Wild felid diversity and activity patterns in Sabangau peat-swamp forest, Indonesian Borneo

The rise of hyperabundant native generalists threatens both humans and nature

In many disturbed terrestrial landscapes, a subset of native generalist vertebrates thrives. The population trends of these disturbance-tolerant species may be driven by multiple factors, including habitat preferences, foraging opportunities (including crop raiding or human refuse), lower mortality when their predators are persecuted (the 'human shield' effect) and reduced competition due to declines of disturbance-sensitive species. A pronounced elevation in the abundance of disturbance-tolerant wildlife can drive numerous cascading impacts on food webs, biodiversity, vegetation structure and people in coupled human-natural systems. There is also concern for increased risk of zoonotic disease transfer to humans and domestic animals from wildlife species with high pathogen loads as their abundance and proximity to humans increases. Here we use field data from 58 landscapes to document a supra-regional phenomenon of the hyperabundance and community dominance of Southeast Asian wild pigs and macaques. These two groups were chosen as prime candidates capable of reaching hyperabundance as they are edge adapted, with gregarious social structure, omnivorous diets, rapid reproduction and high tolerance to human proximity. Compared to intact interior forests, population densities in degraded forests were 148% and 87% higher for wild boar and macaques, respectively. In landscapes with >60% oil palm coverage, wild boar and pig-tailed macaque estimated abundances were 337% and 447% higher than landscapes with <1% oil palm coverage, respectively, suggesting marked demographic benefits accrued by crop raiding on calorie-rich food subsidies. There was extreme community dominance in forest landscapes with >20% oil palm cover where two pig and two macaque species accounted for >80% of independent camera trap detections, leaving <20% for the other 85 mammal species >1 kg considered. Establishing the population trends of pigs and macaques is imperative since they are linked to cascading impacts on the fauna and flora of local forest ecosystems, disease and human health, and economics (i.e., crop losses). The severity of potential negative cascading effects may motivate control efforts to achieve ecosystem integrity, human health and conservation objectives. Our review concludes that the rise of native generalists can be mediated by specific types of degradation, which influences the ecology and conservation of natural areas, creating both positive and detrimental impacts on intact ecosystems and human society.

Sunda Clouded Leopard Neofelis diardi (Cuvier, 1823) (Mammalia: Carnivora: Felidae) occupancy in Borneo: results of a pilot vehicle spotlight transect survey

The Sunda Clouded Leopard Neofelis diardi on Borneo is threatened principally by deforestation for oil palm plantations and the indiscriminate use of illegal trapping. Sunda Clouded Leopard populations are decreasing across their range, and the species has been categorised as Vulnerable on the IUCN Red List. Despite the persistence of threats and numerous surveys in recent years, information on its ecology is still limited. Most studies to date have relied on the use of camera traps as their primary sampling tool, as it is challenging otherwise to gather data on Sunda Clouded Leopards. This study aimed to test the feasibility of estimating the Sunda Clouded Leopard occupancy using a different approach. We conducted vehicle spotlight transect surveys in a mixed-use forest reserve and logging concession in Sabah. We drove a cumulative total of 8,433 km of transects at night and documented the occurrence of Sunda Clouded Leopards in eight out of 31 predetermined long-distance transects, yielding a relatively low naïve occupancy rate (nO = 0.26). When accounting for imperfect detection (ρ = 0.15), null occupancy of Sunda Clouded Leopards appeared much higher (ᴪ = 0.55), though our parameter estimates lacked relative precision. Despite this, our results suggest there may be potential to further refine and adapt a basic, cost-effective monitoring approach in a local mixed-use reserve with the help of concession managers and additional improvements to study design. We caution, however, that not all study sites may be suited for this type of approach and strongly advise the development of pilot studies to evaluate their overall feasibility.

Wild Felid Diversity, Space Use and Activity Patterns in the Eastern Himalaya, India

Species with similar resource requirements cannot coexist for long. To facilitate co-existence, carnivores adapt different strategies to partition the available resources in space and time. In high-altitude ecosystems with limited resources the operation becomes complex. We assessed species diversity and spatio-temporal resource partitioning among felid species inhabiting the intricate habitats of Khangchendzonga Biosphere Reserve (KBR), Eastern Himalaya. We used systematic camera trap surveys along with abundance and overlap indices to generate information on their space use and activity patterns. We recorded six species of felids belonging to five genera, including four species of global conservation importance. The differential use of space by felids was observed with respect to the habitat types determined by sharp altitudinal gradients with varied levels of spatial and altitudinal overlap. Maximum overlap was observed among Asiatic golden cat Catopuma temminckii, jungle cat Felis chaus and clouded leopard Neofelis nebulosa. The felids had distinct activity profiles from one other, particularly between golden cat and leopard cat Prionailurus bengalensis. Pianka’s index also provided weak evidence for temporal overlap among species. The overall results indicate that habitat heterogeneity facilitates primary separation at the spatial scale, although species are also segregated temporally. Golden cat was the most adaptive felid in the area, depicting a peculiar pattern of spatio-temporal segregation with other species. We suspect either intense competition or dietary segregation among some species, and propose a further investigation of their diet and the activity patterns of their prey. The study presents an early template of carnivore community organization in resource-scarce high-altitude environments, thus, offering huge ecological and conservation significance.

