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Ratre P, Jain B, Kumari R, Thareja S, Tiwari R, Srivastava RK, Goryacheva IY, Mishra PK. Bioanalytical Applications of Graphene Quantum Dots for Circulating Cell-Free Nucleic Acids: A Review. ACS OMEGA 2022; 7:39586-39602. [PMID: 36385871 PMCID: PMC9648045 DOI: 10.1021/acsomega.2c05414] [Citation(s) in RCA: 10] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/23/2022] [Accepted: 10/06/2022] [Indexed: 05/09/2023]
Abstract
Graphene quantum dots (GQDs) are carbonaceous nanodots that are natural crystalline semiconductors and range from 1 to 20 nm. The broad range of applications for GQDs is based on their unique physical and chemical properties. Compared to inorganic quantum dots, GQDs possess numerous advantages, including formidable biocompatibility, low intrinsic toxicity, excellent dispensability, hydrophilicity, and surface grating, thus making them promising materials for nanophotonic applications. Owing to their unique photonic compliant properties, such as superb solubility, robust chemical inertness, large specific surface area, superabundant surface conjugation sites, superior photostability, resistance to photobleaching, and nonblinking, GQDs have emerged as a novel class of probes for the detection of biomolecules and study of their molecular interactions. Here, we present a brief overview of GQDs, their advantages over quantum dots (QDs), various synthesis procedures, and different surface conjugation chemistries for detecting cell-free circulating nucleic acids (CNAs). With the prominent rise of liquid biopsy-based approaches for real-time detection of CNAs, GQDs-based strategies might be a step toward early diagnosis, prognosis, treatment monitoring, and outcome prediction of various non-communicable diseases, including cancers.
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Affiliation(s)
- Pooja Ratre
- Department
of Molecular Biology, ICMR-National Institute
for Research in Environmental Health, Bhopal, 462030, India
| | - Bulbul Jain
- Department
of Molecular Biology, ICMR-National Institute
for Research in Environmental Health, Bhopal, 462030, India
| | - Roshani Kumari
- Department
of Molecular Biology, ICMR-National Institute
for Research in Environmental Health, Bhopal, 462030, India
| | - Suresh Thareja
- Department
of Pharmaceutical Sciences and Natural Products, Central University of Punjab, Bathinda, 151401, India
| | - Rajnarayan Tiwari
- Department
of Molecular Biology, ICMR-National Institute
for Research in Environmental Health, Bhopal, 462030, India
| | - Rupesh Kumar Srivastava
- Department
of Biotechnology, All India Institute of
Medical Sciences, New Delhi, 110029, India
| | - Irina Yu Goryacheva
- Department
of General and Inorganic Chemistry, Institute
of Chemistry, Saratov State University, Saratov, 410012, Russia
| | - Pradyumna Kumar Mishra
- Department
of Molecular Biology, ICMR-National Institute
for Research in Environmental Health, Bhopal, 462030, India
- E-mail: . Mobile: +91 94799 83943
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Das R, Mukhopadhyay B. A brief insight to the role of glyconanotechnology in modern day diagnostics and therapeutics. Carbohydr Res 2021; 507:108394. [PMID: 34265516 DOI: 10.1016/j.carres.2021.108394] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/16/2021] [Revised: 06/28/2021] [Accepted: 06/30/2021] [Indexed: 12/17/2022]
Abstract
Carbohydrate-protein and carbohydrate-carbohydrate interactions are very important for various biological processes. Although the magnitude of these interactions is low compared to that of protein-protein interaction, the magnitude can be boosted by multivalent approach known as glycocluster effect. Nanoparticle platform is one of the best ways to present diverse glycoforms in multivalent manner and thus, the field of glyconanotechnology has emerged as an important field of research considering their potential applications in diagnostics and therapeutics. Considerable advances in the field have been achieved through development of novel techniques, use of diverse metallic and non-metallic cores for better efficacy and application of ever-increasing number of carbohydrate ligands for site-specific interaction. The present review encompasses the recent developments in the area of glyconanotechnology and their future promise as diagnostic and therapeutic tools.
