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Structure and spectroscopy of methionyl-methionine for aquaculture. Sci Rep 2021; 11:458. [PMID: 33432094 PMCID: PMC7801548 DOI: 10.1038/s41598-020-80385-z] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/05/2020] [Accepted: 12/21/2020] [Indexed: 11/09/2022] Open
Abstract
The amino acid L-methionine is an essential amino acid and is commonly used as a feed supplement in terrestrial animals. It is less suitable for marine organisms because it is readily excreted. It is also highly water soluble and this results in loss of the feed and eutrophication of the water. To address these problems, the dipeptide DL-methionyl-DL-methionine (trade name: AQUAVI Met-Met) has been developed as a dedicated methionine source for aquaculture. The commercial product is a mixture of a racemic crystal form of D-methionyl-D-methionine/L-methionyl-L-methionine and a racemic crystal form of D-methionyl-L-methionine/L-methionyl-D-methionine. In this work, we have computationally, structurally, spectroscopically and by electron microscopy characterised these materials. The microscopy and spectroscopy demonstrate that there is no interaction between the DD-LL and DL-LD racemates on any length scale from the macroscopic to the nanoscale.
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Parker SF, Cavaye H, Callear SK. Structure and Dynamics of the Superprotonic Conductor Caesium Hydrogen Sulfate, CsHSO 4. Molecules 2020; 25:molecules25061271. [PMID: 32168860 PMCID: PMC7143950 DOI: 10.3390/molecules25061271] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/10/2020] [Revised: 03/06/2020] [Accepted: 03/07/2020] [Indexed: 12/03/2022] Open
Abstract
We have investigated caesium hydrogen sulfate, CsHSO4, in all three of its ambient pressure phases by total scattering neutron diffraction, inelastic neutron scattering (INS) and Raman spectroscopies and periodic density functional theory calculations. Above 140 °C, CsHSO4 undergoes a phase transition to a superprotonic conductor that has potential application in intermediate temperature fuel cells. Total scattering neutron diffraction data clearly show that all the existing structures of this phase are unable to describe the local structure, because they have either partial occupancies of the atoms and/or non-physical O–H distances. Knowledge of the local structure is crucial because it is this that determines the conduction mechanism. Starting from one of the previous models, we have generated a new structure that has no partial occupancies and reasonable O–H distances. After geometry optimisation, the calculated radial distribution function is in reasonable agreement with the experimental data, as are the calculated and observed INS and Raman spectra. This work is particularly notable in that we have measured INS spectra in the O–H stretch region above room temperature, which is extremely rare. The INS spectra have the enormous advantage that the electrical anharmonicity that complicates the infrared spectra is absent and the stretch modes are plainly seen.
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Zachariou A, Hawkins AP, Collier P, Howe RF, Lennon D, Parker SF. The Methyl Torsion in Unsaturated Compounds. ACS OMEGA 2020; 5:2755-2765. [PMID: 32095699 PMCID: PMC7033956 DOI: 10.1021/acsomega.9b03351] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/09/2019] [Accepted: 01/24/2020] [Indexed: 05/11/2023]
Abstract
How the methyl torsion transition energy in unsaturated systems is affected by its environment is investigated. It is strongly influenced by both its immediate neighborhood, (the number of methyl groups present in the molecule) and the intermolecular interactions. It is clear that the intermolecular interactions have a major influence on the torsion transition energy, as demonstrated unambiguously previously for mesitylene and also seen here for other systems. In part, this may be caused by the fact that the methyl torsion is rarely a pure mode (unless enforced by symmetry). Where the crystal structure is available, the assignments have been supported by CASTEP calculations of the unit cell. The agreement between the observed and calculated spectra is generally good, although not perfect, toluene being a case in point, and highlights just how demanding it is to obtain accurate transition energies for low energy modes. The disagreement between observed and calculated inelastic neutron scattering spectra for meta-xylene and 9,10 dimethylanthracene is so severe that it would suggest that there are additional phases to those presently known. Comparison between the full periodic calculations and those for the isolated molecule shows that intermolecular interactions raise the methyl torsion transition energy by at least 8% and in some cases by more than 50%. The presence of more than one methyl group in the molecule generally raises the average torsion energy from the <100 cm-1 seen for single methyl groups to 150-200 cm-1.
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Affiliation(s)
- Andrea Zachariou
- School
of Chemistry, University of Glasgow, Joseph Black Building, Glasgow G12 8QQ, U.K.
