: 10.1021/acs.jpcb.7b07386] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
Continuous wave electron paramagnetic resonance spectroscopy and two-pulse echo detected spectra of chain-labeled lipids are used to study the dynamics of frozen lipid membranes over the temperature range 77-260 K. Bilayers of ester-linked dihexadecanoylphosphatidylcholine (DPPC) with noninterdigitated chains and ether-linked dihexadecyl phosphatidylcholine (DHPC) with interdigitated chains are considered. Rapid stochastic librations of small angular amplitude are found in both lipid matrices. In noninterdigitated DPPC bilayers, the mean-square angular amplitude, [Formula: see text], of the motion increases with temperature and it is larger close to the chain termini than close to the polar/apolar interface. In contrast, in interdigitated DHPC lamellae, [Formula: see text] is small and temperature and label-position independent at low temperature and increases steeply at high temperature. The rotational correlation time, τc, of librations lies in the subnanosecond range for DPPC and in the nanosecond range for DHPC. In all membrane samples, the temperature dependence of [Formula: see text] resembles that of the mean-square atomic displacement revealed by neutron scattering and a dynamical transition is detected in the range 210-240 K. The results highlight the librational oscillations and the glass-like behavior in bilayer and interdigitated lipid membranes.
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Affiliation(s)
- Erika Aloi
- Department of Physics, Molecular Biophysics Laboratory, University of Calabria , 87036 Rende (CS), Italy
| | - Maria Oranges
- Department of Physics, Molecular Biophysics Laboratory, University of Calabria , 87036 Rende (CS), Italy
| | - Rita Guzzi
- Department of Physics, Molecular Biophysics Laboratory, University of Calabria , 87036 Rende (CS), Italy
| | - Rosa Bartucci
- Department of Physics, Molecular Biophysics Laboratory, University of Calabria , 87036 Rende (CS), Italy
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Guzzi R, Bartucci R. Electron spin resonance of spin-labeled lipid assemblies and proteins. Arch Biochem Biophys 2015; 580:102-11. [PMID: 26116378 DOI: 10.1016/j.abb.2015.06.015] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/01/2015] [Revised: 06/18/2015] [Accepted: 06/22/2015] [Indexed: 01/29/2023]
Abstract
Spin-label electron spin resonance (ESR) spectroscopy is a valuable means to study molecular mobility and interactions in biological systems. This paper deals with conventional, continuous wave ESR of nitroxide spin-labels at 9-GHz providing an introduction to the basic principles of the technique and applications to self-assembled lipid aggregates and proteins. Emphasis is given to segmental lipid chain order and rotational dynamics of lipid structures, environmental polarity of membranes and proteins, structure and conformational dynamics of proteins.
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Affiliation(s)
- Rita Guzzi
- Department of Physics, University of Calabria, 87036 Rende (CS), Italy
| | - Rosa Bartucci
- Department of Physics, University of Calabria, 87036 Rende (CS), Italy.
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Guzzi R, Bartucci R, Esmann M, Marsh D. Lipid Librations at the Interface with the Na,K-ATPase. Biophys J 2015; 108:2825-32. [PMID: 26083922 DOI: 10.1016/j.bpj.2015.05.004] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/14/2015] [Revised: 04/22/2015] [Accepted: 05/06/2015] [Indexed: 10/23/2022] Open
Abstract
Transitions between conformational substates of membrane proteins can be driven by torsional librations in the protein that may be coupled to librational fluctuations of the lipid chains. Here, librational motion of spin-labeled lipid chains in membranous Na,K-ATPase is investigated by spin-echo electron paramagnetic resonance. Lipids at the protein interface are targeted by using negatively charged spin-labeled fatty acids that display selectivity of interaction with the Na,K-ATPase. Echo-detected electron paramagnetic resonance spectra from native membranes are corrected for the contribution from the bilayer regions of the membrane by using spectra from dispersions of the extracted membrane lipids. Lipid librations at the protein interface have a flat profile with chain position, whereas librational fluctuations of the bilayer lipids increase pronouncedly from C-9 onward, then flatten off toward the terminal methyl end of the chains. This difference is accounted for by increased torsional amplitude at the chain ends in bilayers, while the amplitude remains restricted throughout the chain at the protein interface with a limited lengthening in correlation time. The temperature dependence of chain librations at the protein interface strongly resembles that of the spin-labeled protein side chains, suggesting solvent-mediated transitions in the protein are driven by fluctuations in the lipid environment.
