1
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Curtis CJ, Habenšus I, Conradie J, Bardin AA, Nannenga BL, Ghosh A, Tomat E. Gold Tripyrrindione: Redox Chemistry and Reactivity with Dichloromethane. Inorg Chem 2024; 63:17188-17197. [PMID: 39215706 PMCID: PMC11583832 DOI: 10.1021/acs.inorgchem.4c02903] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 09/04/2024]
Abstract
The identification of ligands that stabilize Au(III) centers has led to the isolation of complexes for applications in catalysis, gold-based therapeutics, and functional materials. Herein, we report the coordination of gold by tripyrrin-1,14-dione, a linear tripyrrole with the scaffold of naturally occurring metabolites of porphyrin-based protein cofactors (e.g., heme). Tripyrrindione H3TD2 binds Au(III) as a trianionic tridentate ligand to form square planar complex [Au(TD2)(H2O)], which features an adventitious aqua ligand. Two reversible ligand-based oxidations of this complex allow access to the other known redox states of the tripyrrindione framework. Conversely, (spectro)electrochemical measurements and DFT analysis indicate that the reduction of the complex is likely metal-based. The chemical reduction of [Au(TD2)(H2O)] leads to a reactive species that utilizes dichloromethane in the formation of a cyclometalated organo-Au(III) complex. Both the aqua and the organometallic Au(III) complexes were characterized in the solid state by microcrystal electron diffraction (MicroED) methods, which were critical for the analysis of the microcrystalline sample of the organo-gold species. Overall, this study illustrates the synthesis of Au(III) tripyrrindione as well as its redox profile and reactivity leading to gold alkylation chemistry.
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Affiliation(s)
- Clayton J. Curtis
- Department of Chemistry and Biochemistry, The University of Arizona, 1306 E. University Blvd., Tucson, AZ 85721, USA
| | - Iva Habenšus
- Department of Chemistry and Biochemistry, The University of Arizona, 1306 E. University Blvd., Tucson, AZ 85721, USA
| | - Jeanet Conradie
- Department of Chemistry, University of the Free State, Bloemfontein 9300, Republic of South Africa
- Department of Chemistry, UiT – The Arctic University of Norway, N-9037 Tromsø, Norway
| | - Andrey A. Bardin
- Center for Applied Structural Discovery, The Biodesign Institute, Arizona State University, Tempe, AZ 85281, USA
- Chemical Engineering, School for Engineering of Matter, Transport and Energy, Arizona State University, Tempe, AZ 85287, USA
| | - Brent L. Nannenga
- Center for Applied Structural Discovery, The Biodesign Institute, Arizona State University, Tempe, AZ 85281, USA
- Chemical Engineering, School for Engineering of Matter, Transport and Energy, Arizona State University, Tempe, AZ 85287, USA
| | - Abhik Ghosh
- Department of Chemistry, UiT – The Arctic University of Norway, N-9037 Tromsø, Norway
| | - Elisa Tomat
- Department of Chemistry and Biochemistry, The University of Arizona, 1306 E. University Blvd., Tucson, AZ 85721, USA
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2
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Huxter VM. Advancing Organic Photoredox Catalysis: Mechanistic Insight through Time-Resolved Spectroscopy. J Phys Chem Lett 2024:7945-7953. [PMID: 39074366 DOI: 10.1021/acs.jpclett.4c00895] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 07/31/2024]
Abstract
The rapid development of light-activated organic photoredox catalysts has led to the proliferation of powerful synthetic chemical strategies with industrial and pharmaceutical applications. Despite the advancement in synthetic approaches, a detailed understanding of the mechanisms governing these reactions has lagged. Time-resolved optical spectroscopy provides a method to track organic photoredox catalysis processes and reveal the energy pathways that drive reaction mechanisms. These measurements are sensitive to key processes in organic photoredox catalysis such as charge or energy transfer, lifetimes of singlet or triplet states, and solvation dynamics. The sensitivity and specificity of ultrafast spectroscopic measurements can provide a new perspective on the mechanisms of these reactions, including electron-transfer events, the role of solvent, and the short lifetimes of radical intermediates.