Understanding the distribution and fine-scale habitat selection of mesocarnivores along a habitat quality gradient in western Himalaya

Background: Human activities have resulted in a rapid increase of modified habitats in proximity to wildlife habitats in the Himalaya. However, it is crucial to understand the extent to which human habitat modification affects wildlife. Mesocarnivores generally possess broader niches than large carnivores and adapt quickly to human activities. Here, we use a case study in the western Himalaya to test the hypothesis that human disturbance influenced mesocarnivore habitat use. Methods: We used camera trapping and mitochondrial DNA-based species identification from faecal samples to obtain mesocarnivore detections. We then compared the responses of mesocarnivores between an anthropogenic site and a less disturbed park along a contiguous gradient in habitat quality. The non-linear pattern in species-specific habitat selection and factors responsible for space usage around villages was captured using hierarchical generalized additive modelling (HGAM) and non-metric multidimensional scaling (NMDS) ordination. Results: Wildlife occurrences along the gradient varied by species. Leopard cat and red fox were the only terrestrial mesocarnivores that occurred in both anthropogenic site and park. We found a shift in habitat selection from less disturbed habitat in the park to disturbed habitat in anthropogenic site for the species detected in both the habitat types. For instance, red fox showed habitat selection towards high terrain ruggedness (0.5 to 0.7 TRI) and low NDVI (-0.05 to 0.2) in the park but no such specific selection in anthropogenic site. Further, leopard cat showed habitat selection towards moderate slope (20°) and medium NDVI (0.5) in park but no prominent habitat selections in anthropogenic site. The results revealed their constrained behaviour which was further supported by the intensive site usage close to houses, agricultural fields and human trails in villages. Conclusions: Our results indicate shifts in habitat selection and intensive site usage by mesocarnivores in the human-modified habitat. In future, this suggests the possibility of conflict and disease spread affecting both the people and wildlife. Therefore, this study highlights the requisite to test the wildlife responses to rapidly growing human expansions in modified habitats to understand the extent of impact. The management strategies need to have an integrated focus for further expansions of modified habitat and garbage disposal strategies, especially in the human-wildlife interface area.

Investigating Carnivore Guild Structure: Spatial and Temporal Relationships amongst Threatened Felids in Myanmar

The co-occurrence of felid species in Southeast Asia provides an unusual opportunity to investigate guild structure and the factors controlling it. Using camera-trap data, we quantified the space use, temporal activity, and multi-dimensional niche overlap of the tiger, clouded leopard, Asiatic golden cat, marbled cat, and leopard cat in the Htamanthi Wildlife Sanctuary, Myanmar. We hypothesised that the spatio-temporal behaviour of smaller cats would reflect the avoidance of the larger cats, and similar-sized guild members would partition their niches in space or time to reduce resource competition. Our approach involved modelling single-species occupancy, pairwise spatial overlap using Bayesian inference, activity overlap with kernel density estimation, and multivariate analyses. The felid assembly appeared to be partitioned mainly on a spatial rather than temporal dimension, and no significant evidence of mesopredator release was observed. Nonetheless, the temporal association between the three mesopredators was inversely related to the similarity in their body sizes. The largest niche differences in the use of space and time occurred between the three smallest species. This study offers new insight into carnivore guild assembly and adds substantially to knowledge of five of the least known felids of conservation concern.

Probable extirpation of the hog deer from China: implications for conservation

The hog deer Axis porcinus formerly occurred in south-west China but has not been recorded there since 1965. To investigate the current status of the species in China, we conducted interviews, and transect and camera-trap surveys during October 2018–June 2020 to search for signs of hog deer across its historical range in the country. We interviewed 50 local inhabitants and surveyed 14 line transects in four counties of Lincang City, Yunnan Province. The camera traps were deployed in Nangunhe Nature Reserve (39.4 km of transects, 82 camera stations, 15,120 camera days) and Daxueshan Nature Reserve (41.1 km of transects, 68 camera stations, 13,554 camera days). We found no hog deer tracks and no hog deer were trapped by cameras. The floodplain grasslands preferred by hog deer along Nanting River have been transformed into agriculture plantations and human settlements. Our findings suggest that hog deer may have been extirpated from China, most likely as a result of habitat loss and overhunting. The conservation priorities for this species in China are the establishment of a protected area in the Nanting River watershed, restoration of habitat and reintroduction of individuals from range countries.

