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For: Sweet SMM, Mardakheh FK, Ryan KJP, Langton AJ, Heath JK, Cooper HJ. Targeted online liquid chromatography electron capture dissociation mass spectrometry for the localization of sites of in vivo phosphorylation in human Sprouty2. Anal Chem 2008;80:6650-7. [PMID: 18683950 DOI: 10.1021/ac800963a] [Citation(s) in RCA: 26] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/20/2023]
Number Cited by Other Article(s)
1
Xu F, Yang T, Sheng Y, Zhong T, Yang M, Chen Y. Simultaneous Quantification of Protein Phosphorylation Sites using Liquid Chromatography–Tandem Mass Spectrometry-Based Targeted Proteomics: A Linear Algebra Approach for Isobaric Phosphopeptides. J Proteome Res 2014;13:5452-60. [DOI: 10.1021/pr500339u] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
2
Stefanowicz P, Kijewska M, Szewczuk Z. Does Electron Capture Dissociation (ECD) Provide Quantitative Information on the Chemical Modification of Lysine Side Chains in Proteins? The Glycation of Ubiquitin. Anal Chem 2014;86:7247-51. [DOI: 10.1021/ac501329g] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/11/2023]
3
Shvartsburg AA, Zheng Y, Smith RD, Kelleher NL. Separation of variant methylated histone tails by differential ion mobility. Anal Chem 2012;84:6317-20. [PMID: 22812477 PMCID: PMC3418378 DOI: 10.1021/ac301541r] [Citation(s) in RCA: 41] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
4
Courcelles M, Bridon G, Lemieux S, Thibault P. Occurrence and Detection of Phosphopeptide Isomers in Large-Scale Phosphoproteomics Experiments. J Proteome Res 2012;11:3753-65. [DOI: 10.1021/pr300229m] [Citation(s) in RCA: 24] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/24/2022]
5
Shvartsburg AA, Zheng Y, Smith RD, Kelleher NL. Ion mobility separation of variant histone tails extending to the "middle-down" range. Anal Chem 2012;84:4271-6. [PMID: 22559289 PMCID: PMC3353003 DOI: 10.1021/ac300612y] [Citation(s) in RCA: 38] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/17/2023]
6
Ibrahim YM, Shvartsburg AA, Smith RD, Belov ME. Ultrasensitive identification of localization variants of modified peptides using ion mobility spectrometry. Anal Chem 2011;83:5617-23. [PMID: 21692493 PMCID: PMC3136632 DOI: 10.1021/ac200719n] [Citation(s) in RCA: 31] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/08/2023]
7
Shvartsburg AA, Singer D, Smith RD, Hoffmann R. Ion mobility separation of isomeric phosphopeptides from a protein with variant modification of adjacent residues. Anal Chem 2011;83:5078-85. [PMID: 21667994 PMCID: PMC3139565 DOI: 10.1021/ac200985s] [Citation(s) in RCA: 44] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]
8
Palumbo AM, Smith SA, Kalcic CL, Dantus M, Stemmer PM, Reid GE. Tandem mass spectrometry strategies for phosphoproteome analysis. MASS SPECTROMETRY REVIEWS 2011;30:600-25. [PMID: 21294150 DOI: 10.1002/mas.20310] [Citation(s) in RCA: 103] [Impact Index Per Article: 7.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/24/2023]
9
Jones AW, Cooper HJ. Dissociation techniques in mass spectrometry-based proteomics. Analyst 2011;136:3419-29. [DOI: 10.1039/c0an01011a] [Citation(s) in RCA: 35] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]
10
Nbr1 is a novel inhibitor of ligand-mediated receptor tyrosine kinase degradation. Mol Cell Biol 2010;30:5672-85. [PMID: 20937771 DOI: 10.1128/mcb.00878-10] [Citation(s) in RCA: 39] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]  Open
11
Shvartsburg AA, Creese AJ, Smith RD, Cooper HJ. Separation of peptide isomers with variant modified sites by high-resolution differential ion mobility spectrometry. Anal Chem 2010;82:8327-34. [PMID: 20843012 PMCID: PMC2973842 DOI: 10.1021/ac101878a] [Citation(s) in RCA: 71] [Impact Index Per Article: 5.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/21/2023]
12
