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Zhao Y, Hadavi D, Dijkgraaf I, Honing M. Coupling of surface plasmon resonance and mass spectrometry for molecular interaction studies in drug discovery. Drug Discov Today 2024; 29:104027. [PMID: 38762085 DOI: 10.1016/j.drudis.2024.104027] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/11/2024] [Revised: 05/01/2024] [Accepted: 05/13/2024] [Indexed: 05/20/2024]
Abstract
Various analytical technologies have been developed for the study of target-ligand interactions. The combination of these technologies gives pivotal information on the binding mechanism, kinetics, affinity, residence time, and changes in molecular structures. Mass spectrometry (MS) offers structural information, enabling the identification and quantification of target-ligand interactions. Surface plasmon resonance (SPR) provides kinetic information on target-ligand interaction in real time. The coupling of MS and SPR complements each other in the studies of target-ligand interactions. Over the last two decades, the capabilities and added values of SPR-MS have been reported. This review summarizes and highlights the benefits, applications, and potential for further research of the SPR-MS approach.
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Affiliation(s)
- Yuandi Zhao
- Maastricht Multimodal Molecular Imaging (M4i) Institute, Maastricht University, Maastricht, the Netherlands
| | - Darya Hadavi
- Maastricht Multimodal Molecular Imaging (M4i) Institute, Maastricht University, Maastricht, the Netherlands.
| | - Ingrid Dijkgraaf
- Department of Biochemistry, Cardiovascular Research Institute Maastricht (CARIM), Maastricht University, Maastricht, the Netherlands; Department of Radiology and Nuclear Medicine, MUMC+, The Netherlands
| | - Maarten Honing
- Maastricht Multimodal Molecular Imaging (M4i) Institute, Maastricht University, Maastricht, the Netherlands
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Wang Q, Ren ZH, Zhao WM, Wang L, Yan X, Zhu AS, Qiu FM, Zhang KK. Research advances on surface plasmon resonance biosensors. NANOSCALE 2022; 14:564-591. [PMID: 34940766 DOI: 10.1039/d1nr05400g] [Citation(s) in RCA: 35] [Impact Index Per Article: 17.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/20/2023]
Abstract
The surface plasmon resonance (SPR) phenomenon is of wide interest due to its sensitivity to changes in surface refractive index for the label-free, highly sensitive and rapid detection of biomarkers. This paper reviews research progress on SPR biosensors modified with different substrate structures and surface materials, surface plasmon resonance imaging (SPRI), and SPR-enhanced electrochemiluminescent (ECL) biosensors for applications in biosensing in the last five years. This paper focuses on the research on the application of the SPR phenomenon in the field of bio-detection, reviews the sensing characteristics of SPR biosensors with substrate structures of prisms, gratings, and optical fibers, and summarizes and analyzes the sensitivity and interference resistance of SPR sensors with surface modification of different materials (high-refractive index dielectric films, metallic micro- and nanostructures, and surface antifouling materials). Considering that imaging is an important tool for biomedical detection, this paper reviews the research progress on SPRI technology in the field of biomedical detection. In addition, this paper also reviews the research progress on SPR-enhanced ECL biosensors in the field of biosensing. Finally, this paper provides an outlook on the development trends of biosensing technology in terms of portable high-precision SPR sensors, reduction of self-loss of thin film materials, optimization of image processing techniques and simplification of electrode modification for ECL sensors.
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Affiliation(s)
- Qi Wang
- College of Information Science and Engineering, Northeastern University, Shenyang 110819, China.
- Hebei Key Laboratory of Micro-Nano Precision Optical Sensing and Measurement Technology, Qinhuangdao 066004, P. R. China
- State Key Laboratory of Synthetical Automation for Process Industries (Northeastern University), Shenyang 110819, P. R. China
- State Key Laboratory of Chemo/Biosensing and Chemometrics, Hunan University, Changsha 410082, P. R. China
| | - Zi-Han Ren
- College of Information Science and Engineering, Northeastern University, Shenyang 110819, China.
| | - Wan-Ming Zhao
- College of Information Science and Engineering, Northeastern University, Shenyang 110819, China.
| | - Lei Wang
- College of Information Science and Engineering, Northeastern University, Shenyang 110819, China.
| | - Xin Yan
- College of Information Science and Engineering, Northeastern University, Shenyang 110819, China.