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Affiliation(s)
- Rita Guzzi
- Department of Physics, Molecular Biophysics Laboratory and Consorzio Nazionale Interuniversitario per le Scienze Fisiche della Material Unit, University of Calabria, Ponte P. Bucci, Rende, Italy
| | - Rosa Bartucci
- Department of Physics, Molecular Biophysics Laboratory and Consorzio Nazionale Interuniversitario per le Scienze Fisiche della Material Unit, University of Calabria, Ponte P. Bucci, Rende, Italy
| | - Mikael Esmann
- Department of Biomedicine, Aarhus University, Aarhus, Denmark
| | - Derek Marsh
- Max-Planck-Institut für biophysikalische Chemie, Göttingen, Germany.
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Heterogeneity of protein substates visualized by spin-label EPR. Biophys J 2014; 106:716-22. [PMID: 24507612 DOI: 10.1016/j.bpj.2013.12.039] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/23/2013] [Revised: 11/28/2013] [Accepted: 12/19/2013] [Indexed: 11/23/2022] Open
Abstract
The energy landscape of proteins is characterized by a hierarchy of substates, which give rise to conformational heterogeneity at low temperatures. In multiply spin-labeled membranous Na,K-ATPase, this heterogeneous population of conformations is manifest by strong inhomogeneous broadening of the electron paramagnetic resonance (EPR) line shapes and nonexponential spin-echo decays, which undergo a transition to homogeneous broadening and exponential relaxation at higher temperatures (previous study). In this study, we apply these EPR methods to small water-soluble proteins, of the type for which the existence of conformational substates is well established. Both α-helical and β-sheet aqueous proteins that are spin-labeled on a single cysteine residue display spin-echo decays with a single phase-memory time T2M and conventional EPR line shapes with predominantly homogeneous broadening, over a broad range of temperatures from 77 K to ∼ 250 K or higher. Above ∼ 200 K, the residual inhomogeneous broadening is reduced almost to zero. In contrast, both the proteins and the spin label alone, when in a glycerol-water mixture below the glass transition, display heterogeneity in spin-echo phase-memory time and a stronger inhomogeneous broadening of the conventional line shapes, similar to multiply spin-labeled membranous Na,K-ATPase below 200 K. Above 200 K (or the glass transition), a single phase-memory time and predominantly homogeneous broadening are found in both spin-label systems. The results are discussed in terms of solvent-mediated protein transitions, the ability of single spin-label sites to detect conformational heterogeneity, and the desirability of exploring multiple sites for proteins with the size and complexity of the Na,K-ATPase.
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Guzzi R, Babavali M, Bartucci R, Sportelli L, Esmann M, Marsh D. Spin-echo EPR of Na,K-ATPase unfolding by urea. BIOCHIMICA ET BIOPHYSICA ACTA-BIOMEMBRANES 2011; 1808:1618-28. [DOI: 10.1016/j.bbamem.2010.11.008] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/24/2010] [Revised: 11/03/2010] [Accepted: 11/03/2010] [Indexed: 11/15/2022]
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11
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Solvent effect on librational dynamics of spin-labelled haemoglobin by ED- and CW-EPR. EUROPEAN BIOPHYSICS JOURNAL: EBJ 2010; 40:273-9. [DOI: 10.1007/s00249-010-0644-5] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/26/2010] [Revised: 10/08/2010] [Accepted: 11/10/2010] [Indexed: 10/18/2022]
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12
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Dastvan R, Bode BE, Karuppiah MPR, Marko A, Lyubenova S, Schwalbe H, Prisner TF. Optimization of Transversal Relaxation of Nitroxides for Pulsed Electron−Electron Double Resonance Spectroscopy in Phospholipid Membranes. J Phys Chem B 2010; 114:13507-16. [DOI: 10.1021/jp1060039] [Citation(s) in RCA: 47] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Reza Dastvan
