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Chisanga M, Masson JF. Machine Learning-Driven SERS Nanoendoscopy and Optophysiology. ANNUAL REVIEW OF ANALYTICAL CHEMISTRY (PALO ALTO, CALIF.) 2024; 17:313-338. [PMID: 38701442 DOI: 10.1146/annurev-anchem-061622-012448] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/05/2024]
Abstract
A frontier of analytical sciences is centered on the continuous measurement of molecules in or near cells, tissues, or organs, within the biological context in situ, where the molecular-level information is indicative of health status, therapeutic efficacy, and fundamental biochemical function of the host. Following the completion of the Human Genome Project, current research aims to link genes to functions of an organism and investigate how the environment modulates functional properties of organisms. New analytical methods have been developed to detect chemical changes with high spatial and temporal resolution, including minimally invasive surface-enhanced Raman scattering (SERS) nanofibers using the principles of endoscopy (SERS nanoendoscopy) or optical physiology (SERS optophysiology). Given the large spectral data sets generated from these experiments, SERS nanoendoscopy and optophysiology benefit from advances in data science and machine learning to extract chemical information from complex vibrational spectra measured by SERS. This review highlights new opportunities for intracellular, extracellular, and in vivo chemical measurements arising from the combination of SERS nanosensing and machine learning.
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Affiliation(s)
- Malama Chisanga
- Département de Chimie, Institut Courtois, Quebec Center for Advanced Materials, Regroupement Québécois sur les Matériaux de Pointe, and Centre Interdisciplinaire de Recherche sur le Cerveau et l'Apprentissage, Université de Montréal, Montréal, Québec, Canada;
| | - Jean-Francois Masson
- Département de Chimie, Institut Courtois, Quebec Center for Advanced Materials, Regroupement Québécois sur les Matériaux de Pointe, and Centre Interdisciplinaire de Recherche sur le Cerveau et l'Apprentissage, Université de Montréal, Montréal, Québec, Canada;
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Almeida MB, Galdiano CMR, Silva Benvenuto FSRD, Carrilho E, Brazaca LC. Strategies Employed to Design Biocompatible Metal Nanoparticles for Medical Science and Biotechnology Applications. ACS APPLIED MATERIALS & INTERFACES 2024. [PMID: 38688024 DOI: 10.1021/acsami.4c00838] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/02/2024]
Abstract
The applicability of nanomaterials has evolved in biomedical domains thanks to advances in biocompatibility strategies and the mitigation of cytotoxic effects, allowing diagnostics, imaging, and therapeutic approaches. The application of nanoparticles (NP), particularly metal nanoparticles (mNPs), such as gold (Au) and silver (Ag), includes inherent challenges related to the material characteristics, surface modification, and bioconjugation techniques. By tailoring the surface properties through appropriate coating with biocompatible molecules or functionalization with active biomolecules, researchers can reach a harmonious interaction with biological systems or samples (mostly fluids or tissues). Thus, this review highlights the mechanisms associated with the obtention of biocompatible mNP and presents a comprehensive overview of methods that facilitate safe and efficient production. Therefore, we consider this review to be a valuable resource for all researchers navigating this dynamic field.
