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Sameer Khan M, Gupta G, Alsayari A, Wahab S, Sahebkar A, Kesharwani P. Advancements in liposomal formulations: A comprehensive exploration of industrial production techniques. Int J Pharm 2024; 658:124212. [PMID: 38723730 DOI: 10.1016/j.ijpharm.2024.124212] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/12/2024] [Revised: 04/24/2024] [Accepted: 05/06/2024] [Indexed: 05/14/2024]
Abstract
Liposomes are nanosized, spherical vesicles consisting of an aqueous core encircled by one or more phospholipid bilayer shells. Liposomes have found extensive use in numerous biomedicine and nanomedicine applications due to their excellent biocompatibility, adaptable chemical composition, ease of preparation, and diverse structural characteristics. These applications include nanocarriers for drug delivery, immunoassays, nutraceuticals, tissue engineering, clinical diagnostics, and theranostics formulations. These applications stimulated significant efforts toward scaling up formation processes in anticipation of appropriate industrial advancement. Despite the advancements in conventional methods and the emergence of new approaches for liposome production, their inherent susceptibility to chemical and mechanical influences contributes to critical challenges, including limited colloidal stability and decreased efficiency in encapsulating cargo molecules. With this context, the current review provides brief insights into liposomes conventional and novel industrial production techniques. With a special focus on the structural parameters, and pivotal elements influencing the synthesis of an appropriate and stable formulation, followed by the various regulatory aspects of industrial production.
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Affiliation(s)
- Mohammad Sameer Khan
- Department of Pharmaceutics, School of Pharmaceutical Education and Research, Jamia Hamdard, New Delhi 110062, India
| | - Garima Gupta
- Graphic Era Hill University, Dehradun 248002, India
| | - Abdulrhman Alsayari
- Department of Pharmacognosy, College of Pharmacy, King Khalid University, Abha 62529, Saudi Arabia
| | - Shadma Wahab
- Department of Pharmacognosy, College of Pharmacy, King Khalid University, Abha 62529, Saudi Arabia
| | - Amirhossein Sahebkar
- Center for Global Health Research, Saveetha Medical College and Hospitals, Saveetha Institute of Medical and Technical Sciences, Saveetha University, Chennai, India; Biotechnology Research Center, Pharmaceutical Technology Institute, Mashhad University of Medical Sciences, Mashhad, Iran
| | - Prashant Kesharwani
- Department of Pharmaceutics, School of Pharmaceutical Education and Research, Jamia Hamdard, New Delhi 110062, India.
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2
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Gupta J, Sharma VK, Srinivasan H, Bhatt H, Sakai VG, Mukhopadhyay R, Mitra S. Modulation of Phase Behavior and Microscopic Dynamics in Cationic Vesicles by 1-Decyl-3-methylimidazolium Bromide. LANGMUIR : THE ACS JOURNAL OF SURFACES AND COLLOIDS 2024; 40:504-518. [PMID: 38126298 DOI: 10.1021/acs.langmuir.3c02755] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/23/2023]
Abstract
Synthetic cationic lipids have garnered significant attention as promising candidates for gene/DNA transfection in therapeutic applications. The phase behavior of the vesicles formed by these lipids is intriguing, revealing intricate connections to the structure and dynamics of the membrane. These phenomena emerge from the complex interplay between hydrophobic and electrostatic interactions of the lipids. In this study, we explore the impact of an ionic liquid-based surfactant, 1-decyl-3-methylimidazolium bromide (DMIM[Br]), on the structural, dynamical, and phase behavior of cationic dihexadecyldimethylammonium bromide (DHDAB) vesicles. Our investigations indicate that the addition of DMIM[Br] increases the vesicle size while thinning the membrane. Further, DMIM[Br] also induces substantial changes in the membrane phase behavior. At 10 and 25 mol %, DMIM[Br] eliminates the pre-transition from coagel to intermediate crystalline (IC) phase and decreases the onset temperature of the main phase transition to the fluid phase. In the cooling cycle, the addition of DMIM[Br] further induces the formation of an intermediate gel phase. This behavior is reminiscent of the non-synchronous ordering observed in the DODAB membrane, a longer-chain counterpart of DHDAB. Interestingly, at 40 mol % of DMIM[Br], the formation of the intermediate gel phase is largely suppressed. Neutron scattering data provide evidence that the addition of DMIM[Br] enhances lipid mobility in coagel and fluid phases, suggesting that DMIM[Br] acts as a plasticizer, enhancing membrane fluidity across all of the phases. Our findings infer that DMIM[Br] modulates the membrane's phase behavior and fluidity, two essential ingredients for the efficient transport of cargo, by controlling the balance of electrostatic and hydrophobic interactions.
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Affiliation(s)
- Jyoti Gupta
- Solid State Physics Division, Bhabha Atomic Research Centre, Mumbai 400085, India
- Homi Bhabha National Institute, Mumbai 400094, India
| | - Veerendra Kumar Sharma
- Solid State Physics Division, Bhabha Atomic Research Centre, Mumbai 400085, India
- Homi Bhabha National Institute, Mumbai 400094, India
| | - Harish Srinivasan
- Solid State Physics Division, Bhabha Atomic Research Centre, Mumbai 400085, India
- Homi Bhabha National Institute, Mumbai 400094, India
| | - Himal Bhatt
- High Pressure & Synchrotron Radiation Physics Division, Bhabha Atomic Research Centre, Mumbai 400085, India
- Homi Bhabha National Institute, Mumbai 400094, India
| | - Victoria García Sakai
- ISIS Neutron and Muon Source, Science and Technology Facilities Council, Rutherford Appleton Laboratory, Didcot OX11 0QX, United Kingdom
| | | | - Subhankur Mitra
- Solid State Physics Division, Bhabha Atomic Research Centre, Mumbai 400085, India
- Homi Bhabha National Institute, Mumbai 400094, India
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3
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Kryuchkova A, Savin A, Kiseleva A, Dukhinova M, Krivoshapkina E, Krivoshapkin P. Magnetothermal spider silk-based scaffolds for cartilage regeneration. Int J Biol Macromol 2023; 253:127246. [PMID: 37797862 DOI: 10.1016/j.ijbiomac.2023.127246] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/10/2023] [Revised: 10/02/2023] [Accepted: 10/02/2023] [Indexed: 10/07/2023]
Abstract
Developing biocompatible, magnetically controlled polymers is a multifunctional solution to many surgical complications. By combining nanoparticle technology with the latest advancements in polymer materials science, we created a multicomponent hybrid system comprised of a robust native spider silk-based matrix; a Mn0.9Zn0.1Fe2O4 nanoparticles coating to provide a controlled thermal trigger for drug release; and liposomes, which act as drug carriers. Fluorescent microscope images show that the dye loaded into the liposomes is released when the system is exposed to an alternating magnetic field due to heating of ferromagnetic nanoparticles, which had a low Curie temperature (40-46°С). The silk matrix also demonstrated outstanding biocompatibility, creating a favorable environment for human postnatal fibroblast cell adhesion, and paving the way for their directed growth. This paper describes a complex approach to cartilage regeneration by developing a spider silk-based scaffold with anatomical mechanical properties for controlled drug delivery in a multifunctional autologous matrix-induced chondrogenesis.
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Affiliation(s)
- Anastasia Kryuchkova
- ITMO University, 9 Lomonosova Street, Saint Petersburg 191002, Russian Federation
| | - Artemii Savin
- ITMO University, 9 Lomonosova Street, Saint Petersburg 191002, Russian Federation
| | - Aleksandra Kiseleva
- ITMO University, 9 Lomonosova Street, Saint Petersburg 191002, Russian Federation
| | - Marina Dukhinova
- ITMO University, 9 Lomonosova Street, Saint Petersburg 191002, Russian Federation
| | - Elena Krivoshapkina
- ITMO University, 9 Lomonosova Street, Saint Petersburg 191002, Russian Federation
| | - Pavel Krivoshapkin
- ITMO University, 9 Lomonosova Street, Saint Petersburg 191002, Russian Federation.
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4
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Sharma VK, Mamontov E. Multiscale lipid membrane dynamics as revealed by neutron spectroscopy. Prog Lipid Res 2022; 87:101179. [PMID: 35780913 DOI: 10.1016/j.plipres.2022.101179] [Citation(s) in RCA: 11] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/04/2022] [Revised: 06/25/2022] [Accepted: 06/27/2022] [Indexed: 12/22/2022]
Abstract
The plasma membrane is one of the principal structural components of the cell and, therefore, one of the key components of the cellular life. Because the membrane's dynamics links the membrane's structure and function, the complexity and the broad range of the membrane's motions are essential for the enormously diverse functionality of the cell membrane. Even for the main membrane component, the lipid bilayer, considered alone, the range and complexity of the lipid motions are remarkable. Spanning the time scale from sub-picosecond to minutes and hours, the lipid motion in a bilayer is challenging to study even when a broad array of dynamic measurement techniques is employed. Neutron scattering plays a special role among such dynamic measurement techniques, particularly, because it involves the energy transfers commensurate with the typical intra- and inter- molecular dynamics and the momentum transfers commensurate with intra- and inter-molecular distances. Thus, using neutron scattering-based techniques, the spatial and temporal information on the lipid motion can be obtained and analysed simultaneously. Protium vs. deuterium sensitivity and non-destructive character of the neutron probe add to the remarkable prowess of neutron scattering for elucidating the lipid dynamics. Herein we present an overview of the neutron scattering-based studies of lipid dynamics in model membranes, with a discussion of the direct relevance and implications to the real-life cell membranes. The latter are much more complex systems than simple model membranes, consisting of heterogeneous non-stationary domains composed of lipids, proteins, and other small molecules, such as carbohydrates. Yet many fundamental aspects of the membrane behavior and membrane interactions with other molecules can be understood from neutron scattering measurements of the model membranes. For example, such studies can provide a great deal of information on the interactions of antimicrobial compounds with the lipid matrix of a pathogen membrane, or the interactions of drug molecules with the plasma membrane. Finally, we briefly discuss the recently emerging field of neutron scattering membrane studies with a reach far beyond the model membrane systems.