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Affiliation(s)
- Vanessa M Huxter
- Department of Chemistry and Biochemistry, University of Arizona, Tucson, Arizona 85721, United States
- Department of Physics, University of Arizona, Tucson, Arizona 85721, United States
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3
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Ross DL, Jasniewski AJ, Ziller JW, Bominaar EL, Hendrich MP, Borovik AS. Modulation of the Bonding between Copper and a Redox-Active Ligand by Hydrogen Bonds and Its Effect on Electronic Coupling and Spin States. J Am Chem Soc 2024; 146:500-513. [PMID: 38150413 PMCID: PMC11160172 DOI: 10.1021/jacs.3c09983] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/29/2023]
Abstract
The exchange coupling of electron spins can strongly influence the properties of chemical species. The regulation of this type of electronic coupling has been explored within complexes that have multiple metal ions but to a lesser extent in complexes that pair a redox-active ligand with a single metal ion. To bridge this gap, we investigated the interplay among the structural and magnetic properties of mononuclear Cu complexes and exchange coupling between a Cu center and a redox-active ligand over three oxidation states. The computational analysis of the structural properties established a relationship between the complexes' magnetic properties and a bonding interaction involving a dx2-y2 orbital of the Cu ion and π orbital of the redox-active ligand that are close in energy. The additional bonding interaction affects the geometry around the Cu center and was found to be influenced by intramolecular H-bonds introduced by the external ligands. The ability to synthetically tune the d-π interactions using H-bonds illustrates a new type of control over the structural and magnetic properties of metal complexes.
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Affiliation(s)
- Dolores L Ross
- Department of Chemistry, 1102 Natural Science II, University of California, Irvine, California 92697, United States
| | - Andrew J Jasniewski
- Department of Molecular Biology and Biochemistry, University of California, Irvine, California 92697, United States
| | - Joseph W Ziller
- Department of Chemistry, 1102 Natural Science II, University of California, Irvine, California 92697, United States
| | - Emile L Bominaar
- Department of Chemistry, Carnegie Mellon University, Pittsburgh, Pennsylvania 15213, United States
| | - Michael P Hendrich
- Department of Chemistry, Carnegie Mellon University, Pittsburgh, Pennsylvania 15213, United States
| | - A S Borovik
- Department of Chemistry, 1102 Natural Science II, University of California, Irvine, California 92697, United States
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4
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Kumar A, Thompson B, Gautam R, Tomat E, Huxter V. Temperature-Dependent Spin-Driven Dimerization Determines the Ultrafast Dynamics of a Copper(II)-Bound Tripyrrindione Radical. J Phys Chem Lett 2023; 14:11268-11273. [PMID: 38060441 DOI: 10.1021/acs.jpclett.3c02726] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/22/2023]
Abstract
Radicals and other open-shell molecules play a central role in chemical transformations and redox chemistry. While radicals are often highly reactive, stable radical systems are desirable for a range of potential applications, ranging from materials chemistry and catalysis to spintronics and quantum information. Here we investigate the ultrafast properties of a stable radical system with temperature-dependent spin-tunable properties. This radical complex, Cu(II) hexaethyl tripyrrin-1,14-dione, accommodates unpaired electrons localized on both the copper metal center and the tripyrrolic ligand. The unusual combination of two unpaired electrons and high stability in this radical molecule enable switchable temperature-dependent spin coupling. Two-dimensional electronic spectroscopy measurements of Cu(II) hexaethyl tripyrrin-1,14-dione were collected at room temperature and at 77 K. At room temperature, the molecules are present as monomers and have short picosecond lifetimes. At 77 K, the molecules are present in a dimer form mediated by ferromagnetic and antiferromagnetic coupling. This reversible spin-driven dimerization changes the optical properties of the system, generating long-lived excitonic states.