| | - Ai-Song Zhu
- Basic Medical College, Zhejiang Chinese Medical University, Hangzhou 310053, P. R. China
| | - Feng-Mei Qiu
- Basic Medical College, Zhejiang Chinese Medical University, Hangzhou 310053, P. R. China
| | - Ke-Ke Zhang
- Institute of Oceanographic Instrumentation, Qilu University of Technology (Shandong Academy of Sciences), Qingdao 266061, P. R. China
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Abstract
The crystalline sponge (CS) method was developed as an X-ray crystallographic molecular structure analysis method that can be performed without the need for crystallization of the analyte. CS has strong molecular-recognition properties and a highly flexible framework. The amount of analyte can be reduced to a sub-milligram level. These features of the crystalline nano-space allow for determining the absolute structure of a trace analyte. In this review, we focus on the discovery of the CS method and its applications to biosynthetic products in combination with NMR spectroscopy. We also describe some examples of the CS method that are used mainly in combination with mass spectrometry (MS). Both approaches demonstrate the potential of microanalysis to determine the molecular structure of an unknown sample. Finally, we mention the use of a crystalline "nano-surface" rather than a crystalline nano-space in MS, which can detect small metabolites as well as post-translation biomolecules.
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Affiliation(s)
- Kazuaki Ohara
- Faculty of Pharmaceutical Sciences at Kagawa Campus, Tokushima Bunri University, 1314-1 Shido, Sanuki, Kagawa, 769-2193, Japan
| | - Kentaro Yamaguchi
- Faculty of Pharmaceutical Sciences at Kagawa Campus, Tokushima Bunri University, 1314-1 Shido, Sanuki, Kagawa, 769-2193, Japan
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Chida H, Tawa K. Microscopic Study on Excitation and Emission Enhancement by the Plasmon Mode on a Plasmonic Chip. SENSORS 2020; 20:s20226415. [PMID: 33182635 PMCID: PMC7697065 DOI: 10.3390/s20226415] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 09/25/2020] [Revised: 11/04/2020] [Accepted: 11/06/2020] [Indexed: 02/06/2023]
Abstract
Excitation and emission enhancement by using the plasmon mode formed on a plasmonic chip was studied with a microscope and micro-spectroscope. Surface plasmon resonance wavelengths were observed on one-dimensional (1D) and two-dimensional (2D) plasmonic chips by measuring reflection and transmission spectra, and they were assigned to the plasmon modes predicted by the theoretical resonance wavelengths. The excitation and emission enhancements were evaluated using the fluorescence intensity of yellow–green fluorescence particles. The 2D grating had plasmon modes of kgx45(2) (diagonal direction with m = 2) in addition to the fundamental mode of kgx(1) (direction of a square one side) in the visible range. In epifluorescence detection, the excitation enhancement factors of kgx(2) on the 1D and 2D chips were found to be 1.3–1.4, and the emission enhancement factor of kgx45(2) on the 2D chip was 1.5–1.8, although the emission enhancement was not found on the 1D chip. Moreover, enhancement factors for the other fluorophores were also studied. The emission enhancement factor of kgx(1) was shown to depend on the fluorescence quantum yield. The emission enhancement of 2D was 1.3-fold larger than that of 1D considering all azimuth components, and the 2D pattern was shown to be advantageous for bright fluorescence microscopic observation.
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Nair S, Gomez-Cruz J, Manjarrez-Hernandez Á, Ascanio G, Sabat RG, Escobedo C. Rapid label-free detection of intact pathogenic bacteria in situ via surface plasmon resonance imaging enabled by crossed surface relief gratings. Analyst 2020; 145:2133-2142. [PMID: 32076690 DOI: 10.1039/c9an02339a] [Citation(s) in RCA: 17] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]
Abstract
The unique plasmonic energy exchange occurring within metallic crossed surface relief gratings (CSRGs) has recently motivated their use as biosensors. However, CSRG-based biosensing has been limited to spectroscopic techniques, failing to harness their potential for integration with ubiquitous portable electronics. Here, we introduce biosensing via surface plasmon resonance imaging (SPRi) enabled by CSRGs. The SPRi platform is fully integrated including optics and electronics, has bulk sensitivity of 613 Pixel Intensity Unit (PIU)/Refractive Index Unit (RIU), a resolution of 10-6 RIU and a signal-to-noise ratio of ∼33 dB. Finite-Difference Time-Domain (FDTD) simulations confirm that CSRG-enabled SPRi is supported by an electric field intensity enhancement of ∼30 times, due to plasmon resonance at the metal-dielectric interface. In the context of real-world biosensing applications, we demonstrate the rapid (<35 min) and label-free detection of uropathogenic E. coli (UPEC) in PBS and human urine samples for concentrations ranging from 103 to 109 CFU mL-1. The detection limit of the platform is ∼100 CFU mL-1, three orders of magnitude lower than the clinical detection limit for diagnosis of urinary tract infection. This work presents a new avenue for CSRGs as SPRi-based biosensing platforms and their great potential for integration with portable electronics for applications requiring in situ detection.
