Sexual and seasonal variation in the diet and foraging behaviour of a sexually dimorphic carnivore, the honey badger (Mellivora capensis)

Limited spatiotemporal niche partitioning among mesocarnivores in Gorongosa National Park, Mozambique

Competition drives community composition and structure in many ecosystems. Spatial and temporal niche partitioning, in which competing species divide the environment in space or time, are mechanisms that may allow for coexistence among ecologically similar species. Such division of resources may be especially important for carnivores in African savannas, which support diverse carnivore assemblages. We used camera traps to explore patterns of spatial and temporal niche partitioning among four mesocarnivore species in Mozambique's Gorongosa National Park: large-spotted genet (Genetta maculata), African civet (Civettictis civetta), honey badger (Mellivora capensis) and marsh mongoose (Atilax paludinosus). We applied a multispecies occupancy model to evaluate spatial partitioning among mesocarnivores and to quantify the environmental factors that affect species-specific habitat use, including relative lion (Panthera leo) activity. We also analyzed the temporal activity overlap of the four focal species. We identified species-specific habitat covariates that influenced detection probabilities but found no evidence of spatial or temporal partitioning among mesocarnivores in the study system. Indeed, we found some evidence for spatial co-occurrence between two of our focal species: African civet and marsh mongoose. There may be limited competition among mesocarnivores in this system, perhaps due to niche and diet differentiation among these species and an abundance of resources. While we found limited evidence that lion activity impacts mesocarnivores, ongoing monitoring of intraguild interactions is vital as apex predator populations recover in the system. This study adds to a growing understanding of African mesocarnivore ecology and highlights the importance of understanding these dynamics for effective multispecies conservation and restoration.

Bayesian Prediction of Multivariate Ecology from Phenotypic Data Yields New Insights into the Diets of Extant and Extinct Taxa

AbstractMorphology often reflects ecology, enabling the prediction of ecological roles for taxa that lack direct observations, such as fossils. In comparative analyses, ecological traits, like diet, are often treated as categorical, which may aid prediction and simplify analyses but ignores the multivariate nature of ecological niches. Furthermore, methods for quantifying and predicting multivariate ecology remain rare. Here, we ranked the relative importance of 13 food items for a sample of 88 extant carnivoran mammals and then used Bayesian multilevel modeling to assess whether those rankings could be predicted from dental morphology and body size. Traditional diet categories fail to capture the true multivariate nature of carnivoran diets, but Bayesian regression models derived from living taxa have good predictive accuracy for importance ranks. Using our models to predict the importance of individual food items, the multivariate dietary niche, and the nearest extant analogs for a set of data-deficient extant and extinct carnivoran species confirms long-standing ideas for some taxa but yields new insights into the fundamental dietary niches of others. Our approach provides a promising alternative to traditional dietary classifications. Importantly, this approach need not be limited to diet but serves as a general framework for predicting multivariate ecology from phenotypic traits.

Optimal prey for red fox cubs-An example of dual optimizing foraging strategy in foxes from a dynamic wetland habitat

The red fox (Vulpes vulpes) is the most abundant mesopredator in the Central European region. Detailed knowledge about their feeding behavior is important both from ecological and wildlife management reasons. Food choices of foxes are poorly predictable in high-biodiversity marshlands. The main aim of our study was to sample parallel the main food-type abundances in the study area and analyze the diet of fox cubs and cohabiting adults across 3 years during the period of maternal dependence of the cubs. According to the optimal foraging theory, we predicted that the cubs' diet would show higher energy content, would be more varied, and the individual prey species fed to the young would be larger. We analyzed the composition of adult fox and cub fecal samples collected separately around dens in a marshland of western Hungary, May 2014, 2017 and 2020, when the abundance values of main food sources differed. Rodents and waterfowl dominated the diet, but their relative occurrence in the samples showed yearly variations. We found that vixens follow a dual optimizing foraging strategy regarding their provisioning of the cubs and their own diet. Adult foxes optimized their diet according to the actual yearly abundances of their main food sources. Additionally, they preferred prey items that can be consumed at the site of capture (large carrion and small individual prey items). Cubs on the other hand were provisioned with optimal high-energy food, even if those in question became less abundant in that year. Vixens mostly fed to their young either larger rodents and waterfowl, or multiple small rodents at a time-these type of prey are both optimal for transportation as a single load. Providing optimal prey at an early age in a changing environment may contribute to the ecological success of the red fox.