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Affiliation(s)
- V K Sharma
- Solid State Physics Division, Bhabha Atomic Research Centre, Mumbai 400085, India; Homi Bhabha National Institute, Mumbai 400094, India.
| | - E Mamontov
- Neutron Scattering Division, Oak Ridge National Laboratory, Oak Ridge, TN 37831, USA
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5
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Radhakrishnan K, Singh SP. Explicit characterization of counterion dynamics around a flexible polyelectrolyte. Phys Rev E 2022; 105:044501. [PMID: 35590562 DOI: 10.1103/physreve.105.044501] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/08/2021] [Accepted: 03/04/2022] [Indexed: 06/15/2023]
Abstract
The article presents a comprehensive study of counterion dynamics around a generic linear polyelectrolyte chain with the help of coarse-grained computer simulations. The ion-chain coupling is discussed in the form of binding time, mean-square displacement (MSD) relative to the chain, local ion transport coefficient, and spatiotemporal correlations in the effective charge. We have shown that a counterion exhibits subdiffusive behavior 〈δR^{2}〉∼t^{δ}, δ≈0.9 w.r.t. chain's center of mass. The MSD of ions perpendicularly outward from the chain segment exhibits a smaller subdiffusive exponent compared to the one along the chain backbone. The effective diffusivity of ion is the lowest in chain's close proximity, extending up to the length-scale of radius of gyration R_{g}. Beyond R_{g} at larger distances, they attain diffusivity of free ion with a smooth cross-over from the adsorbed regime to the free ion regime. We have shown that the effective diffusivity drastically decreases for the multivalent ions, while the crossover length scale remains the same. Conversely, with increasing salt concentration the coupling-length scale reduces, while the diffusivity remains unaltered. The effective diffusivity of adsorbed-ion reveals an exponential reduction with electrostatic interaction strength. We further corroborate this from the binding time of ions on the chain, which also grows exponentially with the coupling strength of the ion-polymer duo. Moreover, the binding time of ions exhibits a weak dependence with salt concentration for the monovalent salt, while for multivalent salts the binding time decreases dramatically with concentration. Our work also elucidates fluctuations in the effective charge per site, where it exhibits strong negative correlations at short length-scales.
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Affiliation(s)
- Keerthi Radhakrishnan
- Department of Physics, Indian Institute of Science Education and Research, Bhopal 462 066, Madhya Pradesh, India
| | - Sunil P Singh
- Department of Physics, Indian Institute of Science Education and Research, Bhopal 462 066, Madhya Pradesh, India
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Lombardo D, Kiselev MA. Methods of Liposomes Preparation: Formation and Control Factors of Versatile Nanocarriers for Biomedical and Nanomedicine Application. Pharmaceutics 2022; 14:pharmaceutics14030543. [PMID: 35335920 PMCID: PMC8955843 DOI: 10.3390/pharmaceutics14030543] [Citation(s) in RCA: 116] [Impact Index Per Article: 58.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/23/2022] [Revised: 02/21/2022] [Accepted: 02/24/2022] [Indexed: 12/13/2022] Open
Abstract
Liposomes are nano-sized spherical vesicles composed of an aqueous core surrounded by one (or more) phospholipid bilayer shells. Owing to their high biocompatibility, chemical composition variability, and ease of preparation, as well as their large variety of structural properties, liposomes have been employed in a large variety of nanomedicine and biomedical applications, including nanocarriers for drug delivery, in nutraceutical fields, for immunoassays, clinical diagnostics, tissue engineering, and theranostics formulations. Particularly important is the role of liposomes in drug-delivery applications, as they improve the performance of the encapsulated drugs, reducing side effects and toxicity by enhancing its in vitro- and in vivo-controlled delivery and activity. These applications stimulated a great effort for the scale-up of the formation processes in view of suitable industrial development. Despite the improvements of conventional approaches and the development of novel routes of liposome preparation, their intrinsic sensitivity to mechanical and chemical actions is responsible for some critical issues connected with a limited colloidal stability and reduced entrapment efficiency of cargo molecules. This article analyzes the main features of the formation and fabrication techniques of liposome nanocarriers, with a special focus on the structure, parameters, and the critical factors that influence the development of a suitable and stable formulation. Recent developments and new methods for liposome preparation are also discussed, with the objective of updating the reader and providing future directions for research and development.
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Affiliation(s)
- Domenico Lombardo
- Consiglio Nazionale delle Ricerche, Istituto per i Processi Chimico-Fisici, 98158 Messina, Italy
- Correspondence: ; Tel.: +39-090-39762222
| | - Mikhail A. Kiselev
- Frank Laboratory of Neutron Physics, Joint Institute for Nuclear Research, 141980 Dubna, Moscow Region, Russia;
- Department of Nuclear Physics, Dubna State University, 141980 Dubna, Moscow Region, Russia
- Physics Department, Lomonosov Moscow State University, 119991 Moscow, Moscow Region, Russia
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Recent developments in membrane curvature sensing and induction by proteins. Biochim Biophys Acta Gen Subj 2021; 1865:129971. [PMID: 34333084 DOI: 10.1016/j.bbagen.2021.129971] [Citation(s) in RCA: 20] [Impact Index Per Article: 6.7] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/04/2021] [Revised: 07/11/2021] [Accepted: 07/25/2021] [Indexed: 12/22/2022]
Abstract
BACKGROUND Membrane-bound intracellular organelles have characteristic shapes attributed to different local membrane curvatures, and these attributes are conserved across species. Over the past decade, it has been confirmed that specific proteins control the large curvatures of the membrane, whereas many others due to their specific structural features can sense the curvatures and bind to the specific geometrical cues. Elucidating the interplay between sensing and induction is indispensable to understand the mechanisms behind various biological processes such as vesicular trafficking and budding. SCOPE OF REVIEW We provide an overview of major classes of membrane proteins and the mechanisms of curvature sensing and induction. We then discuss the importance of membrane elastic characteristics to induce the membrane shapes similar to intracellular organelles. Finally, we survey recently available assays developed for studying the curvature sensing and induction by many proteins. MAJOR CONCLUSIONS Recent theoretical/computational modeling along with experimental studies have uncovered fascinating connections between lipid membrane and protein interactions. However, the phenomena of protein localization and synchronization to generate spatiotemporal dynamics in membrane morphology are yet to be fully understood. GENERAL SIGNIFICANCE The understanding of protein-membrane interactions is essential to shed light on various biological processes. This further enables the technological applications of many natural proteins/peptides in therapeutic treatments. The studies of membrane dynamic shapes help to understand the fundamental functions of membranes, while the medicinal roles of various macromolecules (such as proteins, peptides, etc.) are being increasingly investigated.
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Sugita M, Onishi I, Irisa M, Yoshida N, Hirata F. Molecular Recognition and Self-Organization in Life Phenomena Studied by a Statistical Mechanics of Molecular Liquids, the RISM/3D-RISM Theory. Molecules 2021; 26:E271. [PMID: 33430461 PMCID: PMC7826681 DOI: 10.3390/molecules26020271] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/08/2020] [Revised: 12/23/2020] [Accepted: 12/28/2020] [Indexed: 11/18/2022] Open
Abstract
There are two molecular processes that are essential for living bodies to maintain their life: the molecular recognition, and the self-organization or self-assembly. Binding of a substrate by an enzyme is an example of the molecular recognition, while the protein folding is a good example of the self-organization process. The two processes are further governed by the other two physicochemical processes: solvation and the structural fluctuation. In the present article, the studies concerning the two molecular processes carried out by Hirata and his coworkers, based on the statistical mechanics of molecular liquids or the RISM/3D-RISM theory, are reviewed.
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Affiliation(s)
- Masatake Sugita
- Department of Computer Science, School of Computing, Tokyo Institute of Technology, W8-76, 2-12-1, Ookayama Meguro-ku, Tokyo 152-8550, Japan;
| | - Itaru Onishi
- Department of Bioscience and Bioinformatics, Kyushu Institute of Technology, Iizuka, Fukuoka 820-8502, Japan; (I.O.); (M.I.)
| | - Masayuki Irisa
- Department of Bioscience and Bioinformatics, Kyushu Institute of Technology, Iizuka, Fukuoka 820-8502, Japan; (I.O.); (M.I.)
| | - Norio Yoshida
- Department of Chemistry, Kyushu University, Fukuoka, Fukuoka 812-8581, Japan;
| | - Fumio Hirata
- Theoretical and Computational Molecular Science, Institute for Molecular Science, Okazaki, Aichi 444-8585, Japan
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9
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Sharma M, Joshi J, Kumar Chouhan N, N. Talati M, Vaidya S, Kumar A. Liposome-A Comprehensive Approach for Researchers. Mol Pharmacol 2020. [DOI: 10.5772/intechopen.93256] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022] Open
Abstract
Bangham was first to develop these spherical-shaped nano-vesicles called liposomes in the early 1960s. Today, liposomes have emerged as crucial tools for bettering the delivery of drugs that majorly includes-antifungal drug, peptide hormones, enzymes, vaccines antimicrobial agents, drugs against cancer, and genetic materials. Following the different manufacturing practices and versatile properties liposomes can be categorized in various parameters of size, charge, poly-dispersity index, encapsulation efficiency, solubility properties, and lamellarity. Alteration in such parameters elevates the loading and bioavailability of a drug by giving more clear target specification, desired or controlled release. This bibliographic chapter provides a comprehensive overview of methods for the preparation of liposomes with other perspectives that majorly includes—physio-chemical characteristics, dosage regimen, advantages over other delivery systems, approved liposomal based drugs and other ongoing drugs in clinical trials. It will help researchers to breakthrough more structurally successful delivery vehicles depending upon their various physic-chemical properties.
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Pritzl SD, Urban P, Prasselsperger A, Konrad DB, Frank JA, Trauner D, Lohmüller T. Photolipid Bilayer Permeability is Controlled by Transient Pore Formation. LANGMUIR : THE ACS JOURNAL OF SURFACES AND COLLOIDS 2020; 36:13509-13515. [PMID: 33143416 DOI: 10.1021/acs.langmuir.0c02229] [Citation(s) in RCA: 12] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/11/2023]
Abstract
Controlling the release or uptake of (bio-) molecules and drugs from liposomes is critically important for a range of applications in bioengineering, synthetic biology, and drug delivery. In this paper, we report how the reversible photoswitching of synthetic lipid bilayer membranes made from azobenzene-containing phosphatidylcholine (azo-PC) molecules (photolipids) leads to increased membrane permeability. We show that cell-sized, giant unilamellar vesicles (GUVs) prepared from photolipids display leakage of fluorescent dyes after irradiation with UV-A and visible light. Langmuir-Blodgett and patch-clamp measurements show that the permeability is the result of transient pore formation. By comparing the trans-to-cis and cis-to-trans isomerization process, we find that this pore formation is the result of area fluctuations and a change of the area cross-section between both photolipid isomers.
