Using Redox-Active Ligands to Generate Actinide Ligand Radical Species

ChemFH: an integrated tool for screening frequent false positives in chemical biology and drug discovery

High-throughput screening rapidly tests an extensive array of chemical compounds to identify hit compounds for specific biological targets in drug discovery. However, false-positive results disrupt hit compound screening, leading to wastage of time and resources. To address this, we propose ChemFH, an integrated online platform facilitating rapid virtual evaluation of potential false positives, including colloidal aggregators, spectroscopic interference compounds, firefly luciferase inhibitors, chemical reactive compounds, promiscuous compounds, and other assay interferences. By leveraging a dataset containing 823 391 compounds, we constructed high-quality prediction models using multi-task directed message-passing network (DMPNN) architectures combining uncertainty estimation, yielding an average AUC value of 0.91. Furthermore, ChemFH incorporated 1441 representative alert substructures derived from the collected data and ten commonly used frequent hitter screening rules. ChemFH was validated with an external set of 75 compounds. Subsequently, the virtual screening capability of ChemFH was successfully confirmed through its application to five virtual screening libraries. Furthermore, ChemFH underwent additional validation on two natural products and FDA-approved drugs, yielding reliable and accurate results. ChemFH is a comprehensive, reliable, and computationally efficient screening pipeline that facilitates the identification of true positive results in assays, contributing to enhanced efficiency and success rates in drug discovery. ChemFH is freely available via https://chemfh.scbdd.com/.

Bis(acyl)phosphide Complexes of U(III)/U(IV): A Case of a Hidden Redox-Active Ligand

The recently reported tris(bis(2,4,6-triisopropylbenzoyl)-phosphide)uranium (UIII(trippBAP)3, 2) complex (Inorg. Chem. 2022, 61 (32), 12508-12517) demonstrated a silent 31P NMR spectrum. This complex was described as a U(III) complex with an organic radical ligand fragment. Moreover, the EPR spectrum of 2 was indicative of an organic radical in the ligand framework complexed to uranium, in contrast to that of UIV(mesBAP)4, 1. Herein, with the help of relativistic density functional theory (DFT) calculations, the electronic structures of 1, 2, and U(mesBAP)3 (4) are examined in an effort to understand the unusual 31P NMR spectrum of 2. Results indicate the reduction of the carbonyl bonds and delocalization of the electrons over the ligands, indicative of U → L backbonding. Additionally, the reduced acyl carbons are found to exist as ketyl radicals [O═C• -] that are responsible for the silent 31P NMR spectra of 2. These findings demonstrate the redox noninnocent nature of BAP- in 2 and 4, causing uranium to exist in a formal oxidation state of +4.

Synthesis and Structure of [η5-1,2,4-(Me3Si)3C5H2]2Th(bipy) and Its Reactivity toward Small Molecules

Halide exchange of (Cp3tms)2ThCl2 (1; Cp3tms = η5-1,2,4-(Me3Si)3C5H2) with Me3SiI furnishes (Cp3tms)2ThI2 (2), which is then reduced with potassium graphite (KC8) in the presence of 2,2'-bipyridine to give the thorium bipyridyl metallocene (Cp3tms)2Th(bipy) (3) in good yield. Complex 3 was fully characterized and readily reacted with various small molecules. For example, 3 may serve as a synthetic equivalent for the (Cp3tms)2Th(II) fragment when exposed to CuI, Ph2S2, organic azides, and CS2. Moreover, upon the addition of thiobenzophenone Ph2CS, p-methylbenzaldehyde (p-MeC6H4)CHO, benzophenone Ph2CO, amidate PhCONH(p-tolyl), seleno-ketone (p,p'-dimethoxy), selenobenzophenone (p-MeOPh)2CSe, di(p-tolyl)methanimine (p-tolyl)2C═NH, 1,2-di(benzylidene)hydrazine (PhCH═N)2, and nitriles PhCN, PhCH2CN, and Ph2CHCN C-C coupling results to give (Cp3tms)2Th[(bipy)(Ph2CS)] (8), (Cp3tms)2Th[(bipy)(p-MePhCHO)] (9), (Cp3tms)2Th[(bipy)(Ph2CO)] (10), (Cp3tms)2Th[(bipy){(p-tolylNH)(Ph)CO}] (11), (Cp3tms)2Th[(bipy){(p-MeOPh)2CSe}] (12), (Cp3tms)2Th[(bipy){(p-tolyl)2CNH}] (13), (Cp3tms)2Th[(bipy)(PhCHNN═CHPh)] (14), (Cp3tms)2Th[(bipy)(PhCN)] (16), (Cp3tms)2Th[(bipy)(PhCH2CN)] (17), and (Cp3tms)2Th[(bipy)(Ph2CHCN)] (18), respectively. However, when thiazole is added to 3, the dimeric sulfido complex [(Cp3tms)2Th]2[μ-(bipy)CH2NCHCHS]2 (15) can be isolated. Moreover, the addition of isonitriles such as Me3CNC and PhCH2NC to 3 results in C-N bond cleavage and C-C coupling processes to form the thorium isocyanido amido complexes (Cp3tms)2Th[4-(Me3C)bipy](NC) (19) and (Cp3tms)2Th[4-(PhCH2)bipy](NC) (20), respectively. Nevertheless, upon exposure of 3 to (trimethylsilyl)diazomethane Me3SiCHN2, the bis-amido complex (Cp3tms)2Th[5,6-(Me3SiCH)bipy] (21), concomitant with N2 release, is isolated.