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Affiliation(s)
- Anshu Kumar
- Department of Chemistry and Biochemistry, University of Arizona, Tucson, Arizona 85721, United States
- Department of Physics, University of Arizona, Tucson, Arizona 85721, United States
| | - Benjamin Thompson
- Department of Chemistry and Biochemistry, University of Arizona, Tucson, Arizona 85721, United States
- Department of Optical Sciences, University of Arizona, Tucson, Arizona 85721, United States
| | - Ritika Gautam
- Department of Chemistry and Biochemistry, University of Arizona, Tucson, Arizona 85721, United States
| | - Elisa Tomat
- Department of Chemistry and Biochemistry, University of Arizona, Tucson, Arizona 85721, United States
| | - Vanessa Huxter
- Department of Chemistry and Biochemistry, University of Arizona, Tucson, Arizona 85721, United States
- Department of Physics, University of Arizona, Tucson, Arizona 85721, United States
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5
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Shah SJ, Pandit YA, Garribba E, Ishida M, Rath SP. Stable Dication Diradicals of Triply Fused Metallo Chlorin-Porphyrin Heterodimers: Impact of the Bridge on the Control of Spin Coupling to Reactivity. Chemistry 2023; 29:e202301963. [PMID: 37602834 DOI: 10.1002/chem.202301963] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/20/2023] [Revised: 08/16/2023] [Accepted: 08/16/2023] [Indexed: 08/22/2023]
Abstract
We report an unexpected rearrangement, controlled by the nature of the bridge, leading to the formation of novel, remarkably stable triply fused dinickel(II)/dicopper(II) chlorin-porphyrin dication diradical heterodimers in excellent yields. Here, a dipyrromethene bridge gets completely fused between two porphyrin macrocycles with two new C-C and one C-N bonds. The two macrocycles exhibit extensive π-conjugation through the bridge, which results in an antiferromagnetic coupling between the two π-cation radicals. In addition, the macrocyclic distortion also favours a rare intramolecular ferromagnetic interaction between the CuII and π-cation radical spins to form a triplet state. The structural and electronic perturbation in the unconjugated dication diradical possibly enables the bridging pyrrolic nitrogen to undergo a nucleophilic attack at the nearby β-carbon of the porphyrin π-cation radical with a computed free energy barrier of >20 kcal mol-1 which was supplied in the form of reflux condition to initiate such a rearrangement process. UV-vis, EPR and ESI-MS spectroscopies were used to monitor the rearrangement process in situ in order to identify the key reactive intermediates leading to such an unusual transformation.
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Affiliation(s)
- Syed Jehanger Shah
- Department of Chemistry, Indian Institute of Technology Kanpur, Kanpur, 208016, India
| | - Younis Ahmad Pandit
- Department of Chemistry, Indian Institute of Technology Kanpur, Kanpur, 208016, India
| | - Eugenio Garribba
- Dipartimento di Medicina, Chirurgia e Farmacia, Università di Sassari, Viale San Pietro, 07100, Sassari, Italy
| | - Masatoshi Ishida
- Department of Chemistry, Graduate School of Science, Tokyo Metropolitan University, Tokyo, 192-0397, Japan
| | - Sankar Prasad Rath
- Department of Chemistry, Indian Institute of Technology Kanpur, Kanpur, 208016, India
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6
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Quiroz M, Lockart MM, Xue S, Jones D, Guo Y, Pierce BS, Dunbar KR, Hall MB, Darensbourg MY. Magnetic coupling between Fe(NO) spin probe ligands through diamagnetic Ni II, Pd II and Pt II tetrathiolate bridges. Chem Sci 2023; 14:9167-9174. [PMID: 37655023 PMCID: PMC10466285 DOI: 10.1039/d3sc01546g] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/23/2023] [Accepted: 08/07/2023] [Indexed: 09/02/2023] Open
Abstract
Reaction of the nitrosylated-iron metallodithiolate ligand, paramagnetic (NO)Fe(N2S2), with [M(CH3CN)n][BF4]2 salts (M = NiII, PdII, and PtII; n = 4 or 6) affords di-radical tri-metallic complexes in a stairstep type arrangement ([FeMFe]2+, M = Ni, Pd, and Pt), with the central group 10 metal held in a MS4 square plane. These isostructural compounds have nearly identical ν(NO) stretching values, isomer shifts, and electrochemical properties, but vary in their magnetic properties. Despite the intramolecular Fe⋯Fe distances of ca. 6 Å, antiferromagnetic coupling is observed between {Fe(NO)}7 units as established by magnetic susceptibility, EPR, and DFT studies. The superexchange interaction through the thiolate sulfur and central metal atoms is on the order of NiII < PdII ≪ PtII with exchange coupling constants (J) of -3, -23, and -124 cm-1, consistent with increased covalency of the M-S bonds (3d < 4d < 5d). This trend is reproduced by DFT calculations with molecular orbital analysis providing insight into the origin of the enhancement in the exchange interaction. Specifically, the magnitude of the exchange interaction correlates surprisingly well with the energy difference between the HOMO and HOMO-1 orbitals of the triplet states, which is reflected in the central metal's contribution to these orbitals. These results demonstrate the ability of sulfur-dense metallodithiolate ligands to engender strong magnetic communication by virtue of their enhanced covalency and polarizability.