- Institute of Physical and Theoretical Chemistry, Institute of Organic Chemistry and Chemical Biology, and Center for Biomolecular Magnetic Resonance, Goethe University, Max-von-Laue-Strasse 7, 60438 Frankfurt am Main, Germany
| | - Bela E. Bode
- Institute of Physical and Theoretical Chemistry, Institute of Organic Chemistry and Chemical Biology, and Center for Biomolecular Magnetic Resonance, Goethe University, Max-von-Laue-Strasse 7, 60438 Frankfurt am Main, Germany
| | - Muruga Poopathi Raja Karuppiah
- Institute of Physical and Theoretical Chemistry, Institute of Organic Chemistry and Chemical Biology, and Center for Biomolecular Magnetic Resonance, Goethe University, Max-von-Laue-Strasse 7, 60438 Frankfurt am Main, Germany
| | - Andriy Marko
- Institute of Physical and Theoretical Chemistry, Institute of Organic Chemistry and Chemical Biology, and Center for Biomolecular Magnetic Resonance, Goethe University, Max-von-Laue-Strasse 7, 60438 Frankfurt am Main, Germany
| | - Sevdalina Lyubenova
- Institute of Physical and Theoretical Chemistry, Institute of Organic Chemistry and Chemical Biology, and Center for Biomolecular Magnetic Resonance, Goethe University, Max-von-Laue-Strasse 7, 60438 Frankfurt am Main, Germany
| | - Harald Schwalbe
- Institute of Physical and Theoretical Chemistry, Institute of Organic Chemistry and Chemical Biology, and Center for Biomolecular Magnetic Resonance, Goethe University, Max-von-Laue-Strasse 7, 60438 Frankfurt am Main, Germany
| | - Thomas F. Prisner
- Institute of Physical and Theoretical Chemistry, Institute of Organic Chemistry and Chemical Biology, and Center for Biomolecular Magnetic Resonance, Goethe University, Max-von-Laue-Strasse 7, 60438 Frankfurt am Main, Germany
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Bartucci R, Guzzi R, Sportelli L, Marsh D. Intramembrane water associated with TOAC spin-labeled alamethicin: electron spin-echo envelope modulation by D2O. Biophys J 2009; 96:997-1007. [PMID: 19186137 DOI: 10.1016/j.bpj.2008.10.024] [Citation(s) in RCA: 30] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/27/2008] [Accepted: 10/21/2008] [Indexed: 11/30/2022] Open
Abstract
Alamethicin is a 20-residue, hydrophobic, helical peptide, which forms voltage-sensitive ion channels in lipid membranes. The helicogenic, nitroxyl amino acid TOAC was substituted isosterically for Aib at residue positions 1, 8, or 16 in a F50/5 alamethicin analog to enable EPR studies. Electron spin-echo envelope modulation (ESEEM) spectroscopy was used to investigate the water exposure of TOAC-alamethicin introduced into membranes of saturated or unsaturated diacyl phosphatidylcholines that were dispersed in D2O. Echo-detected EPR spectra were used to assess the degree of assembly of the peptide in the membrane, via the instantaneous diffusion from intermolecular spin-spin interactions. The profile of residue exposure to water differs between membranes of saturated and unsaturated lipids. In monounsaturated dioleoyl phosphatidylcholine, D2O-ESEEM intensities decrease from TOAC(1) to TOAC(8) and TOAC(16) but not uniformly. This is consistent with a transmembrane orientation for the protoassembled state, in which TOAC(16) is located in the bilayer leaflet opposite to that of TOAC(1) and TOAC(8). Relative to the monomer in fluid bilayers, assembled alamethicin is disposed asymmetrically about the bilayer midplane. In saturated dimyristoyl phosphatidylcholine, the D2O-ESEEM intensity is greatest for TOAC(8), indicating a more superficial location for alamethicin, which correlates with the difference in orientation between gel- and fluid-phase membranes found by conventional EPR of TOAC-alamethicin in aligned phosphatidylcholine bilayers. Increasing alamethicin/lipid ratio in saturated phosphatidylcholine shifts the profile of water exposure toward that with unsaturated lipid, consistent with proposals of a critical concentration for switching between the two different membrane-associated states.