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Affiliation(s)
- Srijit Nair
- Department of Chemical Engineering, Queen's University, K7L 3N6, Kingston, ON, Canada.
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Hayashi Y, Ohara K, Taki R, Saeki T, Yamaguchi K. Crystalline sponge-laser desorption ionization (CS-LDI) of unsaturated cyclic organic compounds encapsulated in different electronic environments in pores. Anal Chim Acta 2019; 1064:80-86. [PMID: 30982521 DOI: 10.1016/j.aca.2019.03.011] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/01/2018] [Revised: 03/02/2019] [Accepted: 03/07/2019] [Indexed: 01/06/2023]
Abstract
We have developed laser desorption ionization mass spectrometry (LDI-MS) of organic molecules encapsulated in a crystalline sponge (CS). Cyclic organic compounds 1,2,3,4,5-pentamethylcyclopentadiene, zerumbone, and muscone were encapsulated in CS as guest regardless of guest crystallization. Single-crystal X-ray analysis closely scrutinized the position of the guest in the pore and the interaction between the guest and the CS framework. After single-crystal X-ray analysis, the same single crystal was subjected to LDI-MS. Ionization efficiency differed markedly depending on whether π-π interaction existed or not. It is obvious that π-π interaction is the key to transferring laser energy from the CS framework to the guest for the ionization of molecule encapsulated in CS. The results suggest the importance of controlling the positions of analyte and matrix as well as noncovalent interactions, such as hydrogen bonding interaction, electrostatic interaction, and so on.
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Affiliation(s)
- Yukako Hayashi
- Faculty of Pharmaceutical Sciences at Kagawa Campus, Tokushima Bunri University, 1314-1 Shido, Sanuki, Kagawa, 769-2193, Japan
| | - Kazuaki Ohara
- Faculty of Pharmaceutical Sciences at Kagawa Campus, Tokushima Bunri University, 1314-1 Shido, Sanuki, Kagawa, 769-2193, Japan.
| | - Rika Taki
- Faculty of Pharmaceutical Sciences at Kagawa Campus, Tokushima Bunri University, 1314-1 Shido, Sanuki, Kagawa, 769-2193, Japan
| | - Tomomi Saeki
- Faculty of Pharmaceutical Sciences at Kagawa Campus, Tokushima Bunri University, 1314-1 Shido, Sanuki, Kagawa, 769-2193, Japan
| | - Kentaro Yamaguchi
- Faculty of Pharmaceutical Sciences at Kagawa Campus, Tokushima Bunri University, 1314-1 Shido, Sanuki, Kagawa, 769-2193, Japan.
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Hinman SS, McKeating KS, Cheng Q. Surface Plasmon Resonance: Material and Interface Design for Universal Accessibility. Anal Chem 2018; 90:19-39. [PMID: 29053253 PMCID: PMC6041476 DOI: 10.1021/acs.analchem.7b04251] [Citation(s) in RCA: 64] [Impact Index Per Article: 10.7] [Reference Citation Analysis] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/16/2022]
Affiliation(s)
- Samuel S. Hinman
- Environmental Toxicology, University of California–Riverside, Riverside, California 92521, United States
| | - Kristy S. McKeating
- Department of Chemistry, University of California–Riverside, Riverside, California 92521, United States
| | - Quan Cheng
- Environmental Toxicology, University of California–Riverside, Riverside, California 92521, United States
- Department of Chemistry, University of California–Riverside, Riverside, California 92521, United States
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Wang H, Wang Y, Wang G, Hong L. Matrix-assisted laser-desorption/ionization mass spectrometric imaging of olanzapine in a single hair using esculetin as a matrix. J Pharm Biomed Anal 2017; 141:123-131. [DOI: 10.1016/j.jpba.2017.04.015] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/01/2017] [Revised: 04/04/2017] [Accepted: 04/14/2017] [Indexed: 12/11/2022]
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Wang H, Wang Y. Matrix-assisted laser desorption/ionization mass spectrometric imaging for the rapid segmental analysis of methamphetamine in a single hair using umbelliferone as a matrix. Anal Chim Acta 2017; 975:42-51. [PMID: 28552305 DOI: 10.1016/j.aca.2017.04.012] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/14/2017] [Revised: 03/25/2017] [Accepted: 04/02/2017] [Indexed: 12/11/2022]
Abstract
Segmental hair analysis offers a longer period for retrospective drug detection than blood or urine. Hair is a keratinous fiber and is strongly hydrophobic. The embedding of drugs in hydrophobic hair at low concentrations makes it difficult for extraction and detection with matrix-assisted laser desorption/ionization (MALDI) coupled with mass spectrometric imaging (MSI). In this study, a single scalp hair was longitudinally cut with a cryostat section to a length of 4 mm and fixed onto a stainless steel MALDI plate. Umbelliferone was used as a new hydrophobic matrix to enrich and assist the ionization efficiency of methamphetamine in the hair sample. MALDI-Fourier transform ion cyclotron resonance (FTICR)-MS profiling and imaging were performed for direct detection and mapping of methamphetamine on the longitudinal sections of the single hair sample in positive ion mode. Using MALDI-MSI, the distribution of methamphetamine was observed throughout five longitudinally sectioned hair samples from a drug abuser. The changes of methamphetamine were also semi-quantified by comparing the ratios of methamphetamine/internal standard (I.S). This method improves the detection sensitivity of target drugs embedded in a hair matrix for imaging with mass spectrometry. The method could provide a detection level of methamphetamine down to a nanogram per milligram incorporated into hair. The results were also compared with the conventional high performance liquid chromatography -tandem mass spectrometry (HPLC-MS/MS) method. Changes in the imaging results over time by the MSI method showed good semi-quantitative correlation to the results from the HPLC-MS/MS method. This study provides a powerful tool for drug abuse control and forensic medicine analysis in a narrow time frame, and a reduction in the sample amount required.
