Response calculations of electronic and vibrational transitions in molecular oxygen induced by interaction with noble gases

Singlet Oxygen Photophysics: From Liquid Solvents to Mammalian Cells

Molecular oxygen, O2, has long provided a cornerstone for studies in chemistry, physics, and biology. Although the triplet ground state, O2(X3Σg-), has garnered much attention, the lowest excited electronic state, O2(a1Δg), commonly called singlet oxygen, has attracted appreciable interest, principally because of its unique chemical reactivity in systems ranging from the Earth's atmosphere to biological cells. Because O2(a1Δg) can be produced and deactivated in processes that involve light, the photophysics of O2(a1Δg) are equally important. Moreover, pathways for O2(a1Δg) deactivation that regenerate O2(X3Σg-), which address fundamental principles unto themselves, kinetically compete with the chemical reactions of O2(a1Δg) and, thus, have practical significance. Due to technological advances (e.g., lasers, optical detectors, microscopes), data acquired in the past ∼20 years have increased our understanding of O2(a1Δg) photophysics appreciably and facilitated both spatial and temporal control over the behavior of O2(a1Δg). One goal of this Review is to summarize recent developments that have broad ramifications, focusing on systems in which oxygen forms a contact complex with an organic molecule M (e.g., a liquid solvent). An important concept is the role played by the M+•O2-• charge-transfer state in both the formation and deactivation of O2(a1Δg).

Ab initio calculations of the spectra and lifetimes of the lead dimer

Owing to the key role of the lead dimer (Pb2) as a heavy element benchmark for the Group IV-A dimers the assignment of its spectroscopic properties and chemical bonding is an important undertaking. To meet this demand, the present work provides comprehensive and detailed information on electronic structure and properties comprising a wide set of Pb2 states. Calculations are performed by a high-level ab initio approach. Firstly, the potential energy curves (PECs) of 19 Λ-S states as well as those of 24 ungerade Ω states are calculated by utilizing the multi-reference configuration interaction plus Davidson correction (MRCI + Q) method taking into account core-valence correlation (CV) and spin-orbit coupling (SOC) effect, where Ω is a quantum number of the total (Λ + S) angular momentum projection. Secondly, interactions between the bound F3Σ-u, 23Σ+u states and repulsive 15Πu state induced by strong SOC are discussed based on the PECs analysis and calculated SOC matrix, which also indicates that the F3Σ-u state is predissociative. Thirdly, based on the calculated electric dipole transition moments and energy gaps between the 0+u(III), F0+u(II), C0+u(I) and X0+g states, the intense absorption bands of Pb2 due to these transitions are interpreted. Our results indicate that the trends in intensity of absorption spectra (F0+u(II), C0+u(I) ← X0+g) in the range of 12 600-13 600 and 22 200-23 800 cm-1 are consistent with the previously observed spectra of Pb2 in the qualitatively similar regions (15 200-16 200 and 19 800-21 800 cm-1). Finally, the calculated intensity of the weak magnetic-dipole transitions from the singlet excited b1Σ+g and a1Δg states to the triplet ground X3Σ-g state and their electric quadrupole components are presented for the Pb2 molecule in terms of SOC perturbations for the calculated Ω states expressed in Λ-S state notation. Based on our theoretical assignment, we predict that the weak emission a1Δg2 → X3Σ-g1 bands could be observed experimentally. The present work provides comprehensive electronic structure information and sheds new light on the absorption and emission spectra of the Pb2 dimer.

Channel Selection of Ultracold Atom-Molecule Scattering in Dynamic Magnetic Fields

We demonstrate that final states of ultracold molecules by scattering with atoms can be selectively produced using dynamic magnetic fields of multiple frequencies. We develop a multifrequency Floquet coupled channel method to study the channel selection by dynamic magnetic field control, which can be interpreted by a generalized quantum Zeno effect for the selected scattering channels. In particular, we use an atom-molecule spin-flip scattering to show that the transition to certain final states of the molecules in the inelastic scattering can be suppressed by engineered coupling between the Floquet states.