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Affiliation(s)
- R Bartucci
- Dipartimento di Fisica and Unità di Recerca Consorzio Nazionale Interuniversitario per le Scienze fisiche della Materia, Università della Calabria, Arcavacata di Rende, Italy
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Martini G, Ciani L. Electron spin resonance spectroscopy in drug delivery. Phys Chem Chem Phys 2009; 11:211-54. [DOI: 10.1039/b808263d] [Citation(s) in RCA: 29] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/10/2023]
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Isaev NP, Dzuba SA. Fast Stochastic Librations and Slow Rotations of Spin Labeled Stearic Acids in a Model Phospholipid Bilayer at Cryogenic Temperatures. J Phys Chem B 2008; 112:13285-91. [DOI: 10.1021/jp805794c] [Citation(s) in RCA: 42] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
Affiliation(s)
- Nikolay P. Isaev
- Institute of Chemical Kinetics and Combustion, Institutskaya-3, 630090 Novosibirsk, Russia, and Novosibirsk State University, 630090, Pirogova-2, Novosibirsk, Russia
| | - Sergei A. Dzuba
- Institute of Chemical Kinetics and Combustion, Institutskaya-3, 630090 Novosibirsk, Russia, and Novosibirsk State University, 630090, Pirogova-2, Novosibirsk, Russia
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Backbone dynamics of alamethicin bound to lipid membranes: spin-echo electron paramagnetic resonance of TOAC-spin labels. Biophys J 2007; 94:2698-705. [PMID: 18096632 DOI: 10.1529/biophysj.107.115287] [Citation(s) in RCA: 38] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022] Open
Abstract
Alamethicin F50/5 is a hydrophobic peptide that is devoid of charged residues and that induces voltage-dependent ion channels in lipid membranes. The peptide backbone is likely to be involved in the ion conduction pathway. Electron spin-echo spectroscopy of alamethicin F50/5 analogs in which a selected Aib residue (at position n = 1, 8, or 16) is replaced by the TOAC amino-acid spin label was used to study torsional dynamics of the peptide backbone in association with phosphatidylcholine bilayer membranes. Rapid librational motions of limited angular amplitude were observed at each of the three TOAC sites by recording echo-detected spectra as a function of echo delay time, 2tau. Simulation of the time-resolved spectra, combined with conventional EPR measurements of the librational amplitude, shows that torsional fluctuations of the peptide backbone take place on the subnanosecond to nanosecond timescale, with little temperature dependence. Associated fluctuations in polar fields from the peptide could facilitate ion permeation.
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Ciani L, Ristori S, Bonechi C, Rossi C, Martini G. Effect of the preparation procedure on the structural properties of oligonucleotide/cationic liposome complexes (lipoplexes) studied by electron spin resonance and Zeta potential. Biophys Chem 2007; 131:80-7. [PMID: 17950520 DOI: 10.1016/j.bpc.2007.09.011] [Citation(s) in RCA: 21] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/17/2007] [Revised: 09/12/2007] [Accepted: 09/13/2007] [Indexed: 10/22/2022]
Abstract
Lipoplexes with different surface charge were prepared from a short oligonucleotide (20 mer, dsAT) inserted into liposomes of 1,2-dioleoyl-3-trimethylammonium-propane (DOTAP) and 1,2-dioleoyl-sn-glycero-3-phospho-ethanolamine (DOPE). The starting liposomes were prepared by two different procedures, i.e. progressive dsAT addition starting from plain liposomes (titration) and direct mixing of dsAT with pure liposomes (point to point preparation). Lipoplexes were characterized from a molecular point of view by Electron Spin Resonance (ESR) of a cationic spin probe and by Nuclear Magnetic Resonance. Structural and surface features were analysed by Zeta potential (zeta) measurements and Cryo-TEM micrographs. The complete set of results allowed to demonstrate that: i) the interactions between dsAT and cationic lipids were strong and occurred at the liposome surface; ii) the overall shape and physicochemical properties of liposomes did not change when short nucleic acid fragments were added before surface charge neutralization; iii) the bilayer structure of the lipids in lipoplexes was substantially preserved at all charge ratios; iv) the physical status of lipoplexes with electrical charge far from neutrality did not depend on the preparation method.