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Affiliation(s)
- Rituparna Das
- Sweet Lab, Department of Chemical Sciences, Indian Institute of Science Education and Research Kolkata, Mohanpur, Nadia, 741246, India.
| | - Balaram Mukhopadhyay
- Sweet Lab, Department of Chemical Sciences, Indian Institute of Science Education and Research Kolkata, Mohanpur, Nadia, 741246, India.
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Kveton F, Blsakova A, Kasak P, Tkac J. Glycan Nanobiosensors. NANOMATERIALS (BASEL, SWITZERLAND) 2020; 10:E1406. [PMID: 32707669 PMCID: PMC7408262 DOI: 10.3390/nano10071406] [Citation(s) in RCA: 13] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 06/19/2020] [Revised: 07/14/2020] [Accepted: 07/15/2020] [Indexed: 12/26/2022]
Abstract
This review paper comprehensively summarizes advances made in the design of glycan nanobiosensors using diverse forms of nanomaterials. In particular, the paper covers the application of gold nanoparticles, quantum dots, magnetic nanoparticles, carbon nanoparticles, hybrid types of nanoparticles, proteins as nanoscaffolds and various nanoscale-based approaches to designing such nanoscale probes. The article covers innovative immobilization strategies for the conjugation of glycans on nanoparticles. Summaries of the detection schemes applied, the analytes detected and the key operational characteristics of such nanobiosensors are provided in the form of tables for each particular type of nanomaterial.
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Affiliation(s)
- Filip Kveton
- Institute of Chemistry, Slovak Academy of Sciences, Dubravska cesta 9, 845 38 Bratislava, Slovakia; (F.K.); (A.B.)
| | - Anna Blsakova
- Institute of Chemistry, Slovak Academy of Sciences, Dubravska cesta 9, 845 38 Bratislava, Slovakia; (F.K.); (A.B.)
| | - Peter Kasak
- Center for Advanced Materials, Qatar University, Doha 2713, Qatar
| | - Jan Tkac
- Institute of Chemistry, Slovak Academy of Sciences, Dubravska cesta 9, 845 38 Bratislava, Slovakia; (F.K.); (A.B.)
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Cervantes-Jiménez R, Sánchez-Segura L, Estrada-Martínez LE, Topete-Camacho A, Mendiola-Olaya E, Rosas-Escareño AN, Saldaña-Gutiérrez C, Figueroa-Cabañas ME, Dena-Beltrán JL, Kuri-García A, Blanco-Labra A, García-Gasca T. Quantum Dot Labelling of Tepary Bean ( Phaseolus acutifolius) Lectins by Microfluidics. Molecules 2020; 25:E1041. [PMID: 32110921 PMCID: PMC7179211 DOI: 10.3390/molecules25051041] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/30/2019] [Revised: 02/03/2020] [Accepted: 02/13/2020] [Indexed: 11/16/2022] Open
Abstract
Lectins are bioactive proteins with the ability to recognize cell membrane carbohydrates in a specific way. Diverse plant lectins have shown diagnostic and therapeutic potential against cancer, and their cytotoxicity against transformed cells is mediated through the induction of apoptosis. Previous works have determined the cytotoxic activity of a Tepary bean (Phaseolus acutifolius) lectin fraction (TBLF) and its anti-tumorigenic effect on colon cancer. In this work, lectins from the TBLF were additionally purified by ionic-exchange chromatography. Two peaks with agglutination activity were obtained: one of them was named TBL-IE2 and showed a single protein band in two-dimensional electrophoresis; this one was thus selected for coupling to quantum dot (QD) nanoparticles by microfluidics (TBL-IE2-QD). The microfluidic method led to low sample usage, and resulted in homogeneous complexes, whose visualization was achieved using multiphoton and transmission electron microscopy. The average particle size (380 nm) and the average zeta potential (-18.51 mV) were determined. The cytotoxicity of the TBL-IE2 and TBL-IE2-QD was assayed on HT-29 colon cancer cells, showing no differences between them (p ≤ 0.05), where the LC50 values were 1.0 × 10-3 and 1.7 × 10-3 mg/mL, respectively. The microfluidic technique allowed control of the coupling between the QD and the protein, substantially improving the labelling process, providing a rapid and efficient method that enabled the traceability of lectins. Future studies will focus on the potential use of the QD-labelled lectin to recognize tumor tissues.