Convergent evolution of toxin resistance in animals

Convergence is the phenomenon whereby similar phenotypes evolve independently in different lineages. One example is resistance to toxins in animals. Toxins have evolved many times throughout the tree of life. They disrupt molecular and physiological pathways in target species, thereby incapacitating prey or deterring a predator. In response, molecular resistance has evolved in many species exposed to toxins to counteract their harmful effects. Here, we review current knowledge on the convergence of toxin resistance using examples from a wide range of toxin families. We explore the evolutionary processes and molecular adaptations driving toxin resistance. However, resistance adaptations may carry a fitness cost if they disrupt the normal physiology of the resistant animal. Therefore, there is a trade‐off between maintaining a functional molecular target and reducing toxin susceptibility. There are relatively few solutions that satisfy this trade‐off. As a result, we see a small set of molecular adaptations appearing repeatedly in diverse animal lineages, a phenomenon that is consistent with models of deterministic evolution. Convergence may also explain what has been called ‘autoresistance’. This is often thought to have evolved for self‐protection, but we argue instead that it may be a consequence of poisonous animals feeding on toxic prey. Toxin resistance provides a unique and compelling model system for studying the interplay between trophic interactions, selection pressures and the molecular mechanisms underlying evolutionary novelties.

Electrostatic resistance to alpha-neurotoxins conferred by charge reversal mutations in nicotinic acetylcholine receptors

The evolution of venom resistance through coevolutionary chemical arms races has arisen multiple times throughout animalia. Prior documentation of resistance to snake venom α-neurotoxins consists of the N-glycosylation motif or the hypothesized introduction of arginine at positions 187 at the α-1 nicotinic acetylcholine receptor orthosteric site. However, no further studies have investigated the possibility of other potential forms of resistance. Using a biolayer interferometry assay, we first confirm that the previously hypothesized resistance conferred by arginine at position 187 in the honey badger does reduce binding to α-neurotoxins, which has never been functionally tested. We further discovered a novel form of α-neurotoxin resistance conferred by charge reversal mutations, whereby a negatively charged amino acid is replaced by the positively charged amino acid lysine. As venom α-neurotoxins have evolved strong positive charges on their surface to facilitate binding to the negatively charged α-1 orthosteric site, these mutations result in a positive charge/positive charge interaction electrostatically repelling the α-neurotoxins. Such a novel mechanism for resistance has gone completely undiscovered, yet this form of resistance has convergently evolved at least 10 times within snakes. These coevolutionary innovations seem to have arisen through convergent phenotypes to ultimately evolve a similar biophysical mechanism of resistance across snakes.

Blessing the rains down in Africa: spatiotemporal behaviour of the crested porcupine

The assessment of habitat selection and temporal patterns of activity rhythms is paramount for wildlife conservation. Studies on behavioural ecology of wild mammals are particularly challenging in tropical areas, mostly when involving rare or elusive species. Despite being a common species in Italy, the crested porcupine Hystrix cristata is threatened of extinction throughout most of its sub-Saharan range. All available information on the ecology of this species has been collected in Italy, whereas no data is present in the scientific literature on spatiotemporal behaviour of this large rodent in Africa. In this work, we attempted to determine habitat selection and temporal patterns of activity rhythms of the crested porcupine in northern Benin and neighbouring countries, through intensive camera-trapping. We collected a total of 146 records of crested porcupine, 91 in the dry season (October-March) and 55 in the rainy season (April-September). Porcupines used most habitats in proportion to their local availability, while selecting rock outcrop formations (possibly used as shelter sites) and avoiding open areas, wetlands and gallery forests. A mostly nocturnal behaviour was confirmed throughout the year, with some diurnal activity at the start and at the end of the rainy season. The importance of rains in determining birth peak has been also showed, with juvenile individuals always observed at the start and at the end of the rainy season. Full moon always inhibited activity of this large rodent, most likely evolved as an antipredatory behaviour to limit encounters with potential predators (common leopard Panthera pardus, spotted hyaena Crocuta crocuta and honey badger Mellivora capensis) and humans. Poaching pressure towards porcupines in West Africa is strong. Porcupines are killed for the traditional medicine, for their meat and because they are widely considered as a crop pest. This assessment should therefore be used as a basic tool to design conservation plans to preserve this rodent species in its native range.