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Affiliation(s)
- Laura Ciani
- Department of Chemistry & CSGI, University of Florence, Via della Lastruccia 3, 50019 Sesto F no, Firenze, Italy
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De Simone F, Guzzi R, Sportelli L, Marsh D, Bartucci R. Electron spin-echo studies of spin-labelled lipid membranes and free fatty acids interacting with human serum albumin. BIOCHIMICA ET BIOPHYSICA ACTA-BIOMEMBRANES 2007; 1768:1541-9. [PMID: 17397796 DOI: 10.1016/j.bbamem.2007.02.019] [Citation(s) in RCA: 36] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/28/2006] [Revised: 01/29/2007] [Accepted: 02/12/2007] [Indexed: 11/23/2022]
Abstract
Human serum albumin (HSA) is an abundant plasma protein that transports fatty acids and also binds a wide variety of hydrophobic pharmacores. Echo-detected (ED) EPR spectra and D(2)O-electron spin echo envelope modulation (ESEEM) Fourier-transform spectra of spin-labelled free fatty acids and phospholipids were used jointly to investigate the binding of stearic acid to HSA and the adsorption of the protein on dipalmitoyl phosphatidylcholine (DPPC) membranes. In membranes, torsional librations are detected in the ED-spectra, the intensity of which depends on chain position at low temperature. Water penetration into the membrane is seen in the D(2)O-ESEEM spectra, the intensity of which decreases greatly at the middle of the membrane. Both the chain librational motion and the water penetration are only little affected by adsorption of serum albumin at the DPPC membrane surface. In contrast, both the librational motion and the accessibility of the chains to water are very different in the hydrophobic fatty acid binding sites of HSA from those in membranes. Indeed, the librational motion of bound fatty acids is suppressed at low temperature, and is similar for the different chain positions, at all temperatures. Correspondingly, all segments of the bound chains are accessible to water, to rather similar extents.
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Affiliation(s)
- Francesco De Simone
- Dipartimento di Fisica, Laboratorio di Biofisica Molecolare and UdR CNISM, Università della Calabria, I-87036 Arcavacata di Rende, CS, Italy
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Bartucci R, Erilov DA, Guzzi R, Sportelli L, Dzuba SA, Marsh D. Time-resolved electron spin resonance studies of spin-labelled lipids in membranes. Chem Phys Lipids 2006; 141:142-57. [PMID: 16564516 DOI: 10.1016/j.chemphyslip.2006.02.009] [Citation(s) in RCA: 52] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/28/2005] [Accepted: 02/20/2006] [Indexed: 11/22/2022]
Abstract
Recently, developments in time-resolved spin-label electron spin resonance (ESR) spectroscopy have contributed considerably to the study of biomembranes. Two different applications of electron spin echo spectroscopy of spin-labelled phospholipids are reviewed here: (1) the use of partially relaxed echo-detected ESR spectra to study the librational lipid-chain motions in the low-temperature phases of phospholipid bilayers; (2) the use of electron spin echo envelope modulation spectroscopy to determine the penetration of water into phospholipid membranes. Results are described for phosphatidylcholine bilayer membranes, with and without equimolar cholesterol, that are obtained with phosphatidylcholine spin probes site-specifically labelled throughout the sn-2 chain.
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Affiliation(s)
- Rosa Bartucci
- Dipartimento di Fisica, Università della Calabria, Arcavacata di Rende (CS), Italy.