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Affiliation(s)
- Stefanie D Pritzl
- Chair for Photonics and Optoelectronics, Nano-Institute Munich, Department of Physics, Ludwig-Maximilians-Universität (LMU), Königinstraße 10, 80539 Munich, Germany
| | - Patrick Urban
- Chair for Photonics and Optoelectronics, Nano-Institute Munich, Department of Physics, Ludwig-Maximilians-Universität (LMU), Königinstraße 10, 80539 Munich, Germany
| | - Alexander Prasselsperger
- Chair for Photonics and Optoelectronics, Nano-Institute Munich, Department of Physics, Ludwig-Maximilians-Universität (LMU), Königinstraße 10, 80539 Munich, Germany
| | - David B Konrad
- Department of Chemistry, Ludwig-Maximilians-Universität München, Butenandtstraße 5-13, 81377 Munich, Germany
- Department of Pharmacy, Ludwig-Maximilians-Universität München, Butenandtstraße 5-13, 81377 Munich, Germany
| | - James A Frank
- Vollum Institute, Oregon Health & Science University, 3181 SW Sam Jackson Park Road, Portland, Oregon 97239, United States
| | - Dirk Trauner
- Department of Chemistry, Ludwig-Maximilians-Universität München, Butenandtstraße 5-13, 81377 Munich, Germany
- Department of Chemistry, New York University, Silver Center, 100 Washington Square East, Room 712, New York 10003, United States
| | - Theobald Lohmüller
- Chair for Photonics and Optoelectronics, Nano-Institute Munich, Department of Physics, Ludwig-Maximilians-Universität (LMU), Königinstraße 10, 80539 Munich, Germany
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Carotenuto AR, Lunghi L, Piccolo V, Babaei M, Dayal K, Pugno N, Zingales M, Deseri L, Fraldi M. Mechanobiology predicts raft formations triggered by ligand-receptor activity across the cell membrane. JOURNAL OF THE MECHANICS AND PHYSICS OF SOLIDS 2020; 141:103974. [PMID: 32461703 PMCID: PMC7243794 DOI: 10.1016/j.jmps.2020.103974] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/10/2020] [Revised: 04/11/2020] [Accepted: 04/13/2020] [Indexed: 05/05/2023]
Abstract
Clustering of ligand-binding receptors of different types on thickened isles of the cell membrane, namely lipid rafts, is an experimentally observed phenomenon. Although its influence on cell's response is deeply investigated, the role of the coupling between mechanical processes and multiphysics involving the active receptors and the surrounding lipid membrane during ligand-binding has not yet been understood. Specifically, the focus of this work is on G-protein-coupled receptors (GPCRs), the widest group of transmembrane proteins in animals, which regulate specific cell processes through chemical signalling pathways involving a synergistic balance between the cyclic Adenosine Monophosphate (cAMP) produced by active GPCRs in the intracellular environment and its efflux, mediated by the Multidrug Resistance Proteins (MRPs) transporters. This paper develops a multiphysics approach based on the interplay among energetics, multiscale geometrical changes and mass balance of species, i.e. active GPCRs and MRPs, including diffusion and kinetics of binding and unbinding. Because the obtained energy depends upon both the kinematics and the changes of species densities, balance of mass and of linear momentum are coupled and govern the space-time evolution of the cell membrane. The mechanobiology involving remodelling and change of lipid ordering of the cell membrane allows to predict dynamics of transporters and active receptors -in full agreement with experimentally observed cAMP levels- and how the latter trigger rafts formation and cluster on such sites. Within the current scientific debate on Severe Acute Respiratory Syndrome CoronaVirus 2 (SARS-CoV-2) and on the basis of the ascertained fact that lipid rafts often serve as an entry port for viruses, it is felt that approaches accounting for strong coupling among mechanobiological aspects could even turn helpful in better understanding membrane-mediated phenomena such as COVID-19 virus-cell interaction.
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Affiliation(s)
- Angelo R. Carotenuto
- Department of Structures for Engineering and Architecture, University of Napoli “Federico II”, Italy
| | - Laura Lunghi
- Smiling International School, formerly at the Department of Life Sciences and Biotech., University of Ferrara, Italy
| | - Valentina Piccolo
- Department of Civil, Environmental and Mechanical Engineering, University of Trento, Italy
| | - Mahnoush Babaei
- Department of Civil and Environmental Engineering, Department of Mechanical Engineering, Carnegie Mellon, USA
| | - Kaushik Dayal
- Department of Civil and Environmental Engineering, Department of Mechanical Engineering, Carnegie Mellon, USA
| | - Nicola Pugno
- Department of Civil, Environmental and Mechanical Engineering, University of Trento, Italy
- Laboratory of Bio-inspired, Bionic, Nano, Meta Materials & Mechanics, Department of Civil, Environmental and Mechanical Engineering, University of Trento, Via Mesiano, 77, Trento 38123, Italy
- School of Engineering and Materials Science, Queen Mary University of London, Mile End Road, London E1 4NS, United Kingdom
| | - Massimiliano Zingales
- Dipartimento di Ingegneria, Universitàdi Palermo, viale delle Scienze ed.8, 90128 Palermo, Italy
| | - Luca Deseri
- Department of Civil, Environmental and Mechanical Engineering, University of Trento, Italy
- Department of Civil and Environmental Engineering, Department of Mechanical Engineering, Carnegie Mellon, USA
- Department of Mechanical Engineering and Material Sciences, SSoE, University of Pittsburgh USA
- Department of Nanomedicine, The Houston Methodist Research Institute, USA
| | - Massimiliano Fraldi
- Department of Structures for Engineering and Architecture, University of Napoli “Federico II”, Italy
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12
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van 't Klooster JS, Cheng TY, Sikkema HR, Jeucken A, Moody B, Poolman B. Periprotein lipidomes of Saccharomyces cerevisiae provide a flexible environment for conformational changes of membrane proteins. eLife 2020; 9:57003. [PMID: 32301705 PMCID: PMC7182430 DOI: 10.7554/elife.57003] [Citation(s) in RCA: 35] [Impact Index Per Article: 8.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/17/2020] [Accepted: 04/09/2020] [Indexed: 12/20/2022] Open
Abstract
Yeast tolerates a low pH and high solvent concentrations. The permeability of the plasma membrane (PM) for small molecules is low and lateral diffusion of proteins is slow. These findings suggest a high degree of lipid order, which raises the question of how membrane proteins function in such an environment. The yeast PM is segregated into the Micro-Compartment-of-Can1 (MCC) and Pma1 (MCP), which have different lipid compositions. We extracted proteins from these microdomains via stoichiometric capture of lipids and proteins in styrene-maleic-acid-lipid-particles (SMALPs). We purified SMALP-lipid-protein complexes by chromatography and quantitatively analyzed periprotein lipids located within the diameter defined by one SMALP. Phospholipid and sterol concentrations are similar for MCC and MCP, but sphingolipids are enriched in MCP. Ergosterol is depleted from this periprotein lipidome, whereas phosphatidylserine is enriched relative to the bulk of the plasma membrane. Direct detection of PM lipids in the 'periprotein space' supports the conclusion that proteins function in the presence of a locally disordered lipid state.
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Affiliation(s)
- Joury S van 't Klooster
- Department of Biochemistry, University of Groningen Groningen Biomolecular Sciences and Biotechnology Institute, Groningen, Netherlands
| | - Tan-Yun Cheng
- Division of Rheumatology, Inflammation and Immunity Brigham and Women's Hospital, Harvard Medical School, Boston, United States
| | - Hendrik R Sikkema
- Department of Biochemistry, University of Groningen Groningen Biomolecular Sciences and Biotechnology Institute, Groningen, Netherlands
| | - Aike Jeucken
- Department of Biochemistry, University of Groningen Groningen Biomolecular Sciences and Biotechnology Institute, Groningen, Netherlands
| | - Branch Moody
- Division of Rheumatology, Inflammation and Immunity Brigham and Women's Hospital, Harvard Medical School, Boston, United States.,Department of Medicine, Harvard Medical School, Boston, United States
| | - Bert Poolman
- Department of Biochemistry, University of Groningen Groningen Biomolecular Sciences and Biotechnology Institute, Groningen, Netherlands
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13
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On the Origin of the Anomalous Behavior of Lipid Membrane Properties in the Vicinity of the Chain-Melting Phase Transition. Sci Rep 2020; 10:5749. [PMID: 32238845 PMCID: PMC7113312 DOI: 10.1038/s41598-020-62577-9] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/11/2018] [Accepted: 01/28/2020] [Indexed: 11/08/2022] Open
Abstract
Biomembranes are key objects of numerous studies in biology and biophysics of great importance to medicine. A few nanometers thin quasi two-dimensional liquid crystalline membranes with bending rigidity of a few kT exhibit unusual properties and they are the focus of theoretical and experimental physics. The first order chain-melting phase transition of lipid membranes is observed to be accompanied by a pseudocritical behavior of membrane physical-chemical properties. However, the investigation of the nature of the anomalous swelling of a stack of lipid membranes in the vicinity of the transition by different groups led to conflicting conclusions about the level of critical density fluctuations and their impact on the membrane softening. Correspondingly, conclusions about the contribution of Helfrich's undulations to the effect of swelling were different. In our work we present a comprehensive complementary neutron small-angle and spin-echo study directly showing the presence of significant critical fluctuations in the vicinity of the transition which induce membrane softening. However, contrary to the existing paradigm, we demonstrate that the increased undulation forces cannot explain the anomalous swelling. We suggest that the observed effect is instead determined by the dominating increase of short-range entropic repulsion.
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14
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Lombardo D, Calandra P, Pasqua L, Magazù S. Self-assembly of Organic Nanomaterials and Biomaterials: The Bottom-Up Approach for Functional Nanostructures Formation and Advanced Applications. MATERIALS (BASEL, SWITZERLAND) 2020; 13:E1048. [PMID: 32110877 PMCID: PMC7084717 DOI: 10.3390/ma13051048] [Citation(s) in RCA: 51] [Impact Index Per Article: 12.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 02/02/2020] [Revised: 02/17/2020] [Accepted: 02/20/2020] [Indexed: 12/11/2022]
Abstract
In this paper, we survey recent advances in the self-assembly processes of novel functional platforms for nanomaterials and biomaterials applications. We provide an organized overview, by analyzing the main factors that influence the formation of organic nanostructured systems, while putting into evidence the main challenges, limitations and emerging approaches in the various fields of nanotechology and biotechnology. We outline how the building blocks properties, the mutual and cooperative interactions, as well as the initial spatial configuration (and environment conditions) play a fundamental role in the construction of efficient nanostructured materials with desired functional properties. The insertion of functional endgroups (such as polymers, peptides or DNA) within the nanostructured units has enormously increased the complexity of morphologies and functions that can be designed in the fabrication of bio-inspired materials capable of mimicking biological activity. However, unwanted or uncontrollable effects originating from unexpected thermodynamic perturbations or complex cooperative interactions interfere at the molecular level with the designed assembly process. Correction and harmonization of unwanted processes is one of the major challenges of the next decades and requires a deeper knowledge and understanding of the key factors that drive the formation of nanomaterials. Self-assembly of nanomaterials still remains a central topic of current research located at the interface between material science and engineering, biotechnology and nanomedicine, and it will continue to stimulate the renewed interest of biologist, physicists and materials engineers by combining the principles of molecular self-assembly with the concept of supramolecular chemistry.