Geometry Dependence of Spin-Orbit Coupling in Complexes of Molecular Oxygen with Atoms, H2, or Organic Molecules

Studies of the interactions between molecular oxygen and a perturbing species, such as an organic solvent, have been an active research area for at least 70 years. In particular, interaction with a neighboring molecule or atom may perturb the electronic states of oxygen to such an extent that the O₂(a¹Δ_g) → O₂(X³Σ_g^-) transition, formally forbidden as an electric dipole process, achieves significant transition probability. We present a computational study of how the geometry of complexes consisting of molecular oxygen and different perturbing species influences the magnitude of spin-orbit coupling that facilitates the O₂(a¹Δ_g) → O₂(X³Σ_g^-) transition. We rationalize our results using a model based on orbital interactions: a non-zero spin-orbit coupling matrix element results from asymmetric transfer of charge to or from the 1π_g orbitals on oxygen. Our results indicate that the atoms in a perturbing species closest to oxygen are responsible for the majority of the spin-orbit interactions, suggesting that large systems can be simplified appreciably. Furthermore, we infer and confirm that an estimate of the spin-orbit coupling matrix element can be obtained from the magnitude of the induced energy splitting of oxygen's 1π_g orbitals. These results should provide further momentum in the long-standing issue of understanding phenomena that influence the O₂(a¹Δ_g) → O₂(X³Σ_g^-) transition.

Ozone destruction due to the recombination of oxygen atoms

Kinetics of ozone destruction due to the recombination of oxygen atoms produced by pulsed 266 nm laser photolysis of O₃/M (M = CO₂ and/or N₂) mixtures was studied using the absorption and emission spectroscopy to follow time evolutions of O₃ and electronically excited molecules O₂* formed in the recombination process 2O(³P) + M → O₂* + M. An unexpected high ozone destruction rate was observed when O₂* was present in the system. The kinetic model developed for the oxygen nightglow on the terrestrial planets was adapted to interpret the detected temporal profiles of the ozone number density and the O₂* emission intensities. It was deduced that the vibrationally excited singlet delta oxygen molecule O₂(a¹Δ, υ) formed in the secondary processes reacts efficiently with ozone in the process O₂(a¹Δ, υ ≥ 3) + O₃ → 2O₂ + O, and the rate constant of this process was estimated to be 3 × 10^-11 cm³ s^-1. Ab initio calculations at the CASPT2(14, 12)/cc-pVTZ/UωB97XD/cc-pVTZ level of theory were applied to find the reaction pathway from the reactants to products on the O₅ potential energy surface. These calculations revealed that the O₂(a¹Δ) + O₃ reaction is likely to proceed via singlet-triplet intersystem crossing exhibiting an energy barrier of 9.6 kcal/mol, which lies between two and three quanta of vibrational excitation of O₂(a¹Δ), and hence, O₂(a¹Δ, υ) with υ ≥ 3 could rapidly react with ozone.

Reaction of the N Atom with Electronically Excited O2 Revisited: A Theoretical Study

The kinetics of the reaction of N with electronically excited O₂ (singlet a¹Δ_g and b¹Σ_g⁺ states), potentially relevant for NO_x formation in nonthermal air plasma, is theoretically studied using the multireference second-order perturbation theory. The corresponding thermodynamically and kinetically favored reaction pathways together with possible intersystem crossings are identified. It has been revealed that the energy barrier for the N + O₂(a¹Δ_g) → NO + O reaction is approximately twice the barrier height for the counterpart process with O₂(X³Σ_g^-). The molecular oxygen in the b¹Σ_g⁺ state, in turn, proved to be even less reactive to atomic nitrogen than O₂(a¹Δ_g). Appropriate thermal rate constants for specified reaction channels are calculated by the variational transition-state theory incorporating corrections for the tunneling effect, nonadiabatic transitions, and anharmonicity of vibrations for transition states and reactants. The corresponding three-parameter Arrhenius expressions for the broad temperature range (T = 300-4000 K) are reported. At last, post-transition-state molecular dynamics simulations indicate that the N + O₂(a¹Δ_g) reaction produces vibrationally much colder NO molecules than the N + O₂(X³Σ_g^-) process.

New Aspects of the Airglow Problem and Reactivity of the Dioxygen Quintet O2(5Πg) State in the MLT Region as Predicted by DFT Calculations