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Erilov DA, Bartucci R, Guzzi R, Marsh D, Dzuba SA, Sportelli L. Librational motion of spin-labeled lipids in high-cholesterol containing membranes from echo-detected EPR spectra. Biophys J 2004; 87:3873-81. [PMID: 15377533 PMCID: PMC1304898 DOI: 10.1529/biophysj.104.046631] [Citation(s) in RCA: 56] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/27/2004] [Accepted: 08/19/2004] [Indexed: 12/22/2022] Open
Abstract
Two-pulse, echo-detected (ED) electron paramagnetic resonance (EPR) spectroscopy was used to study the librational motions of spin-labeled lipids in membranes of dipalmitoylphosphatidylcholine + 50 mol % cholesterol. The temperature dependence, over the range 77-240 K, and the dependence on position of spin-labeling in the sn-2 chain (n=5, 7, 10, 12, and 14) of the phospholipid, were characterized in detail. The experimental ED-spectra were corrected for instantaneous spin diffusion arising from static spin-spin interactions, by using spectra recorded at 77 K, where motional contributions are negligible. Simulations according to a model of rapid, small-amplitude librations about an axis whose direction is randomly distributed are able to describe the experimental spectra. Calibrations, in terms of the amplitude-correlation time product, alpha2tauc, were constructed for diagnostic spectral line-height ratios at different echo delay times, and for relaxation spectra obtained from the ratio of ED-spectra recorded at two different echo delays. The librational amplitude, alpha2, was determined for a spin label at the 14-C position of the lipid chain from the partially motionally averaged hyperfine splitting in the conventional EPR spectra. The librational correlation time, tauc, which is deduced from combination of the conventional and ED-EPR results, lies in the subnanosecond regime and depends only weakly on temperature. The temperature dependence of the ED-EPR spectra arises mainly from an increase in librational amplitude with increasing temperature, and position down the lipid chain. A gradual transition takes place at higher temperatures, from a situation in which segmental torsional librations are cumulative, i.e., the contributions of the individual segments add up progressively upon going down the chain, to one of concerted motion only weakly dependent on chain position. Such librational motions are important for glass-like states and are generally relevant to high lipid packing densities, e.g., in cholesterol-containing raft domains and condensed complexes.
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Affiliation(s)
- Denis A Erilov
- Dipartimento di Fisica and Unità Instituto Nazionale per la Fisica della Materia, Università della Calabria, Arcavacata di Rende (CS), Italy
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Erilov DA, Bartucci R, Guzzi R, Marsh D, Dzuba SA, Sportelli L. Echo-Detected Electron Paramagnetic Resonance Spectra of Spin-Labeled Lipids in Membrane Model Systems. J Phys Chem B 2004. [DOI: 10.1021/jp037249y] [Citation(s) in RCA: 47] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Denis A. Erilov
- Dipartimento di Fisica and Unità INFM, Università della Calabria, I-87036 Arcavacata di Rende (CS), Italy, Abteilung Spektroskopie, Max-Planck-Institut fur biophysikalische Chemie, 37077 Gottingen, Germany, and Institute of Chemical Kinetics and Combustion, Russian Academy of Science, 630090 Novosibirsk, Russian Federation
| | - Rosa Bartucci
- Dipartimento di Fisica and Unità INFM, Università della Calabria, I-87036 Arcavacata di Rende (CS), Italy, Abteilung Spektroskopie, Max-Planck-Institut fur biophysikalische Chemie, 37077 Gottingen, Germany, and Institute of Chemical Kinetics and Combustion, Russian Academy of Science, 630090 Novosibirsk, Russian Federation
| | - Rita Guzzi
- Dipartimento di Fisica and Unità INFM, Università della Calabria, I-87036 Arcavacata di Rende (CS), Italy, Abteilung Spektroskopie, Max-Planck-Institut fur biophysikalische Chemie, 37077 Gottingen, Germany, and Institute of Chemical Kinetics and Combustion, Russian Academy of Science, 630090 Novosibirsk, Russian Federation
| | - Derek Marsh
- Dipartimento di Fisica and Unità INFM, Università della Calabria, I-87036 Arcavacata di Rende (CS), Italy, Abteilung Spektroskopie, Max-Planck-Institut fur biophysikalische Chemie, 37077 Gottingen, Germany, and Institute of Chemical Kinetics and Combustion, Russian Academy of Science, 630090 Novosibirsk, Russian Federation
| | - Sergei A. Dzuba
- Dipartimento di Fisica and Unità INFM, Università della Calabria, I-87036 Arcavacata di Rende (CS), Italy, Abteilung Spektroskopie, Max-Planck-Institut fur biophysikalische Chemie, 37077 Gottingen, Germany, and Institute of Chemical Kinetics and Combustion, Russian Academy of Science, 630090 Novosibirsk, Russian Federation
| | - Luigi Sportelli
- Dipartimento di Fisica and Unità INFM, Università della Calabria, I-87036 Arcavacata di Rende (CS), Italy, Abteilung Spektroskopie, Max-Planck-Institut fur biophysikalische Chemie, 37077 Gottingen, Germany, and Institute of Chemical Kinetics and Combustion, Russian Academy of Science, 630090 Novosibirsk, Russian Federation
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