First records of the flat-headed cat Prionailurus planiceps on the Kampar Peninsula, Sumatra, Indonesia

The flat-headed cat Prionailurus planiceps is one of the rarest small felids, with little known about its distribution, population status or habitat requirements, largely because of the few records of the species. We report here 11 detections of this Endangered species, recorded during 4 years of camera-trap surveys in a peat-swamp forest on the Kampar Peninsula, Riau province, Sumatra. These are the first records of this species on the Kampar Peninsula, in an area of c. 1,300 km2 of peat-swamp forest comprising four adjacent Ecosystem Restoration Concession licences. All records were near water bodies (mean distance 351 m) in lowland peat-swamp forest. These findings add to the existing knowledge of the species' distribution in Sumatra and confirm its presence in these peat-swamp forests. To inform species conservation management planning for the Kampar Peninsula, further research on this species is required.

Male residency of Sunda Clouded Leopard Neofelis diardi (Cuvier, 1823) (Mammalia: Carnivora: Felidae) in a peat swamp forest, Indonesian Borneo

The Sunda Clouded Leopard Neofelis diardi is the apex predator on the island of Borneo, yet little is known of its ecology.  We document the length of residency of male Sunda Clouded Leopards in Central Kalimantan, Indonesian Borneo.  Over 10 years, camera trap data have been obtained in the Sebangau peat swamp forest in a study area of ~ 105km2.  We identified 11 individuals (eight males, one female, and two with unknown sex), from 152 notionally independent photographs.  On average, males remained in the study area for 39.3 months (SE 8.3), or 3.3 years (SE 0.7), ranging from less than a month of residency up to 71 months.  Females were infrequently recorded, possibly as a result of human disturbance and/or high male densities.  Our results reveal that even a 10-year dataset is inadequate to answer some basic ecological questions, emphasising the importance of long-term monitoring of this species.

Suspected Sunda clouded leopard (Neofelis diardi) predation attempts on two reintroduced Bornean orangutans (Pongo pygmaeus wurmbii) in Bukit Batikap Protection Forest, Central Kalimantan, Indonesia

In February 2017 and August 2018, respectively, two Bornean orangutans (Pongo pygmaeus wurmbii) reintroduced into the Bukit Batikap Protection Forest in Central Kalimantan were found in weakened physical condition and with deep puncture wounds. The first individual was a sub-adult male, and the second an adult female whose 6- to 8-week-old infant was missing. Both individuals were rescued and transported back to the field base camp for treatment. Experienced veterinarians treating the injuries reported that the type of wounds appeared consistent with those expected from an attack by a large felid. The Sunda clouded leopard (Neofelis diardi) is the largest felid known to inhabit Bukit Batikap Protection Forest, and we suspect that these cases were unsuccessful predatory attacks by this species. Given the severity of his condition when found, the male orangutan would probably have died without medical intervention; however, both orangutans fully recovered following intensive treatment and were successfully returned to the forest. Predation attempts on orangutans are infrequently reported, thus our observations add to the body of knowledge about possible predation by clouded leopards on reintroduced, rehabilitant orangutans.

Spatio-temporal ecology of sympatric felids on Borneo. Evidence for resource partitioning?

Niche differentiation, the partitioning of resources along one or more axes of a species' niche hyper-volume, is widely recognised as an important mechanism for sympatric species to reduce interspecific competition and predation risk, and thus facilitate co-existence. Resource partitioning may be facilitated by behavioural differentiation along three main niche dimensions: habitat, food and time. In this study, we investigate the extent to which these mechanisms can explain the coexistence of an assemblage of five sympatric felids in Borneo. Using multi-scale logistic regression, we show that Bornean felids exhibit differences in both their broad and fine-scale habitat use. We calculate temporal activity patterns and overlap between these species, and present evidence for temporal separation within this felid guild. Lastly, we conducted an all-subsets logistic regression to predict the occurrence of each felid species as a function of the co-occurrence of a large number of other species and showed that Bornean felids co-occurred with a range of other species, some of which could be candidate prey. Our study reveals apparent resource partitioning within the Bornean felid assemblage, operating along all three niche dimension axes. These results provide new insights into the ecology of these species and the broader community in which they live and also provide important information for conservation planning for this guild of predators.