Two-Electron Redox Reactivity of Thorium Supported by Redox-Active Tripodal Frameworks

The high stability of the + IVoxidation state limits thorium redox reactivity. Here we report the synthesis and the redox reactivity of two Th(IV) complexes supported by the arene-tethered tris(siloxide) tripodal ligands [(KOSiR2 Ar)3 -arene)]. The two-electron reduction of these Th(IV) complexes generates the doubly reduced [KTh((OSi(Ot Bu)2 Ar)3 -arene)(THF)2 ] (2OtBu ) and [K(2.2.2-cryptand)][Th((OSiPh2 Ar)3 -arene)(THF)2 ](2Ph -crypt) where the formal oxidation state of Th is +II. Structural and computational studies indicate that the reduction occurred at the arene anchor of the ligand. The robust tripodal frameworks store in the arene anchor two electrons that become available at the metal center for the two-electron reduction of a broad range of substrates (N2 O, COT, CHT, Ph2 N2 , Ph3 PS and O2 ) while retaining the ligand framework. This work shows that arene-tethered tris(siloxide) tripodal ligands allow implementation of two-electron redox chemistry at the thorium center while retaining the ligand framework unchanged.

Synthesis, Characterization, and Reduction of Thorium Pyridinediimine Complexes

A family of thorium complexes featuring the redox-noninnocent pyridinediimine ligand MesPDIMe was synthesized, including (MesPDIMe)ThCl4 (1-Th), (MesPDIMe)ThCl3(THF) (2-Th), (MesPDIMe)ThCl2(THF)2 (3-Th) and [(MesPDIMe)Th(THF)]2 (5-Th) Full characterization of these species shows that these complexes feature MesPDIMe in four different oxidation states. The electronic structures of these complexes have been explored using 1H NMR and electronic absorption spectroscopies, X-ray crystallography, and SQUID magnetometry where appropriate.

Fate of Oxidation States at Actinide Centers in Redox-Active Ligand Systems Governed by Energy Levels of 5 f Orbitals

We report the formation of a NpIV complex from the complexation of NpVI O2 2+ with the redox-active ligand tBu-pdiop2- =2,6-bis[N-(3,5-di-tert-butyl-2-hydroxyphenyl)iminomethyl]pyridine. To the best of our knowledge, this is the first example of the direct complexation-induced chemical reduction of NpVI O2 2+ to NpIV . In contrast, the complexation of UVI O2 2+ with tBu-pdiop2- did not induce the reduction of UVI O2 2+ , not even after the two-electron electrochemical reduction of [UVI O2 (tBu-pdiop)]. This contrast between the Np and U systems may be ascribed to the decrease of the energy of the 5 f orbitals in Np compared to those in U. The present findings indicate that the redox chemistry between UVI O2 2+ and NpVI O2 2+ should be clearly differentiated in redox-active ligand systems.