Scavenger activity in a peri-urban agricultural setting in the Highveld of South Africa

Scavenging animals often scatter skeletal remains of forensic interest and cause scavenging damage. This study aimed to identify scavenging animals in the peri-urban agricultural Highveld of South Africa, describe their scattering patterns, and the damage they cause to bone. Ten pig carcasses (Sus scrofa domesticus) (40-80 kg) were placed at the University of Pretoria's Mierjie Le Roux Experimental Farm (Highveld) in summer and winter. Motion-activated cameras recorded the scavenging. Scavenger species were identified and their behaviors, scattering pattern, and the damage they cause to bone were described. Scavenging was primarily by black-backed jackals; however, mongooses (slender, yellow, and water mongoose), Cape porcupine, and honey badger were also active. Remains were commonly scattered in two directions by jackals. The distance of scattering was heavily influenced by fencing. The remains were scattered within a maximum radius of 73.7 m. The remains were scavenged and skeletonized faster in summer. Jackals caused minimal damage to bone, isolated to superficial, nonspecific scores, furrows, and punctures. A few mongoose bone alterations were present as jagged gnaw marks on the angle of the mandible and gnawing of the vertebral spinous process. Cape porcupine bone damage included gnaw marks on the condyle of a femur and head of humerus, and destruction of the proximal and distal ends of a tibia. The described scattering pattern and bone modification patterns will assist in the recovery and analysis of scavenged remains found in peri-urban agricultural areas in South Africa.

Dietary complexity and hidden costs of prey switching in a generalist top predator

Variation in predator diet is a critical aspect of food web stability, health, and population dynamics of predator/ prey communities. Quantifying diet, particularly among cryptic species, is extremely challenging, however, and differentiation between demographic subsets of populations is often overlooked.We used prey remains and data taken postmortem from otter Lutra lutra to determine the extent to which dietary variation in a top predator was associated with biotic, spatial, and temporal factors.Biotic data (e.g., sex, weight, and length) and stomach contents were taken from 610 otters found dead across England and Wales between 1994 and 2010. Prey remains were identified to species where possible, using published keys and reference materials. Multi-model inference followed by model prediction was applied to test for and visualize the nature of associations.Evidence for widespread decline in the consumption of eels (Anguilla anguilla) reflected known eel population declines. An association between eel consumption and otter body condition suggested negative consequences for otter nutrition. Consumption of Cottus gobio and stickleback spp. increased, but was unlikely to compensate (there was no association with body condition). More otters with empty stomachs were found over time. Otter sex, body length, and age-class were important biotic predictors of the prey species found, and season, region, and distance from the coast were important abiotic predictors.Our study is unique in its multivariate nature, broad spatial scale, and long-term dataset. Inclusion of biotic data allowed us to reveal important differences in costs and benefits of different prey types, and differences between demographic subsets of the population, overlaid on spatial and temporal variation. Such complexities in otter diet are likely to be paralleled in other predators, and detailed characterization of diet should not be overlooked in efforts to conserve wild populations.

Venom Resistance as a Model for Understanding the Molecular Basis of Complex Coevolutionary Adaptations

SynopsisVenom and venom resistance are molecular phenotypes widely considered to have diversified through coevolution between predators and prey. However, while evolutionary and functional studies on venom have been extensive, little is known about the molecular basis, variation, and complexity of venom resistance. We review known mechanisms of venom resistance and relate these mechanisms to their predicted impact on coevolutionary dynamics with venomous enemies. We then describe two conceptual approaches which can be used to examine venom/resistance systems. At the intraspecific level, tests of local adaptation in venom and resistance phenotypes can identify the functional mechanisms governing the outcomes of coevolution. At deeper evolutionary timescales, the combination of phylogenetically informed analyses of protein evolution coupled with studies of protein function promise to elucidate the mode and tempo of evolutionary change on potentially coevolving genes. We highlight case studies that use each approach to extend our knowledge of these systems as well as address larger questions about coevolutionary dynamics. We argue that resistance and venom are phenotypic traits which hold exceptional promise for investigating the mechanisms, dynamics, and outcomes of coevolution at the molecular level. Furthermore, extending the understanding of single gene-for-gene interactions to the whole resistance and venom phenotypes may provide a model system for examining the molecular and evolutionary dynamics of complex multi-gene interactions.