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Affiliation(s)
- Domenico Lombardo
- Consiglio Nazionale delle Ricerche, Istituto per i Processi Chimico-Fisici, 98158 Messina, Italy
| | - Pietro Calandra
- Consiglio Nazionale delle Ricerche, Istituto Studio Materiali Nanostrutturati, 00015 Roma, Italy;
| | - Luigi Pasqua
- Department of Environmental and Chemical Engineering, University of Calabria, 87036 Rende, Italy;
| | - Salvatore Magazù
- Dipartimento di Scienze Matematiche e Informatiche, Scienze Fisiche e Scienze della Terra, Università di Messina, 98166 Messina, Italy;
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15
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Lombardo D, Calandra P, Teresa Caccamo M, Magazù S, Pasqua L, A. Kiselev M. Interdisciplinary approaches to the study of biological membranes. AIMS BIOPHYSICS 2020. [DOI: 10.3934/biophy.2020020] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022] Open
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16
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Optical Birefringence Growth Driven by Magnetic Field in Liquids: The Case of Dibutyl Phosphate/Propylamine System. APPLIED SCIENCES-BASEL 2019. [DOI: 10.3390/app10010164] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/27/2023]
Abstract
Magnetically-induced birefringence is usually low in molecular liquids owing to the low magnetic energy of molecules with respect to the thermal one. Despite this, it has been found that a mixture of dibutyl phosphate and propylamine at propylamine molar ratio (X) around 0.33 surprisingly gives an intense effect (∆n/λ ≈ −0.1 at 1 Tesla). In this paper the time- and intensity- response to the magnetic field of such mixture have been studied. It was found that the reaction to the magnetic field is unusually slow (from several minutes to hours) depending of the magnetic field intensity. On the basis of the data, the model of orientable dipoles dispersed in a matrix enables to interpret the magnetic field-induced self-assembly in terms of soft molecules-based nanostructures. The analogy with systems made of magnetically polarizable (solid or soft) particles dispersed in liquid carrier allows understanding, at the microscopic scale, the molecular origin and the supra-molecular dynamics involved in the observed behavior. The data present a novel phenomenon in liquid phase where the progressive building up/change of ordered and strongly interacting amphiphiles is driven by the magnetic field.
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17
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Sharma VK, Mitra S, Mukhopadhyay R. Dynamic Landscape in Self-Assembled Surfactant Aggregates. LANGMUIR : THE ACS JOURNAL OF SURFACES AND COLLOIDS 2019; 35:14151-14172. [PMID: 30730752 DOI: 10.1021/acs.langmuir.8b03596] [Citation(s) in RCA: 17] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/08/2023]
Abstract
A process in which a disordered system of pre-existing molecules generates an organized structure through specific, local interactions among the molecules themselves is termed molecular self-assembly. Micelles, microemulsions, and vesicles are examples of such self-assembled systems where amphiphilic molecules are involved. As the functional properties of these systems (such as wetting and emulsification, release of solubilized drugs, etc.) are dictated by the dynamic behavior of the surfactants at the molecular level, it is of immense interest to investigate these systems for the same. The dynamics in soft matter systems is quite complex, involving different time and length scales. We used a combination of neutron scattering and molecular dynamics simulation studies in probing the dynamic landscape in various self-assembled surfactant aggregates. Neutron scattering experiments were carried out using several spectrometers covering a wide dynamic range to probe motions on different time scales. The interaction between the surfactants can be varied by changing the molecular architecture, counterion concentration, temperature, and so forth. It is important to study the effect of these parameters on the dynamics of surfactants in these aggregates. We have carried out experiments on various ionic (anionic as well as cationic) micelles with varied counterion concentrations, vesicles, and lipid bilayers to unravel the complex dynamic features present in these systems. In this feature article, we will discuss some important results of our recent work on dynamics in these self-assembled surfactant aggregates.
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Affiliation(s)
| | - Subhankur Mitra
- Solid State Physics Division , Bhabha Atomic Research Centre , Mumbai 400085 , India
- Homi Bhabha National Institute , Anushaktinagar, Mumbai 400094 , India
| | - Ramaprosad Mukhopadhyay
- Solid State Physics Division , Bhabha Atomic Research Centre , Mumbai 400085 , India
- Homi Bhabha National Institute , Anushaktinagar, Mumbai 400094 , India
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18
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Blackmore J, Shrivastava S, Sallet J, Butler CR, Cleveland RO. Ultrasound Neuromodulation: A Review of Results, Mechanisms and Safety. ULTRASOUND IN MEDICINE & BIOLOGY 2019; 45:1509-1536. [PMID: 31109842 PMCID: PMC6996285 DOI: 10.1016/j.ultrasmedbio.2018.12.015] [Citation(s) in RCA: 231] [Impact Index Per Article: 46.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/06/2018] [Revised: 12/13/2018] [Accepted: 12/29/2018] [Indexed: 05/03/2023]
Abstract
Ultrasonic neuromodulation is a rapidly growing field, in which low-intensity ultrasound (US) is delivered to nervous system tissue, resulting in transient modulation of neural activity. This review summarizes the findings in the central and peripheral nervous systems from mechanistic studies in cell culture to cognitive behavioral studies in humans. The mechanisms by which US mechanically interacts with neurons and could affect firing are presented. An in-depth safety assessment of current studies shows that parameters for the human studies fall within the safety envelope for US imaging. Challenges associated with accurately targeting US and monitoring the response are described. In conclusion, the literature supports the use of US as a safe, non-invasive brain stimulation modality with improved spatial localization and depth targeting compared with alternative methods. US neurostimulation has the potential to be used both as a scientific instrument to investigate brain function and as a therapeutic modality to modulate brain activity.
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Affiliation(s)
- Joseph Blackmore
- Institute of Biomedical Engineering, Department of Engineering Science, University of Oxford, Roosevelt Drive, Oxford, UK
| | - Shamit Shrivastava
- Institute of Biomedical Engineering, Department of Engineering Science, University of Oxford, Roosevelt Drive, Oxford, UK
| | - Jerome Sallet
- Wellcome Centre for Integrative Nueroimaging, Department of Experimental Psychology, University of Oxford, Oxford, UK
| | - Chris R Butler
- Nuffield Department of Clinical Neurosciences, John Radcliffe Hospital, Oxford, UK
| | - Robin O Cleveland
- Institute of Biomedical Engineering, Department of Engineering Science, University of Oxford, Roosevelt Drive, Oxford, UK.
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19
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Okamura E. Solution NMR to Quantify Mobility in Membranes: Diffusion, Protrusion, and Drug Transport Processes. Chem Pharm Bull (Tokyo) 2019; 67:308-315. [DOI: 10.1248/cpb.c18-00946] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
Affiliation(s)
- Emiko Okamura
- Faculty of Pharmaceutical Sciences, Himeji Dokkyo University
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20
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Parameterization of a coarse-grained model of cholesterol with point-dipole electrostatics. J Comput Aided Mol Des 2018; 32:1259-1271. [DOI: 10.1007/s10822-018-0164-4] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/24/2018] [Accepted: 09/12/2018] [Indexed: 12/14/2022]
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21
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Simon C, Caorsi V, Campillo C, Sykes C. Interplay between membrane tension and the actin cytoskeleton determines shape changes. Phys Biol 2018; 15:065004. [DOI: 10.1088/1478-3975/aad1ab] [Citation(s) in RCA: 15] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
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22
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Shew CY, Oda S, Yoshikawa K. Localization switching of a large object in a crowded cavity: A rigid/soft object prefers surface/inner positioning. J Chem Phys 2018; 147:204901. [PMID: 29195278 DOI: 10.1063/1.5000762] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/31/2023] Open
Abstract
For living cells in the real world, a large organelle is commonly positioned in the inner region away from membranes, such as the nucleus of eukaryotic cells, the nucleolus of nuclei, mitochondria, chloroplast, Golgi body, etc. It contradicts the expectation by the current depletion-force theory in that the larger particle should be excluded from the inner cell space onto cell boundaries in a crowding media. Here we simply model a sizable organelle as a soft-boundary large particle allowing crowders, which are smaller hard spheres in the model, to intrude across its boundary. The results of Monte Carlo simulation indicate that the preferential location of the larger particle switches from the periphery into the inner region of the cavity by increasing its softness. An integral equation theory is further developed to account for the structural features of the model, and the theoretical predictions are found consistent with our simulation results.
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Affiliation(s)
- Chwen-Yang Shew
- Ph.D. Program in Chemistry, The Graduate Center of the City University of New York, New York, New York 10016, USA and Department of Chemistry, College of Staten Island, Staten Island, New York 10314, USA
| | - Soutaro Oda
- Faculty of Life and Medical Sciences, Doshisha University, Kyotanabe 610-0394, Japan
| | - Kenichi Yoshikawa
- Faculty of Life and Medical Sciences, Doshisha University, Kyotanabe 610-0394, Japan
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23
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Alipour E, Halverson D, McWhirter S, Walker GC. Phospholipid Bilayers: Stability and Encapsulation of Nanoparticles. Annu Rev Phys Chem 2017; 68:261-283. [DOI: 10.1146/annurev-physchem-040215-112634] [Citation(s) in RCA: 27] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Affiliation(s)
- Elnaz Alipour
- Department of Chemistry, University of Toronto, Toronto, Ontario M5S 3H6, Canada;, , ,
| | - Duncan Halverson
- Department of Chemistry, University of Toronto, Toronto, Ontario M5S 3H6, Canada;, , ,
| | - Samantha McWhirter
- Department of Chemistry, University of Toronto, Toronto, Ontario M5S 3H6, Canada;, , ,
| | - Gilbert C. Walker
- Department of Chemistry, University of Toronto, Toronto, Ontario M5S 3H6, Canada;, , ,
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24
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Vorselen D, MacKintosh FC, Roos WH, Wuite GJ. Competition between Bending and Internal Pressure Governs the Mechanics of Fluid Nanovesicles. ACS NANO 2017; 11:2628-2636. [PMID: 28273422 PMCID: PMC5371924 DOI: 10.1021/acsnano.6b07302] [Citation(s) in RCA: 63] [Impact Index Per Article: 9.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/29/2016] [Accepted: 03/08/2017] [Indexed: 05/24/2023]
Abstract
Nanovesicles (∼100 nm) are ubiquitous in cell biology and an important vector for drug delivery. Mechanical properties of vesicles are known to influence cellular uptake, but the mechanism by which deformation dynamics affect internalization is poorly understood. This is partly due to the fact that experimental studies of the mechanics of such vesicles remain challenging, particularly at the nanometer scale where appropriate theoretical models have also been lacking. Here, we probe the mechanical properties of nanoscale liposomes using atomic force microscopy (AFM) indentation. The mechanical response of the nanovesicles shows initial linear behavior and subsequent flattening corresponding to inward tether formation. We derive a quantitative model, including the competing effects of internal pressure and membrane bending, that corresponds well to these experimental observations. Our results are consistent with a bending modulus of the lipid bilayer of ∼14kbT. Surprisingly, we find that vesicle stiffness is pressure dominated for adherent vesicles under physiological conditions. Our experimental method and quantitative theory represents a robust approach to study the mechanics of nanoscale vesicles, which are abundant in biology, as well as being of interest for the rational design of liposomal vectors for drug delivery.
