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Rafat R, Nakhaei E, Zargari F, Gorgichi F, Nowroozi A. Quantum chemical study of tautomeric equilibriums, intramolecular hydrogen bonds, and π-electron delocalization in the first singlet and triplet excited states of 2-selenoformyl-3-thioxo-propionaldehyde. J Sulphur Chem 2023. [DOI: 10.1080/17415993.2023.2171292] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/07/2023]
Affiliation(s)
- Ramin Rafat
- Department of Chemistry, Faculty of Science, University of Sistan and Baluchestan (USB), Zahedan, Iran
| | - Ebrahim Nakhaei
- Department of Chemistry, Faculty of Science, University of Sistan and Baluchestan (USB), Zahedan, Iran
| | - Farshid Zargari
- Department of Chemistry, Faculty of Science, University of Sistan and Baluchestan (USB), Zahedan, Iran
| | - Faezeh Gorgichi
- Department of Chemistry, Faculty of Science, University of Sistan and Baluchestan (USB), Zahedan, Iran
| | - Alireza Nowroozi
- Department of Chemistry, Faculty of Science, University of Sistan and Baluchestan (USB), Zahedan, Iran
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First-principle study of the current–voltage on the β-diketones with alkyl and methoxy groups at the beta position as molecular switches. Chem Phys Lett 2022. [DOI: 10.1016/j.cplett.2022.140152] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
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Darugar V, Vakili M, Tayyari SF, Kamounah FS. Validation of potential energy distribution by VEDA in vibrational assignment some of β-diketones; comparison of theoretical predictions and experimental vibration shifts upon deutration. J Mol Graph Model 2021; 107:107976. [PMID: 34192656 DOI: 10.1016/j.jmgm.2021.107976] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/07/2020] [Revised: 06/20/2021] [Accepted: 06/22/2021] [Indexed: 11/27/2022]
Abstract
The harmonic vibrational frequencies of the cis-enol forms of some of β-diketones with different substitution in beta position, vis. H, CH3, and Ph ring, as the symmetric and asymmetric molecules, were calculated using density functional theory (DFT) at the B3LYP/6-311++G(d,p) level of theory. The results of DFT calculations were used to obtain the potential energy distribution (PED) by VEDA software. The PED results compared with the Gauss View animation, as our reassignments, and the experimental IR shifts upon deuteration of hydrogen in the OH and CHα. According to our study, the PED contributions, Gauss View animation and observed shifts show similar results for most of the bands which are not coupled with the OH and/or CHα bending, such as asymmetric and symmetric CH3 stretching and in-plane deformations, CH3 rocking vibrations and 8a, 19b, 9a, 15, 18a, and 12 motions of the phenyl ring. The largest discrepancies were observed in the 1700-1000 cm-1 region, likely due to the coupling with the OH and CHα in-plane bending vibrations, such as νaC = C-C = Ο, νsC = C-C = Ο and δOH. Furthermore, the calculated PED contributions by VEDA software do not well define the vibrational contributions to those groups in the molecule that are directly involved in the intramolecular hydrogen bond and the observed failure of the VEDA procedure is possibly due to inappropriateness of the default options.
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Affiliation(s)
- Vahidreza Darugar
- Department of Chemistry, Faculty of Science, Ferdowsi University of Mashhad, Iran
| | - Mohammad Vakili
- Department of Chemistry, Faculty of Science, Ferdowsi University of Mashhad, Iran.
