Microbial demetallization of crude oil: Nickel protoporphyrin disodium as a model organo-metallic substrate

Sedimentary Cobalt Protoporphyrin as a Potential Precursor of Prosthetic Heme Group for Bacteria Inhabiting Fossil Organic Matter-Rich Shale Rock

This study hypothesizes that bacteria inhabiting shale rock affect the content of the sedimentary cobalt protoporphyrin present in it and can use it as a precursor for heme synthesis. To verify this hypothesis, we conducted qualitative and quantitative comparative analyses of cobalt protoporphyrin as well as heme, and heme iron in shale rock that were (i) inhabited by bacteria in the field, (ii) treated with bacteria in the laboratory, and with (iii) bacterial culture on synthetic cobalt protoporphyrin. Additionally, we examined the above-mentioned samples for the presence of enzymes involved in the heme biosynthesis and uptake as well as hemoproteins. We found depletion of cobalt protoporphyrin and a much higher heme concentration in the shale rock inhabited by bacteria in the field as well as the shale rock treated with bacteria in the laboratory. Similarly, we observed the accumulation of protoporphyrin in bacterial cells grown on synthetic cobalt protoporphyrin. We detected numerous hemoproteins in metaproteome of bacteria inhabited shale rock in the field and in proteomes of bacteria inhabited shale rock and synthetic cobalt protoporhyrin in the laboratory, but none of them had all the enzymes involved in the heme biosynthesis. However, proteins responsible for heme uptake, ferrochelatase and sirohydrochlorin cobaltochelatase/sirohydrochlorin cobalt-lyase were detected in all studied samples.

Nondestructive Analysis of Mummification Balms in Ancient Egypt Based on EPR of Vanadyl and Organic Radical Markers of Bitumen

The black matter employed in the funeral context by ancient Egyptians is a complex mixture of plant-based compounds with variable amounts of bitumen. Asphaltene, the most resistant component of bitumen, contains vanadyl porphyrins and carbonaceous radicals, which can be used as paramagnetic probes to investigate embalming materials without sample preparation. Electron paramagnetic resonance (EPR) at the X-band, combining in-phase and out-of-phase detection schemes, provides new information in a nondestructive way about the presence, the origin, and the evolution of bitumen in these complex materials. It is found that the relative EPR intensity of radicals and vanadyl porphyrins is sensitive to the origin of the bitumen. The presence of nonporphyrinic vanadyl complexes in historical samples is likely due to the complexation of VO²⁺ ions by carboxylic functions at the interface between bitumen and other biological components of the embalming matter. The absence of such oxygenated vanadyl complex in natural bitumen and in one case of historical human mummy acquired by a museum in the 19th century reveals a possible, nondocumented, ancient restoration of this mummy by pure bitumen. The linear correlation between in-phase and out-of-phase EPR intensities of radicals and vanadyl porphyrins in balms and in natural bitumen reveals a nanostructuration of radicals and vanadyl porphyrin complexes, which was not affected by the preparation of the balm. This points to the remarkable chemical stability of paramagnetic probes in historical bitumen in ancient Egypt.

Upgrading of Oils from Biomass and Waste: Catalytic Hydrodeoxygenation

The continuous demand for fossil fuels has directed significant attention to developing new fuel sources to replace nonrenewable fossil fuels. Biomass and waste are suitable resources to produce proper alternative fuels instead of nonrenewable fuels. Upgrading bio-oil produced from biomass and waste pyrolysis is essential to be used as an alternative to nonrenewable fuel. The high oxygen content in the biomass and waste pyrolysis oil creates several undesirable properties in the oil, such as low energy density, instability that leads to polymerization, high viscosity, and corrosion on contact surfaces during storage and transportation. Therefore, various upgrading techniques have been developed for bio-oil upgrading, and several are introduced herein, with a focus on the hydrodeoxygenation (HDO) technique. Different oxygenated compounds were collected in this review, and the main issue caused by the high oxygen contents is discussed. Different groups of catalysts that have been applied in the literature for the HDO are presented. The HDO of various lignin-derived oxygenates and carbohydrate-derived oxygenates from the literature is summarized, and their mechanisms are presented. The catalyst’s deactivation and coke formation are discussed, and the techno-economic analysis of HDO is summarized. A promising technique for the HDO process using the microwave heating technique is proposed. A comparison between microwave heating versus conventional heating shows the benefits of applying the microwave heating technique. Finally, how the microwave can work to enhance the HDO process is presented.