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Affiliation(s)
- Daan Vorselen
- Department
of Physics and Astronomy and LaserLab, Vrije
Universiteit Amsterdam, Amsterdam, 1081 HV, The Netherlands
- Department
of Oral Function and Restorative Dentistry, Academic Centre for Dentistry
Amsterdam (ACTA), Research Institute MOVE, University of Amsterdam and Vrije Universiteit Amsterdam, Amsterdam, 1081 LA, The Netherlands
| | - Fred C. MacKintosh
- Department
of Physics and Astronomy and LaserLab, Vrije
Universiteit Amsterdam, Amsterdam, 1081 HV, The Netherlands
- Departments
of Chemical & Biomolecular Engineering, Chemistry, and Physics
& Astronomy, Rice University, Houston, Texas 77005, United States
- Center
for Theoretical Biophysics, Rice University, Houston, Texas 77030, United States
| | - Wouter H. Roos
- Department
of Physics and Astronomy and LaserLab, Vrije
Universiteit Amsterdam, Amsterdam, 1081 HV, The Netherlands
- Moleculaire
Biofysica, Zernike Instituut, Rijksuniversiteit
Groningen, Nijenborgh
4, Groningen, 9747 AG, The Netherlands
| | - Gijs J.L. Wuite
- Department
of Physics and Astronomy and LaserLab, Vrije
Universiteit Amsterdam, Amsterdam, 1081 HV, The Netherlands
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25
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Inda ME, Oliveira RG, de Mendoza D, Cybulski LE. The Single Transmembrane Segment of Minimal Sensor DesK Senses Temperature via a Membrane-Thickness Caliper. J Bacteriol 2016; 198:2945-2954. [PMID: 27528507 PMCID: PMC5055599 DOI: 10.1128/jb.00431-16] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/06/2016] [Accepted: 08/08/2016] [Indexed: 02/07/2023] Open
Abstract
Thermosensors detect temperature changes and trigger cellular responses crucial for survival at different temperatures. The thermosensor DesK is a transmembrane (TM) histidine kinase which detects a decrease in temperature through its TM segments (TMS). Here, we address a key issue: how a physical stimulus such as temperature can be converted into a cellular response. We show that the thickness of Bacillus lipid membranes varies with temperature and that such variations can be detected by DesK with great precision. On the basis of genetic studies and measurements of in vitro activity of a DesK construct with a single TMS (minimal sensor DesK [MS-DesK]), reconstituted in liposomes, we propose an interplay mechanism directed by a conserved dyad, phenylalanine 8-lysine 10. This dyad is critical to anchor the only transmembrane segment of the MS-DesK construct to the extracellular water-lipid interphase and is required for the transmembrane segment of MS-DesK to function as a caliper for precise measurement of membrane thickness. The data suggest that positively charged lysine 10, which is located in the hydrophobic core of the membrane but is close to the water-lipid interface, pulls the transmembrane region toward the water phase to localize its charge at the interface. Nevertheless, the hydrophobic residue phenylalanine 8, located at the N-terminal extreme of the TMS, has a strong tendency to remain in the lipid phase, impairing access of lysine 10 to the water phase. The outcome of this interplay is a fine-tuned sensitivity to membrane thickness that elicits conformational changes that favor different signaling states of the protein. IMPORTANCE The ability to sense and respond to extracellular signals is essential for cell survival. One example is the cellular response to temperature variation. How do cells "sense" temperature changes? It has been proposed that the bacterial thermosensor DesK acts as a molecular caliper measuring membrane thickness variations that would occur as a consequence of temperature changes and activates a pathway to restore membrane fluidity at low temperature. Here, we demonstrated that membrane thickness variations do occur at physiological temperatures by directly measuring Bacillus lipid membrane thickness. We also dissected the N-terminal sensing motif of MS-DesK at the molecular-biophysical level and found that the dyad phenylalanine-lysine at the water-lipid phase is critical for achievement of a fine-tuned sensitivity to temperature.
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Affiliation(s)
- Maria E Inda
- Departamento de Microbiología, Facultad de Ciencias Bioquímicas y Farmacéuticas, Universidad Nacional de Rosario and Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET), Suipacha, Rosario, Argentina
| | - Rafael G Oliveira
- Centro de Investigaciones en Química Biológica de Córdoba, CIQUIBIC, CONICET, and Departamento de Química Biológica, Facultad de Ciencias Químicas, Universidad Nacional de Córdoba, Ciudad Universitaria, Córdoba, Argentina
| | - Diego de Mendoza
- Instituto de Biología Molecular y Celular de Rosario, CONICET, Universidad Nacional de Rosario, Predio CONICET, Rosario, Argentina
| | - Larisa E Cybulski
- Departamento de Microbiología, Facultad de Ciencias Bioquímicas y Farmacéuticas, Universidad Nacional de Rosario and Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET), Suipacha, Rosario, Argentina
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26
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Durfee PN, Lin YS, Dunphy DR, Muñiz AJ, Butler KS, Humphrey KR, Lokke AJ, Agola JO, Chou SS, Chen IM, Wharton W, Townson JL, Willman CL, Brinker CJ. Mesoporous Silica Nanoparticle-Supported Lipid Bilayers (Protocells) for Active Targeting and Delivery to Individual Leukemia Cells. ACS NANO 2016; 10:8325-45. [PMID: 27419663 DOI: 10.1021/acsnano.6b02819] [Citation(s) in RCA: 140] [Impact Index Per Article: 17.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/13/2023]
Abstract
Many nanocarrier cancer therapeutics currently under development, as well as those used in the clinical setting, rely upon the enhanced permeability and retention (EPR) effect to passively accumulate in the tumor microenvironment and kill cancer cells. In leukemia, where leukemogenic stem cells and their progeny circulate within the peripheral blood or bone marrow, the EPR effect may not be operative. Thus, for leukemia therapeutics, it is essential to target and bind individual circulating cells. Here, we investigate mesoporous silica nanoparticle (MSN)-supported lipid bilayers (protocells), an emerging class of nanocarriers, and establish the synthesis conditions and lipid bilayer composition needed to achieve highly monodisperse protocells that remain stable in complex media as assessed in vitro by dynamic light scattering and cryo-electron microscopy and ex ovo by direct imaging within a chick chorioallantoic membrane (CAM) model. We show that for vesicle fusion conditions where the lipid surface area exceeds the external surface area of the MSN and the ionic strength exceeds 20 mM, we form monosized protocells (polydispersity index <0.1) on MSN cores with varying size, shape, and pore size, whose conformal zwitterionic supported lipid bilayer confers excellent stability as judged by circulation in the CAM and minimal opsonization in vivo in a mouse model. Having established protocell formulations that are stable colloids, we further modified them with anti-EGFR antibodies as targeting agents and reverified their monodispersity and stability. Then, using intravital imaging in the CAM, we directly observed in real time the progression of selective targeting of individual leukemia cells (using the established REH leukemia cell line transduced with EGFR) and delivery of a model cargo. Overall, we have established the effectiveness of the protocell platform for individual cell targeting and delivery needed for leukemia and other disseminated disease.