| | | | - Fadhil S Kamounah
- Department of Chemistry, University of Copenhagen, Universitetsparken 5, DK-2100, Copenhagen Ø, Denmark
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Mehrani S, Tayyari S, Heravi M, Morsali A. Theoretical investigation of solvent effect on the keto–enol tautomerization of pentane-2,4-dione and a comparison between experimental data and theoretical calculations. CAN J CHEM 2021. [DOI: 10.1139/cjc-2020-0293] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/05/2023]
Abstract
The equilibrium constants of stable keto and enol forms of pentane-2,4-dione (known as acetylacetone) are estimated, using the second-order Møller−Plesset (MP2), density functional theory (B3LYP and M06-2X), composite methods (G4, G3, G3B3, CBS-QB3, and G3MP2B3), double-hybrid density functional theory (B2PLYP), and long-range corrected (LC) hybrid functional (ωB97X-D). These methods are integrated with the PCM, CPCM, and SMD models to elucidate the effect of solvent on thermodynamic parameters. The reported measured enol contents in the solutions and gas phase are utilized to benchmark the predictions of different quantum mechanical methods for the keto–enol equilibrium in acetylacetone. In this study, we calculated the enol content in 16 acetylacetone solutions and in the gas phase. Among the applied methods, the MP2 level and the B3LYP level underestimate and overestimate, respectively, the enol content of acetylacetone in the gas phase and solutions. The G3B3 and G3MP2B3 levels give reasonable agreement with the measured data. The best results obtained by calculations at the B2PLYP/6-31+G(2d,p) and CBS-QB3 levels, with mean absolute errors (MAE) relative to experiments of 2.30 and 5.45 and root mean square deviation (RMSD) errors of 0.78 and 1.66, respectively. According to our calculations, one enol and two keto forms (Ket1 and Ket2) coexist in polar solutions. The effect of solvent was more pronounced on the structure and stability of the Ket2 tautomer than others. The strength of the intramolecular hydrogen bond in the enol form of acetylacetone is almost independent of the solvent polarity.
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Affiliation(s)
- S. Mehrani
- Department of Chemistry, Mashhad Branch, Islamic Azad University, Mashhad, Iran
- Department of Chemistry, Mashhad Branch, Islamic Azad University, Mashhad, Iran
| | - S.F. Tayyari
- Department of Chemistry, Mashhad Branch, Islamic Azad University, Mashhad, Iran
- Department of Chemistry, Mashhad Branch, Islamic Azad University, Mashhad, Iran
| | - M.M. Heravi
- Department of Chemistry, Mashhad Branch, Islamic Azad University, Mashhad, Iran
- Department of Chemistry, Mashhad Branch, Islamic Azad University, Mashhad, Iran
| | - A. Morsali
- Department of Chemistry, Mashhad Branch, Islamic Azad University, Mashhad, Iran
- Department of Chemistry, Mashhad Branch, Islamic Azad University, Mashhad, Iran
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Rafat R, Nowroozi A. Solvent effects on the molecular stability, intramolecular hydrogen bond, and π-electron delocalization in the simple RAHB systems with different donors and acceptors: a quantum chemical study. Struct Chem 2018. [DOI: 10.1007/s11224-018-1221-2] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
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Naeini FG, Nowroozi A. Evaluation the origin of conformational preferences in trifluoroacetylacetaldehyde by detail analysis of the intramolecular hydrogen bond and π-electron delocalization in the ground and first excited states. J STRUCT CHEM+ 2017. [DOI: 10.1134/s0022476617060257] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
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Isoxazole derivatives of alpha-pinene isomers: Synthesis, crystal structure, spectroscopic characterization (FT-IR/NMR/GC–MS) and DFT studies. J Mol Struct 2016. [DOI: 10.1016/j.molstruc.2015.11.079] [Citation(s) in RCA: 19] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
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Tayyari SF, Laleh S, Zahedi-Tabrizi M, Vakili M. Structure, vibrational assignment, and NMR spectroscopy of 1,2-bis (dichloroacetyl) cyclopentadiene. J Mol Struct 2013. [DOI: 10.1016/j.molstruc.2012.09.069] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/27/2022]
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A quantum chemical study of conformational and tautomeric preferences, intramolecular hydrogen bonding and π-electron delocalization on dinitrosomethane; in gas phase and water solution. Struct Chem 2012. [DOI: 10.1007/s11224-012-9997-y] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
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Nowroozi A, Roohi H, Hajiabadi H, Raissi H, Khalilinia E, Najafi Birgan M. OH⋯S intramolecular hydrogen bond in thiomalonaldehyde derivatives; a quantum chemical study. COMPUT THEOR CHEM 2011. [DOI: 10.1016/j.comptc.2010.11.029] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
