The potential use of n-alkanes, long-chain alcohols and long-chain fatty acids as diet composition markers: indoor validation with sheep and herbage species from the rangeland of Inner Mongolia of China

Field Experiments of Phyto-Stabilization, Biochar-Stabilization, and Their Coupled Stabilization of Soil Heavy Metal Contamination around a Copper Mine Tailing Site, Inner Mongolia

A field trial was conducted in Inner Mongolia to evaluate the stabilization effects of phyto-stabilization, biochar-stabilization, and their coupled stabilization for As, Cu, Pb, and Zn in soil. Stabilization plants (Achnatherum splendens, Puccinellia chinampoensis, and Chinese small iris) and biochar (wood charcoals and chelator-modified biochar) were introduced in the field trial. The acid-extractable fraction and residual fraction of the elements were extracted following a three-stage modified procedure to assess the stabilization effect. The results after 60 days showed that the coupled stabilization produced a better stabilization effect than biochar-/phyto- stabilization alone. Achnatherum splendens and Puccinellia chinampoensis were found to activate the target elements: the residual fraction proportion of As, Cu, Pb, and Zn decreased while the acid-extractable fraction proportion of Cu and Zn increased in the corresponding planting area. Neither type of biochar produced a notable stabilization effect. The residual fraction proportion of As (20.8–84.0%, 29.2–82%), Pb (31.6–39.3%, 32.1–48.9%), and Zn (30.0–36.2%, 30.1–41.4%) increased, while the acid-extractable fraction proportion remained nearly unchanged after treatment using Chinese small iris-straw biochar or Achnatherum splendens-straw biochar, respectively. The results indicate that phyto-stabilization or biochar-stabilization alone are not suitable, whereas the coupled stabilization approach is a more efficient choice.

Using Fecal DNA Metabarcoding to Investigate Foraging Reveals the Effects of Specific Herbage on the Improved n-3 Fatty Acid (PUFA) Composition in the Longissimus Dorsi Muscle of Grazing Tan Sheep

Understanding the natural diet of grazing sheep can help fulfill their nutritional requirements and positively affect the quality of their meat. Emerging fecal DNA (fDNA) metabarcoding technology can provide more accurate estimates for the dietary composition of free-ranging animals. This study has shown that pasture feeding can promote deposition of n-3 polyunsaturated fatty acids (PUFAs) in Tan lambs' muscle and decrease the ratio of n-6/n-3 fatty acids (FAs), and thus, we investigated the dietary composition of grazing lambs using fDNA metabarcoding to assess the prevalence of medicinal herbage plants in their diet. Herein, based on the full-time natural pasture grazing and 4-h natural pasture grazing with indoor feeding patterns, the herbage taxa (Bassia scoparia, Euphorbia humifusa, Arnebia euchroma, and Salsola sp.) most correlated to n-3 PUFAs were highlighted to elucidate how diversification in dietary components was associated with the muscle FA profile of lambs. Our findings provide experimental evidence for future feeding research.

The potential application of plant wax markers from alfalfa for estimating the total feed intake of sheep

Estimating the feed intake of grazing herbivores is critical for determining their nutrition, overall productivity and utilization of grassland resources. A 17-day indoor feeding experiment was conducted to evaluate the potential use of Medicago sativa as a natural supplement for estimating the total feed intake of sheep. A total of 16 sheep were randomly assigned to four diets (four sheep per diet) containing a known amount of M. sativa together with up to seven forages common to typical steppes. The diets were: diet 1, M. sativa + Leymus chinensis + Puccinellia distans; diet 2, species in diet 1 + Phragmites australis; diet 3, species in diet 2 + Chenopodium album + Elymus sibiricus; and diet 4, species in diet 3 + Artemisia scoparia + Artemisia tanacetifolia. After faecal marker concentrations were corrected by individual sheep recovery, treatment mean recovery or overall recovery, the proportions of M. sativa and other dietary forages were estimated from a combination of alkanes and long-chain alcohols using a least-square procedure. Total intake was the ratio of the known intake of M. sativa to its estimated dietary proportion. Each dietary component intake was obtained using total intake and the corresponding dietary proportions. The estimated values were compared with actual values to assess the estimation accuracy. The results showed that M. sativa exhibited a distinguishable marker pattern in comparison to the other dietary forage species. The accuracy of the dietary composition estimates was significantly (P < 0.001) affected by both diet diversity and the faecal recovery method. The proportion of M. sativa and total intake across all diets could be accurately estimated using the individual sheep or the treatment mean recovery methods. The largest differences between the estimated and observed total intake were 2.6 g and 19.2 g, respectively, representing only 0.4% and 2.6% of the total intake. However, they were significantly (P < 0.05) biased for most diets when using the overall recovery method. Due to the difficulty in obtaining individual sheep recovery under field conditions, treatment mean recovery is recommended. This study suggests that M. sativa, a natural roughage instead of a labelled concentrate, can be utilized as a dietary supplement to accurately estimate the total feed intake of sheep indoors and further indicates that it has potential to be used in steppe grassland of northern China, where the marker patterns of M. sativa differ markedly from commonly occurring plant species.