Similar burrow architecture of three arid-zone scorpion species implies similar ecological function

Many animals reside in burrows that may serve as refuges from predators and adverse environmental conditions. Burrow design varies widely among and within taxa, and these structures are adaptive, fulfilling physiological (and other) functions. We examined the burrow architecture of three scorpion species of the family Scorpionidae: Scorpio palmatus from the Negev desert, Israel; Opistophthalmus setifrons, from the Central Highlands, Namibia; and Opistophthalmus wahlbergii from the Kalahari desert, Namibia. We hypothesized that burrow structure maintains temperature and soil moisture conditions optimal for the behavior and physiology of the scorpion. Casts of burrows, poured in situ with molten aluminum, were scanned in 3D to quantify burrow structure. Three architectural features were common to the burrows of all species: (1) a horizontal platform near the ground surface, long enough to accommodate the scorpion, located just below the entrance, 2-5 cm under the surface, which may provide a safe place where the scorpion can monitor the presence of potential prey, predators, and mates and where the scorpion warms up before foraging; (2) at least two bends that might deter incursion by predators and may reduce convective ventilation, thereby maintaining relatively high humidity and low temperature; and (3) an enlarged terminal chamber to a depth at which temperatures are almost constant (±2-4 °C). These common features among the burrows of three different species suggest that they are important for regulating the physical environment of their inhabitants and that burrows are part of scorpions' "extended physiology" (sensu Turner, Physiol Biochem Zool 74:798-822, 2000).

Seasonal variation in the voluntary food intake of domesticated cats (Felis catus)

There are numerous reports about seasonal cycles on food intake in animals but information is limited in dogs and cats. A 4-year prospective, observational, cohort study was conducted to assess differences in food intake in 38 ad-libitum-fed adult colony cats, of various breeds, ages and genders. Individual food intake was recorded on a daily basis, and the mean daily intake for each calendar month was calculated. These data were compared with climatic data (temperature and daylight length) for the region in the South of France where the study was performed. Data were analysed using both conventional statistical methods and by modelling using artificial neural networks (ANN). Irrespective of year, an effect of month was evident on food intake (P<0.001), with three periods of broadly differing intake. Food intake was least in the summer months (e.g. June, to August), and greatest during the months of late autumn and winter (e.g. October to February), with intermediate intake in the spring (e.g. March to May) and early autumn (e.g. September). A seasonal effect on bodyweight was not recorded. Periods of peak and trough food intake coincided with peaks and troughs in both temperature and daylight length. In conclusion, average food intake in summer is approximately 15% less than food intake during the winter months, and is likely to be due to the effects of outside temperatures and differences in daylight length. This seasonal effect in food intake should be properly considered when estimating daily maintenance energy requirements in cats.

Snake-venom resistance as a mammalian trophic adaptation: lessons from didelphid marsupials

Mammals that prey on venomous snakes include several opossums (Didelphidae), at least two hedgehogs (Erinaceidae), several mongooses (Herpestidae), several mustelids, and some skunks (Mephitidae). As a group, these taxa do not share any distinctive morphological traits. Instead, mammalian adaptations for ophiophagy seem to consist only in the ability to resist the toxic effects of snake venom. Molecular mechanisms of venom resistance (as indicated by biochemical research on opossums, mongooses, and hedgehogs) include toxin-neutralizing serum factors and adaptive changes in venom-targeted molecules. Of these, toxin-neutralizing serum factors have received the most research attention to date. All of the toxin-neutralizing serum proteins discovered so far in both opossums and mongooses are human α1B-glycoprotein homologs that inhibit either snake-venom metalloproteinases or phospholipase A(2) myotoxins. By contrast, adaptive changes in venom-targeted molecules have received far less attention. The best-documented examples include amino-acid substitutions in mongoose nicotinic acetylcholine receptor that inhibit binding by α-neurotoxins, and amino-acid substitutions in opossum von Willebrand factor (vWF) that are hypothesized to weaken the bond between vWF and coagulopathic C-type lectins. Although multiple mechanisms of venom resistance are known from some species, the proteomic complexity of most snake venoms suggests that the evolved biochemical defences of ophiophagous mammals are likely to be far more numerous than currently recognized. Whereas most previous research in this field has been motivated by the potential for medical applications, venom resistance in ophiophagous mammals is a complex adaptation that merits attention from comparative biologists. Unfortunately, evolutionary inference is currently limited by ignorance about many relevant facts that can only be provided by future research.