Down from the treetops: red langur (Presbytis rubicunda) terrestrial behavior

Using direct observations and camera traps at eight sites across Indonesian Borneo we show how red langurs (Presbytis rubicunda) are more terrestrial than previously believed, regularly coming to the ground. This unusual behavior has been found at six of the eight sites surveyed. We find that red langurs come to the ground more frequently in disturbed forests, specifically ones which have been impacted by logging, fire, and hunting, though more data are needed to confirm this as a direct correlation. We also found a trend towards decreased ground use with increased elevation of the habitat. When on the ground, red langurs are predominantly engaged in feeding (50% direct observations, 61% camera traps) and traveling (29% direct observations, 13% camera traps). Red langurs are found on the ground throughout the day, at similar times to activity periods of the apex predator, the Sunda clouded leopard (Neofelis diardi). We suggest that ground use by red langurs could be an adaptation to disturbed forest to exploit additional food sources and to facilitate travel.

An appraisal of Indonesia's immense peat carbon stock using national peatland maps: uncertainties and potential losses from conversion

BACKGROUND

A large proportion of the world's tropical peatlands occur in Indonesia where rapid conversion and associated losses of carbon, biodiversity and ecosystem services have brought peatland management to the forefront of Indonesia's climate mitigation efforts. We evaluated peat volume from two commonly referenced maps of peat distribution and depth published by Wetlands International (WI) and the Indonesian Ministry of Agriculture (MoA), and used regionally specific values of carbon density to calculate carbon stocks.

RESULTS

Peatland extent and volume published in the MoA maps are lower than those in the WI maps, resulting in lower estimates of carbon storage. We estimate Indonesia's total peat carbon store to be within 13.6 GtC (the low MoA map estimate) and 40.5 GtC (the high WI map estimate) with a best estimate of 28.1 GtC: the midpoint of medium carbon stock estimates derived from WI (30.8 GtC) and MoA (25.3 GtC) maps. This estimate is about half of previous assessments which used an assumed average value of peat thickness for all Indonesian peatlands, and revises the current global tropical peat carbon pool to 75 GtC. Yet, these results do not diminish the significance of Indonesia's peatlands, which store an estimated 30% more carbon than the biomass of all Indonesian forests. The largest discrepancy between maps is for the Papua province, which accounts for 62-71% of the overall differences in peat area, volume and carbon storage. According to the MoA map, 80% of Indonesian peatlands are <300 cm thick and thus vulnerable to conversion outside of protected areas according to environmental regulations. The carbon contained in these shallower peatlands is conservatively estimated to be 10.6 GtC, equivalent to 42% of Indonesia's total peat carbon and about 12 years of global emissions from land use change at current rates.

CONCLUSIONS

Considering the high uncertainties in peatland extent, volume and carbon storage revealed in this assessment of current maps, a systematic revision of Indonesia's peat maps to produce a single geospatial reference that is universally accepted would improve national peat carbon storage estimates and greatly benefit carbon cycle research, land use management and spatial planning.

Impacts of land use, restoration, and climate change on tropical peat carbon stocks in the twenty-first century: implications for climate mitigation

The climate mitigation potential of tropical peatlands has gained increased attention as Southeast Asian peatlands are being deforested, drained and burned at very high rates, causing globally significant carbon dioxide (CO₂) emissions to the atmosphere. We used a process-based dynamic tropical peatland model to explore peat carbon (C) dynamics of several management scenarios within the context of simulated twenty-first century climate change. Simulations of all scenarios with land use, including restoration, indicated net C losses over the twenty-first century ranging from 10 to 100 % of pre-disturbance values. Fire can be the dominant C-loss pathway, particularly in the drier climate scenario we tested. Simulated 100 years of oil palm (Elaeis guineensis) cultivation with an initial prescribed burn resulted in 2400-3000 Mg CO₂ ha^-1 total emissions. Simulated restoration following one 25-year oil palm rotation reduced total emissions to 440-1200 Mg CO₂ ha^-1, depending on climate. These results suggest that even under a very optimistic scenario of hydrological and forest restoration and the wettest climate regime, only about one third of the peat C lost to the atmosphere from 25 years of oil palm cultivation can be recovered in the following 75 years if the site is restored. Emissions from a simulated land degradation scenario were most sensitive to climate, with total emissions ranging from 230 to 10,600 Mg CO₂ ha^-1 over 100 years for the wettest and driest dry season scenarios, respectively. The large difference was driven by increased fire probability. Therefore, peat fire suppression is an effective management tool to maintain tropical peatland C stocks in the near term and should be a high priority for climate mitigation efforts. In total, we estimate emissions from current cleared peatlands and peatlands converted to oil palm in Southeast Asia to be 8.7 Gt CO₂ over 100 years with a moderate twenty-first century climate. These emissions could be minimized by effective fire suppression and hydrological restoration.