Choices between red clover and fescue in the diet can be reliably estimated in heifers post-weaning using n-alkanes

Measuring diet choice in grazing animals is challenging, complicating the assessment of feed efficiency in pasture-based systems. Furthermore, animals may modify their intake of a forage species depending on its nutritive value and on their own physiological status. Various fecal markers have been used to estimate feed intake in grazing animals. However, plant-wax markers such as n-alkanes (ALK) and long-chain alcohols may provide reliable estimates of both dietary choices and intakes. Still, their use in beef cattle has been relatively limited. The present study was designed to test the reliability of the ALK technique to estimate diet choices in beef heifers. Twenty-two Angus-cross heifers were evaluated at both post-weaning and yearling age. At each age, they were offered both red clover and fescue hay as cubes. Following 3-week acclimation periods, daily intake of each forage species was assessed daily for 10 days. During the final 5 days, fecal grab samples were collected twice daily. The ALK fecal concentrations were adjusted using recovery fractions compiled from literature. Diet composition was estimated using two statistical methods. Post-weaning, dietary choices were reliably estimated, with low residual error, regardless of the statistical approach adopted. The regression of observed on estimated red clover proportion ranged from 0.85±0.08 to 1.01±0.09 for fecal samples collected in the p.m. and for daily proportions once averaged, respectively. However, at yearling age, the estimates were less reliable. There was a tendency to overestimate the red clover proportion in diets of heifers preferring fescue, and vice versa. This was due to greater variability in ALK fecal concentrations in the yearling heifers. Overall, the ALK technique provided a reliable tool for estimating diet choice in animals fed a simple forage diet. Although further refinements in the application of this methodology are needed, plant-wax markers provide opportunities for evaluating diet composition in grazing systems in cattle.

Assessment of diet composition of free-ranging addax antelopes (Addaxnasomaculatus) by the combination of microhistological procedures andn-alkanes and long-chain alcohols as fecal markers

Understanding herbivore foraging behaviour is crucial for adequate wildlife management decisions. This study assessed the diet composition of free-ranging addax antelope (Addax nasomaculatus (de Blainville, 1816)). Samples collected during the spring season were analyzed using microhistological procedures along with n-alkanes and long-chain alcohols as fecal markers. Twelve animals were monitored and fresh fecal samples were collected daily during a 7-day period. Diet composition estimates obtained by both methods were similar and indicate that Stipagrostis pungens (Desf.) De Winter was the main diet component followed by Fagonia glutinosa Delile, Helianthemum kahiricum Delile, and Hammada schmittiana (Pomel.) Botsch. Data showed that addax have mixed diets composed of perennial woody and herbaceous plant species depending on their availability. The four species most selected by the animals were also the most abundant species in terms of plant cover. In contrast, species that accounted for less than 5% of the plant cover were not present in the fecal samples. Results of this study represent a single grazing season, and for that reason, further studies are required to fully understand how the grazing behaviour of addax varies with seasonal changes in vegetation cover.

Herbivore-Diet Analysis Based on Illumina MiSeq Sequencing: The Potential Use of an ITS2-Barcoding Approach to Establish Qualitative and Quantitative Predictions of Diet Composition of Mongolian Sheep