Dioxygen in the quintet O₂(⁵Π_g) state is a weakly bound species near the entrance of the O(³P) + O(³P) recombination channel. It was predicted by ab initio calculations in 1977 and detected experimentally in 1999. Meantime, the O₂(⁵Π_g) species was tentatively assumed as intermediate in transport properties calculations for the rarefied gases of the Earth's upper atmosphere, though its potential energy curve is still debated. Besides six other strongly bound low-lying states of dioxygen, the O₂(⁵Π_g) state is an important potential candidate for modeling energy transfer and airglow of the upper atmosphere. A number of photochemical kinetic schemes designed to simulate energy flow upon atomic and molecular oxygen collisions in the rarefied mesosphere take into account a participation of the O₂(⁵Π_g) state in energy relaxation processes responsible for terrestrial nightglow. All mechanisms of energy redistribution are based on the hard-sphere collision models. The possibility of chemical interactions between the quintet excited state of dioxygen and other atmospheric components has not been considered so far in photochemistry of the upper atmosphere. In the present paper, the chemical reactivity of the quintet O₂(⁵Π_g) species is calculated for the first time in the framework of the density functional theory. Definitely, O₂(⁵Π_g) is the most reactive species among all other metastable dioxygen states below 5.1 eV. Quintet products of the O₂(⁵Π_g) state association with heavy inert gases, H₂O, N₂, and CO₂ are predicted to be chemically significant, while the complexes with abundant H₂ and He species are rather weak and not important even in the mesopause low-temperature region. The complex with N₂ molecule is unexpectedly stable with dissociation energy 4 kJ/mol, which can strongly influence the abundant termolecular association O + O + N₂ → O₂ + N₂ process. Reaction with meteoritic ablated Mg atom produces metastable ⁵A₁ excited state of MgO₂ being more strongly bound than the ground ³A₂ state of magnesium peroxide.

Singlet Oxygen Generation via UV-A, -B, and -C Photoexcitation of Isoprene-Oxygen (C5H8-O2) Encounter Complexes in the Gas Phase

The formation of singlet oxygen ¹O₂ provided by the photoexcitation of the encounter complexes of isoprene with oxygen (C₅H₈-O₂) in the gas phase within the spectral region 253.5-355 nm has been observed at the elevated pressure of oxygen. Singlet oxygen has been detected with its NIR luminescence centered near 1.27 μm. The photogeneration of ¹O₂ is found to be a one-photon process. In the UV-C region (253-278 nm) the quantum yield of ¹O₂ is measured. This yield of ¹O₂ is governed mainly by photoexcitation of O₂ molecules to the Herzberg III (³Δ_u) state via enhanced absorption by C₅H₈-O₂ collision complexes. So excited triplet O₂ gives rise to singlet oxygen because of triplet-triplet annihilation in the collisions with unexcited O₂ molecules. In the UV-B (308 nm) region the appearance of ¹O₂ is attributed to the excitation of a double spin-flip (DSF) transition in complex C₅H₈-O₂. In the UV-A region (355 nm) besides DSF the O₂-assisted T₁ ← S₀ excitation of isoprene to the triplet state takes place, which is a sensitizer of ¹O₂ formation. The contribution of the encounter complexes C₅H₈-O₂ to the production of singlet oxygen and to the lifetime of isoprene in the Earth's troposphere are estimated.

CNS function and dysfunction during exposure to hyperbaric oxygen in operational and clinical settings

Hyperbaric oxygen (HBO2) is breathed during hyperbaric oxygen therapy and during certain undersea pursuits in diving and submarine operations. What limits exposure to HBO2 in these situations is the acute onset of central nervous system oxygen toxicity (CNS-OT) following a latent period of safe oxygen breathing. CNS-OT presents as various non-convulsive signs and symptoms, many of which appear to be of brainstem origin involving cranial nerve nuclei and autonomic and cardiorespiratory centers, which ultimately spread to higher cortical centers and terminate as generalized tonic-clonic seizures. The initial safe latent period makes the use of HBO2 practical in hyperbaric and undersea medicine; however, the latent period is highly variable between individuals and within the same individual on different days, making it difficult to predict onset of toxic indications. Consequently, currently accepted guidelines for safe HBO2 exposure are highly conservative. This review examines the disorder of CNS-OT and summarizes current ideas on its underlying pathophysiology, including specific areas of the CNS and fundamental neural and redox signaling mechanisms that are thought to be involved in seizure genesis and propagation. In addition, conditions that accelerate the onset of seizures are discussed, as are current mitigation strategies under investigation for neuroprotection against redox stress while breathing HBO2 that extend the latent period, thus enabling safer and longer exposures for diving and medical therapies.

Photochemistry and Spectroscopy of Singlet Oxygen in Solvents. Recent Advances which Support the Old Theory

Molecular oxygen is a paramagnetic gas with the triplet O2( ) ground state which exhibits just sluggish chemical reactivity in the absence of radical sources. In contrast, the excited metastable singlet oxygen O2( ) is highly reactive; it can oxygenate organic molecules in a wide range of specific reactions which differ from those of the usual triplet oxygen of the air. This makes the singlet oxygen an attractive reagent for new synthesis and even for medical treatments in photodynamic therapy. As an important intermediate O2( ) has attracted great attention of chemists during half-century studies of its reactivity and spectroscopy, but unusual properties of singlet oxygen makes it difficult to unravel all mysterious features. The semiempirical theory of spin-orbit coupling in dioxygen and in collision complexes of O2 with diamagnetic molecules proposed in 1982 year has explained and predicted many photochemical and spectral properties of dioxygen produced by the dye sensitization in solvents. Recent experiments with direct laser excitation of O2 in solvents provide a complete support of the old theory. The present review scrutinizes the whole story of development and experimental verification of this theory.