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Affiliation(s)
- Paul N Durfee
- Chemical and Biological Engineering, University of New Mexico , 210 University Blvd NE, Albuquerque, New Mexico 87131-0001, United States
- Center for Micro-Engineered Materials, Advanced Materials Laboratory, University of New Mexico , MSC04 2790, 1001 University Blvd SE, Suite 103, Albuquerque, New Mexico 87106, United States
| | - Yu-Shen Lin
- Internal Medicine, University of New Mexico , MSC10 5550, 1 University of New Mexico, Albuquerque, New Mexico 87131, United States
- Oncothyreon, Inc. , 2601 Fourth Avenue, Seattle, Washington 98121-3222, United States
| | - Darren R Dunphy
- Center for Micro-Engineered Materials, Advanced Materials Laboratory, University of New Mexico , MSC04 2790, 1001 University Blvd SE, Suite 103, Albuquerque, New Mexico 87106, United States
| | - Ayşe J Muñiz
- Health Sciences Center, Biochemistry and Molecular Biology, University of New Mexico , MSC08 4670, 1 University of New Mexico, Albuquerque, New Mexico 87131-5001, United States
| | - Kimberly S Butler
- Center for Micro-Engineered Materials, Advanced Materials Laboratory, University of New Mexico , MSC04 2790, 1001 University Blvd SE, Suite 103, Albuquerque, New Mexico 87106, United States
| | - Kevin R Humphrey
- Biomedical Engineering, Vanderbilt University , 2301 Vanderbilt Place, Nashville, Tennessee 37235-1826, United States
| | - Amanda J Lokke
- Health Sciences Center, Biochemistry and Molecular Biology, University of New Mexico , MSC08 4670, 1 University of New Mexico, Albuquerque, New Mexico 87131-5001, United States
| | - Jacob O Agola
- Center for Micro-Engineered Materials, Advanced Materials Laboratory, University of New Mexico , MSC04 2790, 1001 University Blvd SE, Suite 103, Albuquerque, New Mexico 87106, United States
| | - Stanley S Chou
- Advanced Materials Laboratory, Sandia National Laboratories , 1001 University Blvd. SE, Suite 100, Albuquerque, New Mexico 87106, United States
| | - I-Ming Chen
- Department of Pathology, University of New Mexico , MSC08 4640, 1 University of New Mexico, Albuquerque, New Mexico 87131-0001, United States
- Comprehensive Cancer Center, The University of New Mexico , MSC07 4025, 1 University of New Mexico, 1201 Camino de Salud NE, Albuquerque, New Mexico 87131-0001, United States
| | - Walker Wharton
- Department of Pathology, University of New Mexico , MSC08 4640, 1 University of New Mexico, Albuquerque, New Mexico 87131-0001, United States
- Comprehensive Cancer Center, The University of New Mexico , MSC07 4025, 1 University of New Mexico, 1201 Camino de Salud NE, Albuquerque, New Mexico 87131-0001, United States
| | - Jason L Townson
- Internal Medicine, University of New Mexico , MSC10 5550, 1 University of New Mexico, Albuquerque, New Mexico 87131, United States
- Oncothyreon, Inc. , 2601 Fourth Avenue, Seattle, Washington 98121-3222, United States
| | - Cheryl L Willman
- Department of Pathology, University of New Mexico , MSC08 4640, 1 University of New Mexico, Albuquerque, New Mexico 87131-0001, United States
- Comprehensive Cancer Center, The University of New Mexico , MSC07 4025, 1 University of New Mexico, 1201 Camino de Salud NE, Albuquerque, New Mexico 87131-0001, United States
| | - C Jeffrey Brinker
- Chemical and Biological Engineering, University of New Mexico , 210 University Blvd NE, Albuquerque, New Mexico 87131-0001, United States
- Center for Micro-Engineered Materials, Advanced Materials Laboratory, University of New Mexico , MSC04 2790, 1001 University Blvd SE, Suite 103, Albuquerque, New Mexico 87106, United States
- Advanced Materials Laboratory, Sandia National Laboratories , 1001 University Blvd. SE, Suite 100, Albuquerque, New Mexico 87106, United States
- Comprehensive Cancer Center, The University of New Mexico , MSC07 4025, 1 University of New Mexico, 1201 Camino de Salud NE, Albuquerque, New Mexico 87131-0001, United States
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27
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Lombardo D, Calandra P, Barreca D, Magazù S, Kiselev MA. Soft Interaction in Liposome Nanocarriers for Therapeutic Drug Delivery. NANOMATERIALS (BASEL, SWITZERLAND) 2016; 6:E125. [PMID: 28335253 PMCID: PMC5224599 DOI: 10.3390/nano6070125] [Citation(s) in RCA: 90] [Impact Index Per Article: 11.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 04/06/2016] [Revised: 06/14/2016] [Accepted: 06/17/2016] [Indexed: 01/19/2023]
Abstract
The development of smart nanocarriers for the delivery of therapeutic drugs has experienced considerable expansion in recent decades, with the development of new medicines devoted to cancer treatment. In this respect a wide range of strategies can be developed by employing liposome nanocarriers with desired physico-chemical properties that, by exploiting a combination of a number of suitable soft interactions, can facilitate the transit through the biological barriers from the point of administration up to the site of drug action. As a result, the materials engineer has generated through the bottom up approach a variety of supramolecular nanocarriers for the encapsulation and controlled delivery of therapeutics which have revealed beneficial developments for stabilizing drug compounds, overcoming impediments to cellular and tissue uptake, and improving biodistribution of therapeutic compounds to target sites. Herein we present recent advances in liposome drug delivery by analyzing the main structural features of liposome nanocarriers which strongly influence their interaction in solution. More specifically, we will focus on the analysis of the relevant soft interactions involved in drug delivery processes which are responsible of main behaviour of soft nanocarriers in complex physiological fluids. Investigation of the interaction between liposomes at the molecular level can be considered an important platform for the modeling of the molecular recognition processes occurring between cells. Some relevant strategies to overcome the biological barriers during the drug delivery of the nanocarriers are presented which outline the main structure-properties relationships as well as their advantages (and drawbacks) in therapeutic and biomedical applications.
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Affiliation(s)
- Domenico Lombardo
- National Research Council, Institute for Chemical and Physical Processes, Messina 98158, Italy.
| | - Pietro Calandra
- National Research Council, Institute of Nanostructured Materials, Roma 00015, Italy.
| | - Davide Barreca
- Department of Chemical Sciences, biological, pharmaceutical and environmental, University of Messina, Messina 98166, Italy.
| | - Salvatore Magazù
- Department of Physics and Earth Sciences, University of Messina, Messina 98166, Italy.
| | - Mikhail A Kiselev
- Frank Laboratory of Neutron Physics, Joint Institute for Nuclear Research, Dubna, Moscow 141980, Russia.
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Deseri L, Pollaci P, Zingales M, Dayal K. Fractional hereditariness of lipid membranes: Instabilities and linearized evolution. J Mech Behav Biomed Mater 2015; 58:11-27. [PMID: 26897568 DOI: 10.1016/j.jmbbm.2015.09.021] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/01/2015] [Revised: 09/15/2015] [Accepted: 09/18/2015] [Indexed: 11/15/2022]
Abstract
In this work lipid ordering phase changes arising in planar membrane bilayers is investigated both accounting for elasticity alone and for effective viscoelastic response of such assemblies. The mechanical response of such membranes is studied by minimizing the Gibbs free energy which penalizes perturbations of the changes of areal stretch and their gradients only (Deseri and Zurlo, 2013). As material instabilities arise whenever areal stretches characterizing homogeneous configurations lie inside the spinoidal zone of the free energy density, bifurcations from such configurations are shown to occur as oscillatory perturbations of the in-plane displacement. Experimental observations (Espinosa et al., 2011) show a power-law in-plane viscous behavior of lipid structures allowing for an effective viscoelastic behavior of lipid membranes, which falls in the framework of Fractional Hereditariness. A suitable generalization of the variational principle invoked for the elasticity is applied in this case, and the corresponding Euler-Lagrange equation is found together with a set of boundary and initial conditions. Separation of variables allows for showing how Fractional Hereditariness owes bifurcated modes with a larger number of spatial oscillations than the corresponding elastic analog. Indeed, the available range of areal stresses for material instabilities is found to increase with respect to the purely elastic case. Nevertheless, the time evolution of the perturbations solving the Euler-Lagrange equation above exhibits time-decay and the large number of spatial oscillation slowly relaxes, thereby keeping the features of a long-tail type time-response.
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Affiliation(s)
- L Deseri
- Dept. of Mechanical Engineering and Materials Science-MEMS-Swanson School of Engineering, University of Pittsburgh, 3700 O'Hara Street, Pittsburgh, PA 15261, USA; Dept. of Civil Environmental and Mechanical Engineering-DICAM, University of Trento, via Mesiano, 77 38123 Trento, Italy; Dept. of Mechanical Engineering, 5000 Forbes Av., Pittsburgh PA 15213-3890, USA; Dept. of Civil and Environmental Engineering, Carnegie Mellon University, 5000 Forbes Av., Pittsburgh PA 15213-3890, USA; The Methodist Hospital Research Institute-TMHRI-Department of Nanomedicine, 6565 Fannin St., MS B-490, Houston, TX 77030, USA.
| | - P Pollaci
- Dept. of Civil Environmental and Mechanical Engineering-DICAM, University of Trento, via Mesiano, 77 38123 Trento, Italy.
| | - M Zingales
- Civil, Environmental, Aerospace Engineering and Material Science, University of Palermo, Viale delle Science, Edificio 8, 90100 Palermo, Italy; Lab, Mediterranean Center of Human Health and Advanced Biotechnologies, University of Palermo, Viale delle Science, Edificio 8, 90100 Palermo, Italy.
| | - K Dayal
- Dept. of Civil and Environmental Engineering, Carnegie Mellon University, 5000 Forbes Av., Pittsburgh PA 15213-3890, USA.
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Kato N, Ishijima A, Inaba T, Nomura F, Takeda S, Takiguchi K. Effects of lipid composition and solution conditions on the mechanical properties of membrane vesicles. MEMBRANES 2015; 5:22-47. [PMID: 25611306 PMCID: PMC4384090 DOI: 10.3390/membranes5010022] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 08/28/2014] [Revised: 01/07/2015] [Accepted: 01/12/2015] [Indexed: 01/01/2023]
Abstract
The mechanical properties of cell-sized giant unilamellar liposomes were studied by manipulating polystyrene beads encapsulated within the liposomes using double-beam laser tweezers. Mechanical forces were applied to the liposomes from within by moving the beads away from each other, which caused the liposomes to elongate. Subsequently, a tubular membrane projection was generated in the tip at either end of the liposome, or the bead moved out from the laser trap. The force required for liposome transformation reached maximum strength just before formation of the projection or the moving out of the bead. By employing this manipulation system, we investigated the effects of membrane lipid compositions and environment solutions on the mechanical properties. With increasing content of acidic phospholipids, such as phosphatidylglycerol or phosphatidic acid, a larger strength of force was required for the liposome transformation. Liposomes prepared with a synthetic dimyristoylphosphatidylcholine, which has uniform hydrocarbon chains, were transformed easily compared with liposomes prepared using natural phosphatidylcholine. Surprisingly, bovine serum albumin or fetuin (soluble proteins that do not bind to membranes) decreased liposomal membrane rigidity, whereas the same concentration of sucrose showed no particular effect. These results show that the mechanical properties of liposomes depend on their lipid composition and environment.
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Affiliation(s)
- Nobuhiko Kato
- Division of Biological Science, Graduate School of Science, Nagoya University, Chikusa-ku, Nagoya 464-8602, Japan.
| | - Akihiko Ishijima
- Institute of Multidisciplinary, Research for Advanced Materials, Tohoku University, 2-1-1, Katahira, Aoba-ku, Sendai 980-8577, Japan.
| | - Takehiko Inaba
- Lipid Biology Laboratory, RIKEN, 2-1 Hirosawa, Wako, Saitama 351-0198, Japan.
| | - Fumimasa Nomura
- Department of Biomedical Information, Division of Biosystems, Institute of Biomaterials and Bioengineering, Tokyo Medical and Dental University, 2-3-10 Kanda-Surugadai, Chiyoda, Tokyo 101-0062, Japan.
| | - Shuichi Takeda
- Division of Biological Science, Graduate School of Science, Nagoya University, Chikusa-ku, Nagoya 464-8602, Japan.
| | - Kingo Takiguchi
- Division of Biological Science, Graduate School of Science, Nagoya University, Chikusa-ku, Nagoya 464-8602, Japan.
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Affiliation(s)
- Diego de Mendoza
- Instituto de Biología Molecular y Celular de Rosario (IBR-CONICET) and Departamento de Microbiología, Facultad de Ciencias Bioquímicas y Farmacéuticas, Universidad Nacional de Rosario, 2000-Rosario, Argentina;
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Abstract
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Linactants,
molecules that preferentially localize at the boundary
of lipid membrane domains, are attracting considerable attention in
recent years due to the recognition that they might regulate lipid-phase
separation and thereby modulate membrane morphology. Recent studies
have also shown that clustering of some line active agents enhances
their ability to modulate membrane curvature. However, the molecular
origin of this phenomenon, and the degree to which it impacts biological
membranes, remains poorly understood. In this work, we have investigated
how linactants induce shape change in multidomain small unilamallar
vesicles (SUVs) using extensive dissipative particle dynamics simulations.