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Affiliation(s)
- Mariana Bortholazzi Almeida
- Instituto de Química de São Carlos, Universidade de São Paulo, São Carlos, São Paulo 13566-590, Brazil
- Instituto Nacional de Ciência e Tecnologia de Bioanalítica-INCTBio, Campinas, São Paulo 13083-970, Brazil
| | | | - Filipe Sampaio Reis da Silva Benvenuto
- Instituto de Química de São Carlos, Universidade de São Paulo, São Carlos, São Paulo 13566-590, Brazil
- Instituto Nacional de Ciência e Tecnologia de Bioanalítica-INCTBio, Campinas, São Paulo 13083-970, Brazil
| | - Emanuel Carrilho
- Instituto de Química de São Carlos, Universidade de São Paulo, São Carlos, São Paulo 13566-590, Brazil
- Instituto Nacional de Ciência e Tecnologia de Bioanalítica-INCTBio, Campinas, São Paulo 13083-970, Brazil
| | - Laís Canniatti Brazaca
- Instituto de Química de São Carlos, Universidade de São Paulo, São Carlos, São Paulo 13566-590, Brazil
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Fortuni B, Ricci M, Vitale R, Inose T, Zhang Q, Hutchison JA, Hirai K, Fujita Y, Toyouchi S, Krzyzowska S, Van Zundert I, Rocha S, Uji-I H. SERS Endoscopy for Monitoring Intracellular Drug Dynamics. ACS Sens 2023; 8:2340-2347. [PMID: 37219991 DOI: 10.1021/acssensors.3c00394] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/25/2023]
Abstract
Understanding the dynamics and distribution of medicinal drugs in living cells is essential for the design and discovery of treatments. The tools available for revealing this information are, however, extremely limited. Here, we report the application of surface-enhanced Raman scattering (SERS) endoscopy, using plasmonic nanowires as SERS probes, to monitor the intracellular fate and dynamics of a common chemo-drug, doxorubicin, in A549 cancer cells. The unique spatio-temporal resolution of this technique reveals unprecedented information on the mode of action of doxorubicin: its localization in the nucleus, its complexation with medium components, and its intercalation with DNA as a function of time. Notably, we were able to discriminate these factors for the direct administration of doxorubicin or the use of a doxorubicin delivery system. The results reported here show that SERS endoscopy may have an important future role in medicinal chemistry for studying the dynamics and mechanism of action of drugs in cells.
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Affiliation(s)
- Beatrice Fortuni
- Molecular Imaging and Photonics, Department of Chemistry, KU Leuven, Celestijnenlaan 200F, 3001 Leuven, Belgium
| | - Monica Ricci
- Molecular Imaging and Photonics, Department of Chemistry, KU Leuven, Celestijnenlaan 200F, 3001 Leuven, Belgium
| | - Raffaele Vitale
- U. Lille, CNRS, LASIRE, Laboratoire Avancé de Spectroscopie pour les Interactions, la Réactivité et l'Environnement, Cité Scientifique, F-59000 Lille, France
| | - Tomoko Inose
- Institute for Integrated Cell-Material Science (WPI-iCeMS), Kyoto University, Yoshida, Sakyo-ku, Kyoto 606-8501, Japan
| | - Qiang Zhang
- Research Institute for Electronic Science, Hokkaido University, Sapporo 001-0020, Japan
| | - James Andell Hutchison
- ARC Centre of Excellence in Exciton Science, School of Chemistry, University of Melbourne, Parkville, VIC 3010, Australia
| | - Kenji Hirai
- Research Institute for Electronic Science, Hokkaido University, Sapporo 001-0020, Japan
| | - Yasuhiko Fujita
- Toray Research Center, Inc., Sonoyama 3-3-7, Otsu, Shiga 520-8567, Japan
| | - Shuichi Toyouchi
- Research Institute for Light-Induced Acceleration System (RILACS), Osaka Metropolitan University, 1-2 Gakuencho, Nakaku, Sakai, Osaka 599-8570, Japan
| | - Sandra Krzyzowska
- Molecular Imaging and Photonics, Department of Chemistry, KU Leuven, Celestijnenlaan 200F, 3001 Leuven, Belgium
| | - Indra Van Zundert
- Synthetic Biology Group, Department of Biomedical Engineering, Eindhoven University of Technology, P.O. Box 513, 5600 MB Eindhoven, The Netherlands
| | - Susana Rocha
- Molecular Imaging and Photonics, Department of Chemistry, KU Leuven, Celestijnenlaan 200F, 3001 Leuven, Belgium
| | - Hiroshi Uji-I
- Molecular Imaging and Photonics, Department of Chemistry, KU Leuven, Celestijnenlaan 200F, 3001 Leuven, Belgium
- Institute for Integrated Cell-Material Science (WPI-iCeMS), Kyoto University, Yoshida, Sakyo-ku, Kyoto 606-8501, Japan
- Research Institute for Electronic Science, Hokkaido University, Sapporo 001-0020, Japan
