Solid-Supported Porphyrins Useful for the Synthesis of Conjugates with Oligomeric Biomolecules

Access to 1'-Amino Carbocyclic Phosphoramidite to Enable Postsynthetic Functionalization of Oligonucleotides

We report a synthesis of a carbocyclic, abasic RNA phosphoramidite decorated with an amino functionality. The building block was efficiently incorporated into an RNA oligonucleotide in a site-specific manner, followed by deprotection to a free amino group. The amino moiety could be further derivatized as exemplified with fluorescein N-hydroxysuccinimide ester. Hence, this convertible building block may provide access to a variety of RNA oligonucleotides via postsynthetic amino group functionalization. In particular, providing a vector toward nucleobase replacements.

Synthesis of Porphyrin and Bacteriochlorin Glycoconjugates through CuAAC Reaction Tuning

Rapid and reproducible access to a series of unique porphyrin and bacteriochlorin glycoconjugates, including meso-glycosylated porphyrins and bacteriochlorins, and beta-glycosylated porphyrins, via copper catalyzed azide-alkyne 1,3-dipolar cycloaddition (CuAAC) is reported for the first time. The work presented highlights the system-dependent reaction conditions required for glycosylation to porphyrins and bacteriochlorins based on the unique electronic properties of each ring system. Attenuated reaction conditions were used to synthesize fifteen new glycosylated porphyrin and bacteriochlorin analogs in 74 - 99% yield, and were extended to solid support to produce the first oligo(amidoamine)-based porphyrin glycoconjugate. These compounds hold significant potential as next generation water soluble catalysts and photodynamic therapy/photodynamic inactivation (PDT/PDI) agents.

Novel radiochromic porphyrin-based film dosimeters for γ ray dosimetry: investigation on metal and ligand effects

As the utilizing of porphyrins and metalloporphyrins in high dose dosimetry becomes more prevalent, research on structural effects of these molecules on dosimetric characteristics and physicochemical properties of their film dosimeters becomes more and more essential. The present study emphasizes dosimetry (measuring radiolytic bleaching of two novel film dosimeters with spectrophotometric methods against 60Co γ-rays exposure in dose range of 0–100 kGy) and evaluating substituent effects on the radiation response of the film dosimeters (role of organic groups and changing the metal core of porphyrins). With casting of solutions of polycarbonate (PC) containing 0.5 wt.% 5,10,15,20-Tetrakis(2,4,6-trimethoxyphenyl) porphyrin (TTMPP) and 5,10,15,20-Tetraphenyl-21H,23H-porphine manganese (III) chloride (Mn-TPP), two novel radiochromic films with the thickness of 20 μm were fabricated. The presence of porphyrin fragments has been observed in the UV–Vis spectra after γ radiation. Due to the changes of the metal core and substituents of the dye ring, meaningful shifts of maximum absorbance of Soret bands of porphyrins and different radiation response of film-dosimeters were observed. The results were compared with the other polycarbonate/porphyrin film dosimeters. The results indicate that the radiation-induced decoloration of PC/Porphyrin films can be reliably tuned and used in high dose dosimetry.

Dosimetric characterization of novel polycarbonate/porphyrin film dosimeters for high dose dosimetry: study on complexation effect

Two novel radiochromic films with 20 μm thickness were made from casting of solutions of polycarbonate (PC) containing 0.5 wt.% tetra phenyl porphyrin (TPPH2) and 5,10,15,20-tetraphenyl-21H,23H-porphine iron(III) chloride (Fe-TPP). Dosimetric characterization of the films as routine dosimeters were studied by spectrophotometric method. On subjecting TPPH2/PC and Fe-TPP/PC film dosimeters to gamma radiation, radiolytic bleaching of films was observed. The effects of metal-complexation on the radiation response of the film dosimeters were studied under 60Co γ-rays exposure in dose range of 0–100 kGy. The results were also compared with the PC/TPPF20 (PC/tetrakis (pentafluorophenyl) porphyrin) dosimeter to evaluate the substituent effect (role of fluorine groups). Experimental parameters including humidity, temperature and pre-irradiation (shelf-life) and post-irradiation storage in dark and in indirect sunlight were examined. The maximum absorbance of Soret band of dyes had meaningful shifts and reduction which arose from complexation and substituents. The dyed films characteristics were found to be stable enough in media with high degrees of temperature and humidity. The results indicate that the radiation-induced decoloration of TPPH2/PC and Fe-TPP/PC films can be reliably tuned and used in high dose dosimetry.

Synthesis of Azide-Modified Chondroitin Sulfate Precursors: Substrates for "Click"- Conjugation with Fluorescent Labels and Oligonucleotides

Azidopropyl-modified precursors of chondroitin sulfate (CS) tetrasaccharides have been synthesized, which, after facile conversion to final CS structures, may be conjugated with alkyne-modified target compounds by a one-pot “click”-ligation. RP HPLC was used for the monitoring of the key reaction steps (protecting group manipulation and sulfation) and purification of the CS precursors (as partially protected form, bearing the O-Lev, O-benzoyl, and N-trichloroacetyl groups and methyl esters). Subsequent treatments with aqueous NaOH, concentrated ammonia, and acetic anhydride (i.e., global deprotection and acetylation of the galactosamine units) converted the precursors to final CS structures. The azidopropyl group was exposed to a strain-promoted azide–alkyne cycloaddition (SPAAC) with a dibenzylcyclooctyne-modified carboxyrhodamine dye to give labeled CSs. Conjugation with a 5′-cyclooctyne-modified oligonucleotide was additionally carried out to show the applicability of the precursors for the synthesis of biomolecular hybrids.