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Affiliation(s)
- Hang Wang
- Department of Forensic Toxicology, Institute of Forensic Sciences, Ministry of Justice, Shanghai Key Laboratory of Forensic Medicine, Shanghai, 200063, PR China; Instrumental Analysis Center, Shanghai Jiao Tong University, Dongchuan Road 800, Shanghai, 200240, PR China.
| | - Ying Wang
- Narcotics Control Commission, Nanjing Municipal Public Security Bureau, Nanjing, 210012, PR China
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Pharmacokinetic study based on a matrix-assisted laser desorption/ionization quadrupole ion trap time-of-flight imaging mass microscope combined with a novel relative exposure approach: A case of octreotide in mouse target tissues. Anal Chim Acta 2017; 952:71-80. [DOI: 10.1016/j.aca.2016.11.056] [Citation(s) in RCA: 15] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/31/2016] [Revised: 11/03/2016] [Accepted: 11/24/2016] [Indexed: 12/17/2022]
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Anders U, Schaefer JV, Hibti FE, Frydman C, Suckau D, Plückthun A, Zenobi R. SPRi-MALDI MS: characterization and identification of a kinase from cell lysate by specific interaction with different designed ankyrin repeat proteins. Anal Bioanal Chem 2016; 409:1827-1836. [DOI: 10.1007/s00216-016-0127-3] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/28/2016] [Revised: 11/22/2016] [Accepted: 11/29/2016] [Indexed: 01/24/2023]
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Přichystal J, Schug KA, Lemr K, Novák J, Havlíček V. Structural Analysis of Natural Products. Anal Chem 2016; 88:10338-10346. [PMID: 27661090 DOI: 10.1021/acs.analchem.6b02386] [Citation(s) in RCA: 35] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/08/2023]
Abstract
Current mass spectrometry, nuclear magnetic resonance spectroscopy, and X-ray diffraction are presented as structure elucidation tools for analytical chemistry of natural products. Discovering new molecular entities combined with dereplication of known organic compounds represent prerequisites for biological assays and for respective applications as pharmaceuticals or molecular markers. Liquid chromatography is briefly addressed with respect to its use in mass spectrometry- and nuclear magnetic resonance-based metabolomics studies.
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Affiliation(s)
- Jakub Přichystal
- Institute of Microbiology, Academy of Sciences of the Czech Republic , Videnska 1083, Prague 4, Czech Republic.,Regional Centre of Advanced Technologies and Materials, Department of Analytical Chemistry, Palacky University , 17. listopadu 12, 77146 Olomouc, Czech Republic
| | - Kevin A Schug
- The University of Texas at Arlington , Department of Chemistry and Biochemistry, Arlington, Texas 76019-0065, United States
| | - Karel Lemr
- Institute of Microbiology, Academy of Sciences of the Czech Republic , Videnska 1083, Prague 4, Czech Republic.,Regional Centre of Advanced Technologies and Materials, Department of Analytical Chemistry, Palacky University , 17. listopadu 12, 77146 Olomouc, Czech Republic
| | - Jiří Novák
- Institute of Microbiology, Academy of Sciences of the Czech Republic , Videnska 1083, Prague 4, Czech Republic
| | - Vladimír Havlíček
- Institute of Microbiology, Academy of Sciences of the Czech Republic , Videnska 1083, Prague 4, Czech Republic.,Regional Centre of Advanced Technologies and Materials, Department of Analytical Chemistry, Palacky University , 17. listopadu 12, 77146 Olomouc, Czech Republic
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