DNA-barcoding approaches to estimate the diet compositions of grazing animals have received significant attention, and particularly when combined with next-generation sequencing, these techniques have substantially improved in recent years. In this study, the identity and species composition of plant material ingested by Mongolian sheep were estimated through the use of 350 bp ITS2 gene sequences of the vegetation found in fecal samples. Four diets were formulated using varying amounts of eight plant species that are common in the grasslands of northern China. Sixteen Mongolian sheep were taken from pastures and randomly assigned to four groups, and each group received one of four diets. Each sheep was randomly assigned to one of 16 confinement pens and fed its respective diet for 12 consecutive days. Fecal samples were removed from each pen from days 7-12, preserved, and composited for each pen. All herbage species included in the daily diets were detected in each fecal sample, with the exception of Phragmites australis. Moreover, 12 additional different plant species were retrieved from feces of the experimental sheep. The obtained data provided preliminary support for the use of the ITS2 barcode to determine which plants were consumed. Moreover, the proportions of the herbage DNA sequences recovered from sheep feces and those of the herbage masses in the daily diets did not completely match. These results indicate that the non-Gramineae DNA sequences amplified with ITS2 primers (including those of Chenopodium album, Artemisia scoparia, Artemisia tanacetifolia, and Medicago sativa) far exceeded those of the Gramineae species (including Leymus chinensis and Puccinellia distans), which constitute the largest share of the experimental diets. A significant positive correlation (Spearman's ρ = 0.376, P = 0.003) between the actual herbage mass proportions in the experimental diets and the herbage-DNA-sequence proportions provided sufficiently favorable support for the further investigation of DNA barcoding for the quantification of plants in feces. A significant regression coefficient was found between the relative DNA-sequence proportions of L. chinensis ( R² = 0.82, P < 0.0001), P. distans ( R² = 0.64, P = 0.0017), and C. album ( R² = 0.98, P < 0.0001) and their respective herbage mass proportions. The quantitative relationship can be expressed by the linear-regression equations y = 0.90 x - 0.22, y = 0.98 x - 0.03, and y = 5.00 x - 0.25, respectively. Thus, these results demonstrate that dietary-DNA-barcoding methods exhibited potential in providing valuable quantitative information regarding food-item components. However, it should be noted that this explorative data needs to be further improved by using additional genes and by creating a sophisticated reference database, thus enhancing both quality and accuracy of the obtained results.

Combination of long-chain alcohols and fatty acids with alkanes as faecal markers to estimate feed intake and digestibility in horses and cattle fed on grass-heathland vegetation communities

Application of long-chain alcohols (LCOH) and long-chain fatty acids (LCFA) combined with alkanes as faecal markers to estimate dry matter intake (DMI) and dry matter digestibility (DMD) of equines and cattle was assessed. Six crossbred mares, randomly divided in two groups (H1 and H2), and three nonlactating cows (C) were housed in individual stalls. Groups H1 and C were fed on a diet of ryegrass (Lolium perenne, 0.7) and heather (Erica spp., Calluna vulgaris, 0.3), and H2 received ryegrass (0.4), heather (0.3) and gorse (Ulex gallii, 0.3). Digestibility was estimated using LCOH (C28-OH and C30-OH) and LCFA (C28-FA, C30-FA, and C32-FA) as internal markers. For DMI estimation, animals received daily a paper pellet containing C24, C32, and C36n-alkanes. Intake was estimated from the faecal ratio of naturally occurring LCOH, LCFA, and dosed n-alkanes, and was compared with the known DMI values. In horses, all markers provided accurate estimates of DMD. Similarly, LCOH provided accurate estimates of DMD in cattle, whereas LCFA underestimated it (P < 0.05). Intake estimates were affected (P < 0.05) by the marker pair used in calculations. In general, the C24:C24-FA pair provided the most accurate DMI estimates. Results suggest the usefulness of combining epicuticular compounds as faecal markers to estimate DMI, DMD and diet composition of horses and cattle grazing grass-heathland communities, simultaneously.

Use of n-alkanes for determination of Kikuyu grass (Pennisetum clandestinum) intake in free-range broilers

N-alkanes, long-chained saturated hydrocarbons occurring in plant cuticles, were used for estimating grass intake in fast-growing, free-range broilers. A total of 1440 as hatched mixed sex Cobb 500 broilers were equally divided between one of four experimental treatments in a 2 by 2 factorial arrangement involving conventional (barn) or free-range (barn and range access) production systems and diets (crude protein: 21%, metabolisable energy: 13 MJ/K) with or without in-feed antibiotic (Zinc Bacitracin: Albac® G 150 antibiotic feed premix, Pfizer Australia Pty Ltd, Sydney, NSW, Australia). Day-old chicks were randomly allocated to 48 pens (12 replicates/treatment) with 30 birds in each pen. Chicks were assigned to treatment diets on Day 1 while free-range access was available to birds from Day 21 onwards. Alkane concentrations in litter were measured and compared with alkane profiles of the intake components (grass, diet pellets and woodchip). Correction for incomplete recovery followed by estimation using a non-negative least square procedure resulted in calculation of total grass intake from the range area. Kikuyu grass consumption was estimated to be 13.5–14.7% of total ‘as-fed’ intake, equating to 6.34–6.78 g of grass per bird per hour of range access in this study. Taking into account grass consumption, this resulted in a significant increase in feed intake by 8.7–8.9% (P < 0.01) and feed conversion ratio from 2.30 to 2.54 points (P < 0.01). It can be concluded that broilers reared under free-range conditions eat a substantial quantity of grass. However, the nutrient profile of grass is not complementary to the formulated ration and its consumption is likely to lead to an array of nutritional changes for the bird, thus affecting performance.