Scent marking in Sunda clouded leopards (Neofelis diardi): novel observations close a key gap in understanding felid communication behaviours

Intraspecific communication is integral to the behavioural ecology of solitary carnivores, but observing and quantifying their communication behaviours in natural environments is difficult. Our systematic literature review found that basic information on scent marking is completely lacking for 23% of all felid species, and information on 21% of other felid species comes solely from one study of captive animals. Here we present results of the first systematic investigation of the scent marking behaviours of Sunda clouded leopards in the wild. Our observations using motion-triggered video cameras in Indonesian Borneo are novel for clouded leopards, and contrary to previous descriptions of their behaviour. We found that clouded leopards displayed 10 distinct communication behaviours, with olfaction, scraping, and cheek rubbing the most frequently recorded. We also showed that males make repeated visits to areas they previously used for marking and that multiple males advertise and receive information at the same sites, potentially enhancing our ability to document and monitor clouded leopard populations. The behaviours we recorded are remarkably similar to those described in other solitary felids, despite tremendous variation in the environments they inhabit, and close a key gap in understanding and interpreting communication behaviours of clouded leopards and other solitary felids.

Is the clouded leopard Neofelis nebulosa extinct in Taiwan, and could it be reintroduced? An assessment of prey and habitat

During 1997–2012 we conducted a nationwide camera-trapping survey and assessed the availability of prey and habitat for the clouded leopard Neofelis nebulosa in Taiwan. We surveyed 1,249 camera-trap sites over 113,636 camera-trap days, from the seashore to an altitude of 3,796 m and covering various types of vegetation. No clouded leopards were photographed during 128,394 camera-trap days, including at 209 sites in other studies, confirming the presumed extinction of clouded leopards in Taiwan. Assessment of the prey base revealed altitudinal distribution patterns of prey species and prey biomass. Areas at lower altitudes and with less human encroachment and hunting supported a higher prey biomass and more of the typical prey species of clouded leopards. Habitat analysis revealed 8,523 km2 of suitable habitat but this was reduced to 6,734 km2 when adjacent areas of human encroachment were subtracted. In the absence of hunting and large mammalian carnivores the major prey of clouded leopards in Taiwan, such as Formosan macaques Macaca cyclopis, Reeves's muntjacs Muntiacus reevesi, Formosan serow Capricornis swinhoei and sambar Rusa unicolor, could become over-abundant. Thus, it is important to address the cascading effect of the disappearance of top-down predator control. Our assessment indicated that, with proper regulation of hunting, habitat restoration and corridor improvement, it may be possible to reintroduce the clouded leopard.

Assessing the status of wild felids in a highly-disturbed commercial forest reserve in Borneo and the implications for camera trap survey design

The proliferation of camera-trapping studies has led to a spate of extensions in the known distributions of many wild cat species, not least in Borneo. However, we still do not have a clear picture of the spatial patterns of felid abundance in Southeast Asia, particularly with respect to the large areas of highly-disturbed habitat. An important obstacle to increasing the usefulness of camera trap data is the widespread practice of setting cameras at non-random locations. Non-random deployment interacts with non-random space-use by animals, causing biases in our inferences about relative abundance from detection frequencies alone. This may be a particular problem if surveys do not adequately sample the full range of habitat features present in a study region. Using camera-trapping records and incidental sightings from the Kalabakan Forest Reserve, Sabah, Malaysian Borneo, we aimed to assess the relative abundance of felid species in highly-disturbed forest, as well as investigate felid space-use and the potential for biases resulting from non-random sampling. Although the area has been intensively logged over three decades, it was found to still retain the full complement of Bornean felids, including the bay cat Pardofelis badia, a poorly known Bornean endemic. Camera-trapping using strictly random locations detected four of the five Bornean felid species and revealed inter- and intra-specific differences in space-use. We compare our results with an extensive dataset of >1,200 felid records from previous camera-trapping studies and show that the relative abundance of the bay cat, in particular, may have previously been underestimated due to the use of non-random survey locations. Further surveys for this species using random locations will be crucial in determining its conservation status. We advocate the more wide-spread use of random survey locations in future camera-trapping surveys in order to increase the robustness and generality of inferences that can be made.