Unusual Actinyl Complexes with a Redox-Active N,S-Donor Ligand

Understanding the fundamental chemistry of soft N,S-donor ligands with actinides across the series is critical for separation science toward sustainable nuclear energy. This task is particularly challenging when the ligands are redox active. We herein report a series of actinyl complexes with a N,S-donor redox-active ligand that stabilizes different oxidation states across the actinide series. These complexes are isolated and characterized in the gas phase, along with high-level electronic structure studies. The redox-active N,S-donor ligand in the products, C₅H₄NS, acts as a monoanion in [U^VIO₂(C₅H₄NS^-)]⁺ but as a neutral radical with unpaired electrons localized on the sulfur atom in [Np^VO₂(C₅H₄NS^•)]⁺ and [Pu^VO₂(C₅H₄NS^•)]⁺, resulting in different oxidation states for uranium and transuranic elements. This is rationalized by considering the relative energy levels of actinyl(VI) 5f orbitals and S 3p lone pair orbitals of the C₅H₄NS^- ligand and the cooperativity between An-N and An-S bonds that provides additional stability for the transuranic elements.

Trends in the Electronic Structure and Chemical Bonding of a Series of Porphyrinoid-Uranyl Complexes

In this paper, we have explored the relativistic density functional theory study on a series of deprotonated porphyrinoid (Lⁿ) complexes of uranyl to investigate the geometrical structures and chemical bonding. The ligands bound with uranyl in the 1:1 complexes [UO₂(Lⁿ)]^x (n = 4, 5, 6; x = 0, -1, -2), showing more thermodynamic stability for "in-cavity" structures of L⁵ and L⁶ than that of the "side-on" structure of L⁴ and an increase in stability with the increase of negative charges, L^2- < L^3- < L^4-. Among the six ligands, the cyclo[6]pyrrole presents the best selectivity toward uranyl. Based on chemical bonding analyses, the U-N_L bond in the in-cavity complexes adopts a typical dative N_L → U bond with mainly ionic bonding and significant covalency, which comes from the significant orbital interaction of U 5f_ϕ6d_δ7s hybrid AOs and N_L 2p-based MOs. This work provides a systematic understanding of the coordination chemistry in uranyl pyrrole-containing macrocycle complexes and the nature of chemical bonding in such systems, which may provide inspirations for the future design of synthetic targets that could be relevant to actinide separations or in the remediation of spent nuclear fuel.

Dioxygen Splitting by a Tantalum(V) Complex Ligated by a Rigid, Redox Non-Innocent Pincer Ligand

The reaction of TaMe₃ Cl₂ with the rigid acridane-derived trisamine H₃ NNN yields the tantalum(V) complex [TaCl₂ (NNN^cat )]. Subsequent reaction with dioxygen results in the full four-electron reduction of O₂ yielding the oxido-bridged bimetallic complex [{TaCl₂ (NNN^sq )}₂ O]. This dinuclear complex features an open-shell ground state due to partial ligand oxidation and was comprehensively characterized by single crystal X-ray diffraction, LIFDI mass spectrometry, NMR, EPR, IR and UV/VIS/NIR spectroscopy. The mechanism of O₂ activation was investigated by DFT calculations revealing initial binding of O₂ to the tantalum(V) center followed by complete O₂ scission to produce a terminal oxido-complex.

Theoretical Investigation of Single-Molecule-Magnet Behavior in Mononuclear Dysprosium and Californium Complexes

Early-actinide-based (U, Np, and Pu) single-molecule magnets (SMMs) have yet to show magnetic properties similar to those of highly anisotropic lanthanide-based ones. However, there are not many studies exploring the late-actinides (more than half-filled f shells) as potential candidates for SMM applications. We computationally explored the electronic structure and magnetic properties of a hypothetical Cf(III) complex isostructural to the experimentally synthesized Dy(dbm)₃(bpy) complex (bpy = 2,2'-bipyridine; dbm = dibenzoylmethanoate) via multireference methods and compared them to those of the Dy(III) analogue. This study shows that the Cf(III) complex can behave as a SMM and has a greater magnetic susceptibility compared to other experimentally and computationally studied early-actinide-based (U, Np, and Pu) magnetic complexes. However, Cf spontaneously undergoes α-decay and converts to Cm. Thus, we also explored the isostructural Cm(III)-based complex. The computed magnetic susceptibility and g-tensor values show that the Cm(III) complex has poor SMM behavior in comparison to both the Dy(III) and Cf(III) complexes, suggesting that the performance of Cf(III)-based magnets may be affected by α-decay and can explain the poor performance of experimentally studied Cf(III)-based molecular magnets in the literature. Further, this study suggests that the ligand field is dominant in Cf(III), which helps to increase the magnetization blocking barrier by nearly 3 times that of its 4f congener.