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Belova NV, Sliznev VV, Oberhammer H, Girichev GV. Tautomeric and conformational properties of β-diketones. J Mol Struct 2010. [DOI: 10.1016/j.molstruc.2010.02.070] [Citation(s) in RCA: 40] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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Liu G, Ping L, Li H. C-H...O hydrogen bond in chloroform-triformylmethane complex: blue-shifted or red-shifted? SPECTROCHIMICA ACTA. PART A, MOLECULAR AND BIOMOLECULAR SPECTROSCOPY 2007; 66:643-5. [PMID: 16807082 DOI: 10.1016/j.saa.2006.04.004] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/05/2005] [Revised: 04/19/2006] [Accepted: 04/21/2006] [Indexed: 05/10/2023]
Abstract
B3LYP/6-311+G** level of theory is used to investigate the C-H...O hydrogen bond formed by chloroform and two conformers of triformylmethane (TFM), i.e. cis-TFM (concerned with C1 configuration) and trans-TFM (concerned with C2 and C3 configurations). Polarized continuum model (PCM) is used to study the solvent (chloroform) effect on this hydrogen bond. The C3 configuration is more stable than the C1 configuration whether the absolute energy or the stabilization energy is concerned. For the C1 and C2 configurations this hydrogen bond is of blue-shifted type both in gas phase and in chloroform solution. For the C3 configuration this hydrogen bond is of red-shifted type in gas phase but turns into blue-shifted type in chloroform solution instead. It's inappropriate to simply designate this hydrogen bond as blue-shifted type or red-shifted type.
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Affiliation(s)
- Guoqun Liu
- School of Materials and Chemical Engineering, Zhongyuan University of Technology, Zhengzhou 450007, China.
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Molecular structure and vibrational assignment of (trifluoroacetyl) acetone: A density functional study. J Mol Struct 2006. [DOI: 10.1016/j.molstruc.2005.10.042] [Citation(s) in RCA: 26] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
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Nowroozi A, Raissi H. Strong intramolecular hydrogen bond in triformylmethane ab-initio, AIM and NBO study. ACTA ACUST UNITED AC 2006. [DOI: 10.1016/j.theochem.2005.10.037] [Citation(s) in RCA: 37] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
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Tayyari S, Moosavi-Tekyeh Z, Zahedi-Tabrizi M, Eshghi H, Emampour J, Rahemi H, Hassanpour M. Intramolecular hydrogen bonding in 2-nitromalonaldehyde: Infrared spectrum and quantum chemical calculations. J Mol Struct 2006. [DOI: 10.1016/j.molstruc.2005.08.012] [Citation(s) in RCA: 22] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/25/2022]
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The presentation of an approach for estimating the intramolecular hydrogen bond strength in conformational study of β-Aminoacrolein. ACTA ACUST UNITED AC 2005. [DOI: 10.1016/j.theochem.2005.04.018] [Citation(s) in RCA: 75] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
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Tabrizi MZ, Tayyari SF, Tayyari F, Behforouz M. Fourier transform infrared and Raman spectra, vibrational assignment and density functional theory calculations of naphthazarin. SPECTROCHIMICA ACTA. PART A, MOLECULAR AND BIOMOLECULAR SPECTROSCOPY 2004; 60:111-120. [PMID: 14670467 DOI: 10.1016/s1386-1425(03)00186-0] [Citation(s) in RCA: 15] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/24/2023]
Abstract
FT Raman and FTIR spectra of Naphthazarin (5,8-dihydroxy-1,4-naphthoquinone) and its deuterated analogue are recorded. Comparison between the spectra obtained by two techniques, a series of density functional theory (DFT) calculations and the spectral behavior upon deuteration were used for the assignment of the vibrational spectra of this compound. The calculated vibrational frequencies by the B3LYP, B3PW91, G96LYP, G96P86, and MPWLYP density functionals are generally consistent with the observed spectra. Infrared and Raman vibrational transitions predicted by B3LYP/6-311++G** are reported for the titled compound and its deuterated analogous and the assignments are discussed. All experimental and theoretical results support a relatively weak hydrogen bond in naphthazarin (NZ), compared with that in the enol form of normal beta-diketones. The observed nuOH/nuOD and gammaOH/gammaOD appear at about 3060/2220 and 790/560 cm(-1), respectively, which are consistent with the calculated hydrogen bond geometry and proton chemical shift results. Two bands at about 350 and 290 cm(-1) are assigned to the O...O stretching modes belong to A1 and B2 species, respectively.
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