- UK
Catalysis Hub, Research Complex at Harwell, STFC Rutherford Appleton Laboratory,
Chilton, Oxon OX11 0FA, U.K.
| | - Alexander P. Hawkins
- School
of Chemistry, University of Glasgow, Joseph Black Building, Glasgow G12 8QQ, U.K.
- UK
Catalysis Hub, Research Complex at Harwell, STFC Rutherford Appleton Laboratory,
Chilton, Oxon OX11 0FA, U.K.
| | - Paul Collier
- Johnson
Matthey Technology Centre, Blounts Court, Sonning Common, Reading RG4 9NH, U.K.
| | - Russell F. Howe
- Department
of Chemistry, University of Aberdeen, Aberdeen AB24 3UE, U.K.
| | - David Lennon
- School
of Chemistry, University of Glasgow, Joseph Black Building, Glasgow G12 8QQ, U.K.
- UK
Catalysis Hub, Research Complex at Harwell, STFC Rutherford Appleton Laboratory,
Chilton, Oxon OX11 0FA, U.K.
| | - Stewart F. Parker
- School
of Chemistry, University of Glasgow, Joseph Black Building, Glasgow G12 8QQ, U.K.
- UK
Catalysis Hub, Research Complex at Harwell, STFC Rutherford Appleton Laboratory,
Chilton, Oxon OX11 0FA, U.K.
- ISIS
Neutron and Muon Source, STFC Rutherford
Appleton Laboratory, Chilton, Oxon OX11 0QX, U.K.
- E-mail: . Phone: +44 (0)1235 446182
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Chapman S, O'Malley AJ, Parker SF, Raja R. Comprehensive Vibrational Spectroscopic Characterization of Nylon-6 Precursors for Precise Tracking of the Beckmann Rearrangement. Chemphyschem 2018; 19:3196-3203. [PMID: 30253015 DOI: 10.1002/cphc.201800721] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/27/2018] [Indexed: 11/05/2022]
Abstract
As a key step in nylon-6 synthesis, the Beckmann rearrangement is an ongoing target of catalytic studies that seek to improve the sustainability of polymer manufacture. Whilst solid-acid catalysts (predominantly zeotypes) have proven effective for this transformation, the development of more active and selective systems demands an understanding of fundamental catalytic mechanisms. In this undertaking, in situ and operando characterization techniques can be informative, provided rigorous spectroscopic groundwork is in place. Thus, to facilitate mechanistic studies we present a detailed investigation of the vibrational spectra of cyclohexanone, cyclohexanone oxime, ϵ-caprolactam and their D10-isotopomers, in the solid state. Variable-temperature infrared (150-300 K) and Raman (10-300 K) spectra are reported alongside inelastic neutron scattering data. Moreover, where key vibrational modes have been assigned with the aid of periodic density functional theory calculations, it has been possible to include hydrogen-bonding interactions explicitly.
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Affiliation(s)
- Stephanie Chapman
- School of Chemistry, University of Southampton, University Road, Southampton, SO17 1BJ, UK
| | - Alexander J O'Malley
- Centre for Sustainable Chemical Technologies (CSCT), Department of Chemistry, University of Bath, Bath, BA2 7AY, UK
- Cardiff Catalysis Institute, School of Chemistry, Cardiff University, Main Building, Park Place, Cardiff, CF10 3AT, UK
- UK Catalysis Hub, Research Complex at Harwell, Science and Technology Facilities Council Rutherford Appleton Laboratory, Harwell Science and Innovation Campus, Oxon, OX11 0QX, UK
| | - Stewart F Parker
- UK Catalysis Hub, Research Complex at Harwell, Science and Technology Facilities Council Rutherford Appleton Laboratory, Harwell Science and Innovation Campus, Oxon, OX11 0QX, UK
- ISIS Pulsed Neutron and Muon Facility, Science and Technology Facilities Council Rutherford Appleton Laboratory, Harwell Science and Innovation Campus, Oxon, OX11 0QX, UK
| | - Robert Raja
- School of Chemistry, University of Southampton, University Road, Southampton, SO17 1BJ, UK
- UK Catalysis Hub, Research Complex at Harwell, Science and Technology Facilities Council Rutherford Appleton Laboratory, Harwell Science and Innovation Campus, Oxon, OX11 0QX, UK
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