Microparticle formation by platelets exposed to high gas pressures - An oxidative stress response

This investigation explored the mechanism for microparticles (MPs) production by human and murine platelets exposed to high pressures of inert gases. Results demonstrate that MPs production occurs via an oxidative stress response in a dose-dependent manner and follows the potency series N₂>Ar>He. Gases with higher van der Waals volumes or polarizability such as SF₆ and N₂O, or hydrostatic pressure, do not cause MPs production. Singlet O₂ is generated by N₂, Ar and He, which is linked to NADPH oxidase (NOX) activity. Progression of oxidative stress involves activation of nitric oxide synthase (NOS) leading to S-nitrosylation of cytosolic actin. Exposure to gases enhances actin filament turnover and associations between short actin filaments, NOS, vasodilator-stimulated phosphoprotein (VASP), focal adhesion kinase (FAK) and Rac1. Inhibition of NOS or NOX by chemical inhibitors or using platelets from mice lacking NOS2 or the gp91phox component of NOX diminish generation of reactive species, enhanced actin polymerization and MP generation by high pressure gases. We conclude that by initiating a sequence of progressive oxidative stress responses high pressure gases cause platelets to generate MPs.

Ab initio investigation of electric and magnetic dipole electronic transitions in the complex of oxygen with benzene

The electric dipole transitions between pure spin and mixed spin electronic states are calculated at the XMC-QDPT2 and MCSCF levels of theory, respectively, for different intermolecular distances of the C6H6 and O2 collisional complex. The magnetic dipole transition moment between the mixed-spin ground ("triplet") and the first excited ("singlet") states is calculated by quadratic response at MCSCF level of theory. The obtained results confirm the theory of intensity borrowing and increasing the intensity of electronic transitions in the C6H6 + O2 collision. The calculation of magnetically induced current density is performed for benzene molecule being in contact with O2 at the distances from 3.5 to 4.5 Å. The calculation shows that the aromaticity of benzene is rising due to the conjugation of π-MOs of both molecules. The C6H6 + O2 complex becomes nonaromatic at the short distances (r < 3.5 Å). The computation of static polarizability in the excited electronic states of the C6H6 + O2 collisional complex at various distances supports the theory of red solvatochromic shift of the a → X band. Graphical abstract The C6H6+ O2 collisional complex.

Neutrophils generate microparticles during exposure to inert gases due to cytoskeletal oxidative stress

This investigation was to elucidate the mechanism for microparticle (MP) formation triggered by exposures to high pressure inert gases. Human neutrophils generate MPs at a threshold of ∼186 kilopascals with exposures of 30 min or more. Murine cells are similar, but MP production occurs at a slower rate and continues for ∼4 h, whether or not cells remain under pressure. Neutrophils exposed to elevated gas but not hydrostatic pressure produce MPs according to the potency series: argon ≃ nitrogen > helium. Following a similar pattern, gases activate type-2 nitric-oxide synthase (NOS-2) and NADPH oxidase (NOX). MP production does not occur with neutrophils exposed to a NOX inhibitor (Nox2ds) or a NOS-2 inhibitor (1400W) or with cells from mice lacking NOS-2. Reactive species cause S-nitrosylation of cytosolic actin that enhances actin polymerization. Protein cross-linking and immunoprecipitation studies indicate that increased polymerization occurs because of associations involving vasodilator-stimulated phosphoprotein, focal adhesion kinase, the H(+)/K(+) ATPase β (flippase), the hematopoietic cell multidrug resistance protein ABC transporter (floppase), and protein-disulfide isomerase in proximity to short actin filaments. Using chemical inhibitors or reducing cell concentrations of any of these proteins with small inhibitory RNA abrogates NOS-2 activation, reactive species generation, actin polymerization, and MP production. These effects were also inhibited in cells exposed to UV light, which photoreverses S-nitrosylated cysteine residues and by co-incubations with the antioxidant ebselen or cytochalasin D. The autocatalytic cycle of protein activation is initiated by inert gas-mediated singlet O2 production.

Overview of Theoretical and Computational Methods Applied to the Oxygen–Organic Molecule Photosystem

The challenges of using modern theoretical and computational tools to model the unique features of the oxygen-organic molecule photosystem are discussed from a historical and pedagogical perspective. This review is written for the novice, but the problems formulated should stimulate the expert.