Intrinsic reactivity of [η5-1,3-(Me3Si)2C5H3]2U(η4-C4Ph2) in small molecule activation

The uranium metallacyclocumulene, [η⁵-1,3-(Me₃Si)₂C₅H₃]₂U(η⁴-C₄Ph₂) (3) was isolated from the reaction mixture containing [η⁵-1,3-(Me₃Si)₂C₅H₃]₂UCl₂ (1), potassium graphite (KC₈) and 1,4-diphenylbutadiyne (PhCC-CCPh) in good yield. The reactivity of 3 towards various small organic molecules was evaluated. For example, while complex 3 shows no reactivity towards alkynes and 2,2'-bipyridine, it may deliver the [η⁵-1,3-(Me₃Si)₂C₅H₃]₂U(II) fragment in the presence of Ph₂E₂ (E = S, Se) and Ph₃CN₃, or react as a nucleophile in the presence of carbodiimides, isothiocyanates, aldehydes, ketones, and pyridine derivatives, forming five-, seven- or nine-membered heterometallacycles. On the contrary, addition of Ph₂CS to 3 induces CS bond cleavage yielding the dithiolate complex [η⁵-1,3-(Me₃Si)₂C₅H₃]₂U[S₂(C₁₂H₅Ph₅)] (14). In contrast, the closely related, but sterically more encumbered uranium metallacyclocumulene [η⁵-1,2,4-(Me₃Si)₃C₅H₂]₂U(η⁴-C₄Ph₂) (4) features a more limited reactivity which is restricted to mono- and double insertions with small unsaturated organic molecules such as isothiocyanates, ketones and nitriles.

Small-Molecule Activation Mediated by [η5-1,3-(Me3Si)2C5H3]2U(bipy)

The uranium bipyridyl metallocene, [η⁵-1,3-(Me₃Si)₂C₅H₃]₂U(bipy) (2), is readily accessible in good yield by adding potassium graphite (KC₈) to a mixture of [η⁵-1,3-(Me₃Si)₂C₅H₃]₂UCl₂ (1) and 2,2'-bipyridine. Compound 2 was fully characterized and employed for small-molecule activation. It has been demonstrated that 2 may serve as a synthon for [η⁵-1,3-(Me₃Si)₂C₅H₃]₂U(II) fragment in the presence of Ph₂E₂ (E = S, Se), alkynes, and a variety of hetero-unsaturated molecules such as diazabutadienes, azine (Ph₂C═N)₂, o-benzoquinone, pyridine N-oxide, CS₂, isothiocyanates, and organic azides. However, upon exposure of 2 to thio-ketone Ph₂CS, aldehyde p-MePhCHO, ketone Ph₂CO, imine PhCH═NPh, azine (PhCH═N)₂, and nitrile PhCN, it may also promote C-C coupling reactions forming [η⁵-1,3-(Me₃Si)₂C₅H₃]₂U[(bipy)(Ph₂CS)] (16), [η⁵-1,3-(Me₃Si)₂C₅H₃]₂U[(bipy)(p-MePhCHO)] (17), [η⁵-1,3-(Me₃Si)₂C₅H₃]₂U[(bipy)(Ph₂CO)] (18), [η⁵-1,3-(Me₃Si)₂C₅H₃]₂U[(bipy)(PhCHNPh)] (19), [η⁵-1,3-(Me₃Si)₂C₅H₃]₂U[(bipy)(PhCHNN═CHPh)] (20), and [η⁵-1,3-(Me₃Si)₂C₅H₃]₂U[(N₂C₁₀H₇C(Ph)NH)] (22), respectively, in quantitative conversion. Furthermore, in the presence of CuI, a single-electron transfer (SET) process is observed to yield the uranium(III) iodide complex [η⁵-1,3-(Me₃Si)₂C₅H₃]₂U(I)(bipy) (15).