Agitated honeybees exhibit pessimistic cognitive biases

Whether animals experience human-like emotions is controversial and of immense societal concern [1–3]. Because animals cannot provide subjective reports of how they feel, emotional state can only be inferred using physiological, cognitive, and behavioral measures [4–8]. In humans, negative feelings are reliably correlated with pessimistic cognitive biases, defined as the increased expectation of bad outcomes [9–11]. Recently, mammals [12–16] and birds [17–20] with poor welfare have also been found to display pessimistic-like decision making, but cognitive biases have not thus far been explored in invertebrates. Here, we ask whether honeybees display a pessimistic cognitive bias when they are subjected to an anxiety-like state induced by vigorous shaking designed to simulate a predatory attack. We show for the first time that agitated bees are more likely to classify ambiguous stimuli as predicting punishment. Shaken bees also have lower levels of hemolymph dopamine, octopamine, and serotonin. In demonstrating state-dependent modulation of categorization in bees, and thereby a cognitive component of emotion, we show that the bees' response to a negatively valenced event has more in common with that of vertebrates than previously thought. This finding reinforces the use of cognitive bias as a measure of negative emotional states across species and suggests that honeybees could be regarded as exhibiting emotions.

Video Abstract

Seasonal and ontogenetic changes in movement patterns of sixgill sharks

Background

Understanding movement patterns is fundamental to population and conservation biology. The way an animal moves through its environment influences the dynamics of local populations and will determine how susceptible it is to natural or anthropogenic perturbations. It is of particular interest to understand the patterns of movement for species which are susceptible to human activities (e.g. fishing), or that exert a large influence on community structure, such as sharks.

Methodology/Principal Findings

We monitored the patterns of movement of 34 sixgill sharks Hexanchus griseus using two large-scale acoustic arrays inside and outside Puget Sound, Washington, USA. Sixgill sharks were residents in Puget Sound for up to at least four years before making large movements out of the estuary. Within Puget Sound, sixgills inhabited sites for several weeks at a time and returned to the same sites annually. Across four years, sixgills had consistent seasonal movements in which they moved to the north from winter to spring and moved to the south from summer to fall. Just prior to leaving Puget Sound, sixgills altered their behavior and moved twice as fast among sites. Nineteen of the thirty-four sixgills were detected leaving Puget Sound for the outer coast. Three of these sharks returned to Puget Sound.

Conclusions/Significance

For most large marine predators, we have a limited understanding of how they move through their environment, and this clouds our ability to successfully manage their populations and their communities. With detailed movement information, such as that being uncovered with acoustic monitoring, we can begin to quantify the spatial and temporal impacts of large predators within the framework of their ecosystems.

Diet mixing in an aquatic carnivore, the harbour seal

To determine the effects of diet mixing on digestive performance, harbour seals (Phoca vitulina L., 1758) were offered either pure diets of Pacific herring (Clupea pallasii Valenciennes, 1847) or walleye pollock (Theragra chalcogramma (Pallas, 1814)) or a 1:1 mix of herring and pollock. Regardless of diet, retention time decreased approximately 40% as intake quadrupled. The mean apparent digestible dry matter (ADDM) was greatest on mixed diets during low feeding frequency trials; ADDM during high feeding frequency trials was significantly reduced as intake increased for animals on the single-species (pollock or herring) diets. As intake increased, up to 45% more digestible energy was assimilated from the mixed diet than from either single-species diet. The findings of this study suggest that a mixed diet consisting of prey differing in lipid and protein amounts increased digestible energy intake in harbour seals. Our measures of intake and ADDM in harbour seals revealed digestive flexibility and indicated that digestion in harbour seals was more efficient on a mixed diet.

Blubber fatty acids of gray seals reveal sex differences in the diet of a size-dimorphic marine carnivore

Sex differences in foraging behaviour have been attributed to size dimorphism, niche divergence, and sex-specific fitness-maximizing strategies. Although sex differences in diving behaviour of marine carnivores are thought to result in sex differences in diet, this is not known for any species over temporal scales relevant to life-history characteristics. We examined blubber fatty acid (FA) profiles of gray seals, Halichoerus grypus (Fabricius, 1791), a sexually size-dimorphic species in which sex differences in foraging behaviour have been observed. FA profiles reflect prey consumed over a period of weeks or months. FA profiles of adult males and females varied significantly by season but there was a season by sex interaction, indicating that seasonal changes in diet differed by sex. FA profiles of adults also varied interannually, with a significant sex by year interaction. Interannual variability may have been a response to changes in ocean-bottom temperatures affecting prey availability or changes in prey abundance. Adult FA profiles differed from those of 6-month-old juveniles; however, there was no evidence of sex differences in the diet of younger animals. Our results indicate that sex differences in the foraging behaviour of adults are reflected in differences in diet at multiple temporal scales.