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Affiliation(s)
- Ricardo Cervantes-Jiménez
- Facultad de Ciencias Naturales, Universidad Autónoma de Querétaro, Av. de las Ciencias s/n, Juriquilla, Querétaro CP 76230, Mexico; (R.C.-J.); (L.E.E.-M.); (C.S.-G.); (M.E.F.-C.); (J.L.D.-B.); (A.K.-G.)
| | - Lino Sánchez-Segura
- Departamento de Ingeniería Genética, Centro de Investigación y de Estudios Avanzados del Instituto Politécnico Nacional, Unidad Irapuato, Guanajuato CP 36821, Mexico;
| | - Laura Elena Estrada-Martínez
- Facultad de Ciencias Naturales, Universidad Autónoma de Querétaro, Av. de las Ciencias s/n, Juriquilla, Querétaro CP 76230, Mexico; (R.C.-J.); (L.E.E.-M.); (C.S.-G.); (M.E.F.-C.); (J.L.D.-B.); (A.K.-G.)
| | - Antonio Topete-Camacho
- Departamento de Fisiología, Centro de Ciencias de la Salud, Universidad de Guadalajara, Guadalajara CP 44340, Mexico; (A.T.-C.); (A.N.R.-E.)
| | - Elizabeth Mendiola-Olaya
- Departamento de Biotecnología y Bioquímica, Centro de Investigación y de Estudios Avanzados del Instituto Politécnico Nacional, Unidad Irapuato, Guanajuato CP 36821, Mexico;
| | - Abraham Noé Rosas-Escareño
- Departamento de Fisiología, Centro de Ciencias de la Salud, Universidad de Guadalajara, Guadalajara CP 44340, Mexico; (A.T.-C.); (A.N.R.-E.)
| | - Carlos Saldaña-Gutiérrez
- Facultad de Ciencias Naturales, Universidad Autónoma de Querétaro, Av. de las Ciencias s/n, Juriquilla, Querétaro CP 76230, Mexico; (R.C.-J.); (L.E.E.-M.); (C.S.-G.); (M.E.F.-C.); (J.L.D.-B.); (A.K.-G.)
| | - Mónica Eugenia Figueroa-Cabañas
- Facultad de Ciencias Naturales, Universidad Autónoma de Querétaro, Av. de las Ciencias s/n, Juriquilla, Querétaro CP 76230, Mexico; (R.C.-J.); (L.E.E.-M.); (C.S.-G.); (M.E.F.-C.); (J.L.D.-B.); (A.K.-G.)
| | - José Luis Dena-Beltrán
- Facultad de Ciencias Naturales, Universidad Autónoma de Querétaro, Av. de las Ciencias s/n, Juriquilla, Querétaro CP 76230, Mexico; (R.C.-J.); (L.E.E.-M.); (C.S.-G.); (M.E.F.-C.); (J.L.D.-B.); (A.K.-G.)
| | - Aarón Kuri-García
- Facultad de Ciencias Naturales, Universidad Autónoma de Querétaro, Av. de las Ciencias s/n, Juriquilla, Querétaro CP 76230, Mexico; (R.C.-J.); (L.E.E.-M.); (C.S.-G.); (M.E.F.-C.); (J.L.D.-B.); (A.K.-G.)
| | - Alejandro Blanco-Labra
- Departamento de Biotecnología y Bioquímica, Centro de Investigación y de Estudios Avanzados del Instituto Politécnico Nacional, Unidad Irapuato, Guanajuato CP 36821, Mexico;
| | - Teresa García-Gasca
- Facultad de Ciencias Naturales, Universidad Autónoma de Querétaro, Av. de las Ciencias s/n, Juriquilla, Querétaro CP 76230, Mexico; (R.C.-J.); (L.E.E.-M.); (C.S.-G.); (M.E.F.-C.); (J.L.D.-B.); (A.K.-G.)
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