The linactant was modeled as a two-tailed hybrid lipid with the two
tails differing in preference for different lipid domains. We found
that addition of a small amount of linactants (∼1%) to a two-domain
vesicle leads to substantial reduction in the line tension and neck
curvature at the domain boundary. Using cross-linking as a surrogate
for clustering, we further show that linactant clusters substantially
enhance the boundary preference and therefore the reduction in neck
curvature. Moreover, on the basis of analyses of the corresponding
changes in the membrane energetics, we highlight how linactants might
stabilize nanoscale domains. These results have important implications
for the potential existence and physical explanations of nanosized
domains in biological membranes.
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Affiliation(s)
- Zhenlong Li
- Department of Integrative Biology and Pharmacology, The University of Texas Medical School at Houston , 6431 Fannin Street, Houston, Texas 77030, United States
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32
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Theoretical calculation of bending stiffness of alveolar wall. J Membr Biol 2014; 246:981-4. [PMID: 24121628 DOI: 10.1007/s00232-013-9602-3] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/05/2013] [Accepted: 09/27/2013] [Indexed: 10/26/2022]
Abstract
The bending stiffness of the alveolar wall is theoretically analyzed in this study through analytical modeling. First, the alveolar wall facet and its characteristics were geometrically simplified and then modeled using known physical laws. Bending stiffness is shown to be dependent on alveolar wall thickness, density, Poisson's ratio and speed of the longitudinal wave. The normal bending stiffness of the alveolar wall was further determined. For the adult human, the normal bending stiffness is calculated to be 71.0-414.7 nNm, while for the adult mouse it is 1.9-30.0 nNm. The results of this study can be used as a reference for future pulmonary emphysema and fibrosis studies, as the bending stiffness of alveolar wall will be lower and higher, respectively; than the theoretically determined normal values.
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Krishnamurthy R. Role of pK(a) of nucleobases in the origins of chemical evolution. Acc Chem Res 2012; 45:2035-44. [PMID: 22533519 PMCID: PMC3525050 DOI: 10.1021/ar200262x] [Citation(s) in RCA: 88] [Impact Index Per Article: 7.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/15/2011] [Indexed: 11/30/2022]
Abstract
The formation of canonical base pairs through Watson-Crick hydrogen bonding sits at the heart of the genetic apparatus. The specificity of the base pairing of adenine with thymine/uracil and guanine with cytosine preserves accurate information for the biochemical blueprint and replicates the instructions necessary for carrying out biological function. The chemical evolution question of how these five canonical nucleobases were selected over various other possibilities remains intriguing. Since these and alternative nucleobases would have been available for chemical evolution, the reasons for the emergence of this system appear to be primarily functional. While investigating the base-pairing properties of structural nucleic acid analogs, we encountered a relationship between the pK(a) of a series of nonstandard (and canonical) nucleobases and the pH of the aqueous medium. This relationship appeared to correspond with the propensity of these molecules to self-assemble via Watson-Crick-type base-pairing interactions. A simple correlation of the "magnitude of the difference between the pK(a) and pH" (pK(a)-pH correlation) enables a general prediction of which types of heterocyclic recognition elements form hydrogen-bonded base pairs in aqueous media. Using the pK(a)-pH relationship, we can rationalize why nature chose the canonical nucleobases in terms of hydrophobic and hydrophilic interactions, and further extrapolate its significance within the context of chemical evolution. The connection between the physicochemical properties of bioorganic compounds and the interactions with their aqueous environment directly affects structure and function, at both a molecular and a supramolecular level. A general structure-function pattern emerges in biomolecules and biopolymers in aqueous media near neutral pH. A pK(a) - pH < 2 generally prompts catalytic functions, central to metabolism, but a difference in pK(a) - pH > 2 seems to result in the emergence of structure, central to replication. While this general trend is observed throughout extant biology, it could have also been an important factor in chemical evolution.
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Affiliation(s)
- Ramanarayanan Krishnamurthy
- Department of Chemistry, The Scripps Research Institute, 10550 North Torrey Pines Road, La Jolla, California 92037, USA
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Schrader W, Behrends R, Kaatze U. Cholesterol-Induced Variations in the Domain Structure Fluctuations and Microdynamics of Lipid Membranes. J Phys Chem B 2012; 116:2446-54. [DOI: 10.1021/jp2106007] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
Affiliation(s)
- W. Schrader
- Drittes Physikalisches Institut, Georg-August-Universität Göttingen, Friedrich-Hund-Platz 1, 37077 Göttingen,
Germany
| | - R. Behrends
- Drittes Physikalisches Institut, Georg-August-Universität Göttingen, Friedrich-Hund-Platz 1, 37077 Göttingen,
Germany
| | - U. Kaatze
- Drittes Physikalisches Institut, Georg-August-Universität Göttingen, Friedrich-Hund-Platz 1, 37077 Göttingen,
Germany
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35
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Abstract
Cell adhesion is an essential prerequisite for survival, communication, and navigation of cells in organisms. It is maintained by the organized binding of molecules from the cell membrane to the extracellular space. This chapter focuses on direct measurements of cellular binding strength at the level of single adhesion molecules. Using atomic force microscopy-based force measurements, adhesion strength can be monitored as a function of adhesion time and environmental conditions. In this way, cellular adhesion strategies like changes in affinity and avidity of adhesion molecules (e.g., integrins) are characterized as well as the molecular arrangement of adhesion molecules in the cell membrane (e.g., molecular clusters, focal adhesion spots, and linkage to the cytoskeleton or tether). Some prominent values for the data evaluation are presented as well as constraints and preparative techniques for successful cell adhesion force experiments.
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Affiliation(s)
- Martin Benoit
- Institute for Materials Science, University of Kiel, Kiel, Germany.
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36
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38
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Maggio B, Borioli GA, Del Boca M, De Tullio L, Fanani ML, Oliveira RG, Rosetti CM, Wilke N. Composition-driven surface domain structuring mediated by sphingolipids and membrane-active proteins. Above the nano- but under the micro-scale: mesoscopic biochemical/structural cross-talk in biomembranes. Cell Biochem Biophys 2007; 50:79-109. [PMID: 17968678 DOI: 10.1007/s12013-007-9004-1] [Citation(s) in RCA: 26] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 09/28/2007] [Indexed: 10/22/2022]
Abstract
Biomembranes contain a wide variety of lipids and proteins within an essentially two-dimensional structure. The coexistence of such a large number of molecular species causes local tensions that frequently relax into a phase or compositional immiscibility along the lateral and transverse planes of the interface. As a consequence, a substantial microheterogeneity of the surface topography develops and that depends not only on the lipid-protein composition, but also on the lateral and transverse tensions generated as a consequence of molecular interactions. The presence of proteins, and immiscibility among lipids, constitute major perturbing factors for the membrane sculpturing both in terms of its surface topography and dynamics. In this work, we will summarize some recent evidences for the involvement of membrane-associated, both extrinsic and amphitropic, proteins as well as membrane-active phosphohydrolytic enzymes and sphingolipids in driving lateral segregation of phase domains thus determining long-range surface topography.
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Affiliation(s)
- Bruno Maggio
- Departamento de Química Biológica, Facultad de Ciencias Químicas, Centro de Investigaciones en Química Biológica de Córdoba, Universidad Nacional de Córdoba - CONICET, Argentina.
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40
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Brannigan G, Lin LCL, Brown FLH. Implicit solvent simulation models for biomembranes. EUROPEAN BIOPHYSICS JOURNAL: EBJ 2005; 35:104-24. [PMID: 16187129 DOI: 10.1007/s00249-005-0013-y] [Citation(s) in RCA: 124] [Impact Index Per Article: 6.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/20/2005] [Revised: 08/03/2005] [Accepted: 08/12/2005] [Indexed: 11/25/2022]
Abstract
Fully atomic simulation strategies are infeasible for the study of many processes of interest to membrane biology, biophysics and biochemistry. We review various coarse-grained simulation methodologies with special emphasis on methods and models that do not require the explicit simulation of water. Examples from our own research demonstrate that such models have potential for simulating a variety of biologically relevant phenomena at the membrane surface.
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Affiliation(s)
- Grace Brannigan
- Department of Physics and Astronomy, University of California, Santa Barbara, CA 93106-9530, USA
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41
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Kakorin S, Brinkmann U, Neumann E. Cholesterol reduces membrane electroporation and electric deformation of small bilayer vesicles. Biophys Chem 2005; 117:155-71. [PMID: 15923075 DOI: 10.1016/j.bpc.2005.05.001] [Citation(s) in RCA: 22] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/15/2005] [Revised: 05/04/2005] [Accepted: 05/04/2005] [Indexed: 11/27/2022]
Abstract
Electric fields, similar in the order of magnitude of the natural membrane fields of cellular lipid/protein membranes, and chemical relaxation spectrometry can be used as tools to quantify the rigidifying effect of cholesterol in membranes. Small unilamellar vesicles of radius a=50+/-3 nm, prepared form phosphatidylcholine, phosphatidylserine and phosphatidyl-glycerol in the molar ratio 1:1:1 and containing the optical lipid probe molecule 2-(3-diphenyl-hexatrienyl) propanoyl)-1-palmitoyl-sn-glycerol-3-phosphocholine (beta-DPH pPC), serve as examples for curved lipid membranes. The data of electrooptical turbidity and absorbance relaxations at the wavelength lambda=365 nm are analysed in terms of membrane bending rigidity kappa and membrane stretching modulus K. Both kappa and K increase with increasing mole fraction x of cholesterol up to x=0.5. The cholesterol induced denser packing of the lipids reduces the extent of both membrane electroporation (ME) and electroelongation of the vesicles. Further on, cholesterol in the lipid phase and sucrose in the aqueous suspension reduce the extent of membrane undulation and electro-stretching.