Sun Q, Jackson RA, Ng C, Guy GR, Sivaraman J. Additional serine/threonine phosphorylation reduces binding affinity but preserves interface topography of substrate proteins to the c-Cbl TKB domain. PLoS One 2010;5:e12819. [PMID: 20877636 PMCID: PMC2943896 DOI: 10.1371/journal.pone.0012819] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/15/2010] [Accepted: 08/23/2010] [Indexed: 12/20/2022]  Open
13
Cunningham DL, Sweet SMM, Cooper HJ, Heath JK. Differential phosphoproteomics of fibroblast growth factor signaling: identification of Src family kinase-mediated phosphorylation events. J Proteome Res 2010;9:2317-28. [PMID: 20225815 PMCID: PMC2950672 DOI: 10.1021/pr9010475] [Citation(s) in RCA: 43] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/16/2009] [Indexed: 01/12/2023]
14
Johnson H, Eyers CE. Analysis of post-translational modifications by LC-MS/MS. Methods Mol Biol 2010;658:93-108. [PMID: 20839099 DOI: 10.1007/978-1-60761-780-8_5] [Citation(s) in RCA: 24] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/07/2023]
15
Edwin F, Anderson K, Patel TB. HECT domain-containing E3 ubiquitin ligase Nedd4 interacts with and ubiquitinates Sprouty2. J Biol Chem 2009;285:255-64. [PMID: 19864419 DOI: 10.1074/jbc.m109.030882] [Citation(s) in RCA: 36] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]  Open
16
Mardakheh FK, Yekezare M, Machesky LM, Heath JK. Spred2 interaction with the late endosomal protein NBR1 down-regulates fibroblast growth factor receptor signaling. ACTA ACUST UNITED AC 2009;187:265-77. [PMID: 19822672 PMCID: PMC2768835 DOI: 10.1083/jcb.200905118] [Citation(s) in RCA: 42] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/08/2023]
17
Bailey CM, Sweet SMM, Cunningham DL, Zeller M, Heath JK, Cooper HJ. SLoMo: automated site localization of modifications from ETD/ECD mass spectra. J Proteome Res 2009;8:1965-71. [PMID: 19275241 DOI: 10.1021/pr800917p] [Citation(s) in RCA: 79] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
18
Xuan Y, Creese AJ, Horner JA, Cooper HJ. High-field asymmetric waveform ion mobility spectrometry (FAIMS) coupled with high-resolution electron transfer dissociation mass spectrometry for the analysis of isobaric phosphopeptides. RAPID COMMUNICATIONS IN MASS SPECTROMETRY : RCM 2009;23:1963-1969. [PMID: 19504484 DOI: 10.1002/rcm.4101] [Citation(s) in RCA: 72] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/25/2023]
19
Edwin F, Anderson K, Ying C, Patel TB. Intermolecular interactions of Sprouty proteins and their implications in development and disease. Mol Pharmacol 2009;76:679-91. [PMID: 19570949 DOI: 10.1124/mol.109.055848] [Citation(s) in RCA: 86] [Impact Index Per Article: 5.7] [Reference Citation Analysis] [Abstract] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]  Open
20
Liu N, Chan W, Lee KC, Cai Z. A method to enhance a1 ions and application for peptide sequencing and protein identification. JOURNAL OF THE AMERICAN SOCIETY FOR MASS SPECTROMETRY 2009;20:1214-1223. [PMID: 19299168 DOI: 10.1016/j.jasms.2009.02.021] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/07/2008] [Revised: 02/10/2009] [Accepted: 02/10/2009] [Indexed: 05/27/2023]
21
Sweet SMM, Bailey CM, Cunningham DL, Heath JK, Cooper HJ. Large scale localization of protein phosphorylation by use of electron capture dissociation mass spectrometry. Mol Cell Proteomics 2009;8:904-12. [PMID: 19131326 PMCID: PMC2689766 DOI: 10.1074/mcp.m800451-mcp200] [Citation(s) in RCA: 78] [Impact Index Per Article: 5.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/26/2008] [Revised: 12/19/2008] [Indexed: 01/06/2023]  Open
22
Madsen JA, Brodbelt JS. Simplifying Fragmentation Patterns of Multiply Charged Peptides by N-Terminal Derivatization and Electron Transfer Collision Activated Dissociation. Anal Chem 2009;81:3645-53. [DOI: 10.1021/ac9000942] [Citation(s) in RCA: 42] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
23
Sweet SMM, Cooper HJ. On-line liquid chromatography electron capture dissociation for the characterization of phosphorylation sites in proteins. Methods Mol Biol 2009;527:191-x. [PMID: 19241014 DOI: 10.1007/978-1-60327-834-8_14] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/27/2023]
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