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Fang L, Pan XT, Liu K, Jiang D, Ye D, Ji LN, Wang K, Xia XH. Surface-Roughened SERS-Active Single Silver Nanowire for Simultaneous Detection of Intracellular and Extracellular pHs. ACS APPLIED MATERIALS & INTERFACES 2023; 15:20677-20685. [PMID: 37071781 DOI: 10.1021/acsami.3c00844] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/05/2023]
Abstract
The simultaneous and accurate detection of intracellular pH (pHi) and extracellular pH (pHe) is essential for studying the complex physiological activities of cancer cells and exploring pH-related therapeutic mechanisms. Here, we developed a super-long silver nanowire-based surface-enhanced Raman scattering (SERS) detection strategy for simultaneous sensing of pHi and pHe. A surface-roughened silver nanowire (AgNW) with a high aspect ratio is prepared at a nanoelectrode tip using a Cu-mediated oxidation process, which is then modified by pH-sensitive 4-mercaptobenzoic acid (4-MBA) to form 4-MBA@AgNW as a pH sensing probe. With the assistance of a 4D microcontroller, 4-MBA@AgNW is efficient in simultaneously detecting pHi and pHe in both 2D and 3D culture cancer cells by SERS, with minimal invasiveness, high sensitivity, and spatial resolution. Further investigation proves that the surface-roughened single AgNW can also be used in monitoring the dynamic variation of pHi and pHe of cancer cells upon stimulation with anticancer drugs or under a hypoxic environment.
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Affiliation(s)
- Leyi Fang
- State Key Laboratory of Analytical Chemistry for Life Science, School of Chemistry and Chemical Engineering, Nanjing University, Nanjing, Jiangsu 210023, China
| | - Xiao-Tong Pan
- State Key Laboratory of Analytical Chemistry for Life Science, School of Chemistry and Chemical Engineering, Nanjing University, Nanjing, Jiangsu 210023, China
| | - Kang Liu
- State Key Laboratory of Analytical Chemistry for Life Science, School of Chemistry and Chemical Engineering, Nanjing University, Nanjing, Jiangsu 210023, China
| | - Dechen Jiang
- State Key Laboratory of Analytical Chemistry for Life Science, School of Chemistry and Chemical Engineering, Nanjing University, Nanjing, Jiangsu 210023, China
| | - Deju Ye
- State Key Laboratory of Analytical Chemistry for Life Science, School of Chemistry and Chemical Engineering, Nanjing University, Nanjing, Jiangsu 210023, China
| | - Li-Na Ji
- State Key Laboratory of Pharmaceutical Biotechnology, School of Life Sciences, Nanjing University, Nanjing, Jiangsu 210023, China
| | - Kang Wang
- State Key Laboratory of Analytical Chemistry for Life Science, School of Chemistry and Chemical Engineering, Nanjing University, Nanjing, Jiangsu 210023, China
| | - Xing-Hua Xia
- State Key Laboratory of Analytical Chemistry for Life Science, School of Chemistry and Chemical Engineering, Nanjing University, Nanjing, Jiangsu 210023, China
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Zhu Y, Tang H, Wang H, Li Y. In Situ SERS Monitoring of the Plasmon-Driven Catalytic Reaction by Using Single Ag@Au Nanowires as Substrates. Anal Chem 2021; 93:11736-11744. [PMID: 34461733 DOI: 10.1021/acs.analchem.1c01926] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
Single nanowires (NWs), as a kind of new surface-enhanced Raman scattering (SERS) substrates, have received extensive concern owing to their distinctive properties and distinct advantages. In this contribution, single Ag nanowires (AgNWs) and single Au-coated AgNWs (Ag@AuNWs) were fabricated by the laser-assisted pulling method and the galvanic replacement reaction, respectively. The prepared single Ag@AuNWs show both high SERS activity and catalytic activity through in situ monitoring and assessing the plasmon-driven surface-catalytic reaction of 4-nitrothiophenol (4-NTP) dimerizing to 4,4'-dimercaptoazobenzene and the reduction reaction of 4-NTP to para-aminothiophenol, respectively. It was found that the intensity of the Raman peak was affected greatly by the laser power, and the Raman peak could still be observed at 0.05% power under mild conditions (633 nm wavelength) in this single nanowire system. From the Raman spectrum, the SERS enhancement factor (EF) of 5.4 × 104 can be obtained, and the EF value of 1.3 × 109 can be reached at optimal conditions. Results have shown that single Ag@AuNWs can be utilized as a good platform for SERS applications with high sensitivity, stability, and reproducibility, which will benefit SERS-based research at the single entity level.