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Affiliation(s)
- Sergej Kakorin
- Physical and Biophysical Chemistry, Faculty of Chemistry, University of Bielefeld, P.O. Box 100 131, D-33501 Bielefeld, Germany
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42
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Daghastanli KRP, Ferreira RB, Thedei G, Maggio B, Ciancaglini P. Lipid composition-dependent incorporation of multiple membrane proteins into liposomes. Colloids Surf B Biointerfaces 2004; 36:127-37. [PMID: 15276628 DOI: 10.1016/j.colsurfb.2004.03.015] [Citation(s) in RCA: 23] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/25/2003] [Accepted: 03/29/2004] [Indexed: 10/26/2022]
Abstract
Membrane proteins from bacteria Pasteurella multocida were used as a model for studying its incorporation into liposomes. An important step to achieve efficient high yield protein incorporation in proteoliposomes is the study of the more suitable lipid composition. To this end, we compared the amount of total protein, reconstituted by co-solubilization methods, into liposomes of phospholipids with different polar head groups and acyl chain lengths. The liposomes and proteoliposomes were characterised by isopycnic centrifugation in sucrose gradient and by dynamic light scattering. Experimental and theoretical results were compared considering the effects exerted through the hydrocarbon chain length, volume, and optimal cross-sectional area of the phospholipid (combined in the geometrical critical packing parameter, lipid-protein matching), critical spontaneous radius of curvature of the bilayer vesicle, phase transition temperature of the lipid and ratio of lipid-protein molecules present in the vesicles. The highest incorporation of multiple proteins was found with dipalmitoylphosphatidylcholine (DPPC), reaching a yield of 93% compared to the lower relative amounts incorporated in proteoliposomes of the other lipids. The incorporation of multiple proteins induces a proportional enhancement of vesicular dimension, since DPPC-proteoliposomes have an average diameter of 1850A, compared to the 1430A for pure DPPC vesicles.
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Affiliation(s)
- Katia R P Daghastanli
- Departamento de Química, Faculdade de Filosofia Ciências e Letras de Ribeirão Preto/USP, Avenida Bandeirantes 3900, Ribeirão Preto, SP 14040-901, Brazil
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43
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Schäffer E, Thiele U. Dynamic domain formation in membranes: thickness-modulation-induced phase separation. THE EUROPEAN PHYSICAL JOURNAL. E, SOFT MATTER 2004; 14:169-175. [PMID: 15254836 DOI: 10.1140/epje/i2003-10147-x] [Citation(s) in RCA: 15] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/24/2023]
Abstract
A simple model investigates the amplification of fluctuations on membranes constituted of two lipids having different lengths. Van der Waals and electrostatic interactions across the lipid bilayer result in a destabilization favoring thickness variations of the membrane. Close to spontaneous demixing of the two components, the additional gain in free energy due to thickness undulations shifts the stability boundary which promotes phase separation into domains. Interestingly, this effect can be induced by an applied electric field or membrane potential. In biological systems, the dynamic model presented here indicates that electric fields might be important for controlling phase separation and the formation of domains called "rafts".
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Affiliation(s)
- E Schäffer
- Max Planck Institute of Molecular Cell Biology and Genetics, Pfotenhauerstrasse 108, D-01307, Dresden, Germany.
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44
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Schneider MF, Zantl R, Gege C, Schmidt RR, Rappolt M, Tanaka M. Hydrophilic/Hydrophobic balance determines morphology of glycolipids with oligolactose headgroups. Biophys J 2003; 84:306-13. [PMID: 12524284 PMCID: PMC1302612 DOI: 10.1016/s0006-3495(03)74851-6] [Citation(s) in RCA: 24] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/21/2022] Open
Abstract
The morphology of synthetic glycolipids with lactose oligomers (Lac N, the number of lactose units, N = 1, 2, 3) was studied in lamellar phase. By a systematic combination of differential scanning calorimetry and small- and wide-angle x-ray scattering experiments, the effects of hydrophilic/hydrophobic balance on their thermotropic phase behaviors were discussed. The dispersion of Lac 1 exhibited a crystalline-fluid phase transition, dominated by the strong van der Waals interaction between dihexadecyl chains. In the case of Lac 2, the hydrophilic/hydrophobic balance between the headgroup and the alkyl chains is shifted to the hydrophilic side, resulting in a gel-fluid phase transition with a decreased transition temperature and phase transition enthalpy. Different from the first two systems, the differential scanning calorimetry trace of Lac 3 showed much less remarkable peaks. The small- and wide-angle x-ray diffraction patterns did not reveal any transition in the chain ordering, suggesting that the correlation between the hexasaccharide headgroups is so strong that the melting of the alkyl chains was not allowed. Such dominant effects of the hydrophilic/hydrophobic balance on the morphology of Lac N lipids can be attributed to the small sterical mismatch between the alkyl chains and the linear, cylindrical oligolactose groups.
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Affiliation(s)
- Matthias F Schneider
- Lehrstuhl für Biophysik E22, Technische Universität München, D-85748 Garching, Germany
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Tanaka T, Tamba Y, Masum SM, Yamashita Y, Yamazaki M. La(3+) and Gd(3+) induce shape change of giant unilamellar vesicles of phosphatidylcholine. BIOCHIMICA ET BIOPHYSICA ACTA 2002; 1564:173-82. [PMID: 12101010 DOI: 10.1016/s0005-2736(02)00444-3] [Citation(s) in RCA: 88] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/27/2022]
Abstract
Lanthanides such as La(3+) and Gd(3+) are well known to have large effects on the function of membrane proteins such as mechanosensitive ionic channels and voltage-gated sodium channels, and also on the structure of phospholipid membranes. In this report, we have investigated effects of La(3+) and Gd(3+) on the shape of giant unilamellar vesicle (GUV) of dioleoylphosphatidylcholine (DOPC-GUV) and GUV of DOPC/cholesterol by the phase-contrast microscopy. The addition of 10-100 microM La(3+) (or Gd(3+)) through a 10-microm diameter micropipette near the DOPC-GUV (or DOPC/cholesterol-GUV) triggered several kinds of shape changes. We have found that a very low concentration (10 microM) of La(3+) (or Gd(3+)) induced a shape change of GUV such as the discocyte via stomatocyte to inside budded shape transformation, the two-spheres connected by a neck to prolate transformation, and the pearl on a string to cylinder (or tube) transformation. To understand the effect of these lanthanides on the shape of the GUV, we have also investigated phase transitions of 30 microM dipalmitoylphosphatidylcholine-multilamellar vesicle (DPPC-MLV) by the ultra-sensitive differential scanning calorimetry (DSC). The chain-melting phase transition temperature and the L(beta') to P(beta') phase transition temperature of DPPC-MLV increased with an increase in La(3+) concentration. This result indicates that the lateral compression pressure of the membrane increases with an increase in La(3+) concentration. Thereby, the interaction of La(3+) (or Gd(3+)) on the external monolayer membrane of the GUV induces a decrease in its area (A(ex)), whereas the area of the internal monolayer membrane (A(in)) keeps constant. Therefore, the shape changes of the GUV induced by these lanthanides can be explained reasonably by the decrease in the area difference between two monolayers (DeltaA=A(ex)-A(in)).
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Affiliation(s)
- Tomoki Tanaka
- Materials Science, Graduate School of Science and Engineering, Shizuoka University, 422-8529 Japan
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46
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48
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Riske KA, Amaral LQ, Lamy-Freund MT. Thermal transitions of DMPG bilayers in aqueous solution: SAXS structural studies. BIOCHIMICA ET BIOPHYSICA ACTA 2001; 1511:297-308. [PMID: 11286973 DOI: 10.1016/s0005-2736(01)00287-5] [Citation(s) in RCA: 61] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
Dimyristoylphosphatidylglycerol (DMPG) has been extensively studied as a model for biological membranes, since phosphatidylglycerol is the most abundant anionic phospholipid in prokaryotic cells. At low ionic strengths, this lipid presents a peculiar thermal behavior, with two sharp changes in the light scattering profile, at temperatures named here T(on)(m) and T(off)(m). Structural changes involved in the DMPG thermal transitions are here investigated by small angle X-ray scattering (SAXS), and compared to the results yielded by differential scanning calorimetry (DSC) and electron spin resonance (ESR). The SAXS results show a broad peak, indicating that DMPG is organized in single bilayers, for the range of temperature studied (10-45 degrees C). SAXS intensity shows an unusual effect, starting to decrease at T(on)(m), and presenting a sharp increase at T(off)(m). The bilayer electron density profiles, obtained from modeling the SAXS curves, show a gradual decrease in electron density contrast (attributed to separation between charged head groups) and in bilayer thickness between T(on)(m) and T(off)(m). Results yielded by SAXS, DSC and ESR indicate that a chain melting process starts at T(on)(m), but a complete fluid phase exists only for temperatures above T(off)(m), with structural changes occurring at the bilayer level in the intermediate region.
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Affiliation(s)
- K A Riske
- Instituto de Física, Universidade de S. Paulo, CP 66318, CEP 05315-970, SP, São Paulo, Brazil
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49
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50
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Kloboucek A, Behrisch A, Faix J, Sackmann E. Adhesion-induced receptor segregation and adhesion plaque formation: A model membrane study. Biophys J 1999; 77:2311-28. [PMID: 10512849 PMCID: PMC1300510 DOI: 10.1016/s0006-3495(99)77070-0] [Citation(s) in RCA: 116] [Impact Index Per Article: 4.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022] Open
Abstract
A model system to study the control of cell adhesion by receptor-mediated specific forces, universal interactions, and membrane elasticity is established. The plasma membrane is mimicked by reconstitution of homophilic receptor proteins into solid supported membranes and, together with lipopolymers, into giant vesicles with the polymers forming an artificial glycocalix. The homophilic cell adhesion molecule contact site A, a lipid-anchored glycoprotein from cells of the slime mold Dictyostelium discoideum, is used as receptor. The success of the reconstitution, the structure and the dynamics of the model membranes are studied by various techniques including film balance techniques, micro fluorescence, fluorescence recovery after photobleaching, electron microscopy, and phase contrast microscopy. The interaction of the functionalized giant vesicles with the supported bilayer is studied by reflection interference contrast microscopy, and the adhesion strength is evaluated quantitatively by a recently developed technique. At low receptor concentrations adhesion-induced receptor segregation in the membranes leads to decomposition of the contact zone between membranes into domains of strong (receptor-mediated) adhesion and regions of weak adhesion while continuous zones of strong adhesion form at high receptor densities. The adhesion strengths (measured in terms of the spreading pressure S) of the various states of adhesion are obtained locally by analysis of the vesicle contour near the contact line in terms of elastic boundary conditions of adhesion: the balance of tensions and moments. The spreading pressure of the weak adhesion zones is S approximately 10(-9) J/m(2) and is determined by the interplay of gravitation and undulation forces whereas the spreading pressure of the tight adhesion domains is of the order S approximately 10(-6) J/m(2).
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Affiliation(s)
- A Kloboucek
- Physik Department, E22 (Biophysical Laboratory), Technische Universität München, James-Franck-Strasse, D-85747 Garching, Germany
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