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Affiliation(s)
- Yanyan Zhu
- Anhui Key Laboratory of Chemo/Biosensing, College of Chemistry and Materials Science, Anhui Normal University, Wuhu 241000, P.R. China
| | - Haoran Tang
- Anhui Key Laboratory of Chemo/Biosensing, College of Chemistry and Materials Science, Anhui Normal University, Wuhu 241000, P.R. China
| | - Hao Wang
- Anhui Key Laboratory of Chemo/Biosensing, College of Chemistry and Materials Science, Anhui Normal University, Wuhu 241000, P.R. China
| | - Yongxin Li
- Anhui Key Laboratory of Chemo/Biosensing, College of Chemistry and Materials Science, Anhui Normal University, Wuhu 241000, P.R. China
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Zhou Y, Wang Z, Peng Y, Wang F, Deng L. Gold Nanomaterials as a Promising Integrated Tool for Diagnosis and Treatment of Pathogenic Infections-A Review. J Biomed Nanotechnol 2021; 17:744-770. [PMID: 34082865 DOI: 10.1166/jbn.2021.3075] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
Abstract
This review summarizes research on functionalized gold nanomaterials as pathogen detection sensors and pathogen elimination integrated tools. After presenting the challenge of current severe threat from pathogenic bacteria and the increasingly serious growth rate of drug resistance, the first section mainly introduces the conspectus of gold nanostructures from synthesis, characterization, physicochemical properties and applications of gold nanomaterials. The next section deals with gold nanomaterials-based pathogen detection sensors such as colorimetric sensors, fluorescence sensors and Surface-Enhanced Raman Scattering sensors. We then discuss strategies based on gold nanomaterials for eliminating pathogenic infections, such as the dual sterilization strategy for grafting gold nanomaterials with antibacterial substances, photothermal antibacterial and photodynamic antibacterial methods. The fourth part briefly introduces the comprehensive strategy for diagnosis and sterilization of pathogen infection based on gold nanomaterials, such as the diagnosis and treatment strategy for pathogen infection using Roman signals real-time monitoring and photothermal sterilization. A concluding section that summarizes the current status and challenges of the novel diagnosis and treatment integrated strategy for pathogenic infections, gives an outlook on potential future perspectives.
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Affiliation(s)
- Yan Zhou
- Department of Microbiology, College of Life Science, Hunan Normal University, Changsha 410081, Hunan, China
| | - Zefeng Wang
- Department of Microbiology, College of Life Science, Hunan Normal University, Changsha 410081, Hunan, China
| | - Yanling Peng
- Department of Microbiology, College of Life Science, Hunan Normal University, Changsha 410081, Hunan, China
| | - Feiying Wang
- Department of Microbiology, College of Life Science, Hunan Normal University, Changsha 410081, Hunan, China
| | - Le Deng
- Department of Microbiology, College of Life Science, Hunan Normal University, Changsha 410081, Hunan, China
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