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Affiliation(s)
- Manuel Quiroz
- Department of Chemistry, Texas A &M University College Station Texas 77843 USA
| | - Molly M Lockart
- Department of Chemistry & Biochemistry, Samford University Birmingham Alabama 35229 USA
| | - Shan Xue
- Department of Chemistry, Carnegie Mellon University Pittsburgh Pennsylvania 15213 USA
| | - Dakota Jones
- Department of Chemistry, Texas A &M University College Station Texas 77843 USA
| | - Yisong Guo
- Department of Chemistry, Carnegie Mellon University Pittsburgh Pennsylvania 15213 USA
| | - Brad S Pierce
- Department of Chemistry & Biochemistry, University of Alabama Tuscaloosa Alabama 35487 USA
| | - Kim R Dunbar
- Department of Chemistry, Texas A &M University College Station Texas 77843 USA
| | - Michael B Hall
- Department of Chemistry, Texas A &M University College Station Texas 77843 USA
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7
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Tomat E, Curtis CJ, Astashkin AV, Conradie J, Ghosh A. Multicenter interactions and ligand field effects in platinum(II) tripyrrindione radicals. Dalton Trans 2023; 52:6559-6568. [PMID: 37185585 DOI: 10.1039/d3dt00894k] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/17/2023]
Abstract
The tripyrrin-1,14-dione biopyrrin, which shares the scaffold of several naturally occurring heme metabolites, is a redox-active platform for metal coordination. We report the synthesis of square planar platinum(II) tripyrrindiones, in which the biopyrrin binds as a tridentate radical and the fourth coordination position is occupied by either aqua or tert-butyl isocyanide ligands. These complexes are stable through chromatographic purification and exposure to air. Electron paramagnetic resonance (EPR) data and density functional theory (DFT) analysis confirm that the spin density is located predominantly on the tripyrrindione ligand. Pancake bonding in solution between the Pt(II) tripyrrindione radicals leads to the formation of diamagnetic π dimers at low temperatures. The identity of the monodentate ligand (i.e., aqua vs. isocyanide) affects both the thermodynamic parameters of dimerization and the tripyrrindione-based redox processes in these complexes. Isolation and structural characterization of the oxidized complexes revealed stacking of the diamagnetic tripyrrindiones in the solid state as well as a metallophilic Pt(II)-Pt(II) contact in the case of the aqua complex. Overall, the properties of Pt(II) tripyrrindiones, including redox potentials and intermolecular interactions in solution and in the solid state, are modulated through easily accessible changes in the redox state of the biopyrrin ligand or the nature of the monodentate ligand.
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Affiliation(s)
- Elisa Tomat
- Department of Chemistry and Biochemistry, The University of Arizona, 1306 E. University Blvd., Tucson, AZ 85721-0041, USA.
| | - Clayton J Curtis
- Department of Chemistry and Biochemistry, The University of Arizona, 1306 E. University Blvd., Tucson, AZ 85721-0041, USA.
| | - Andrei V Astashkin
- Department of Chemistry and Biochemistry, The University of Arizona, 1306 E. University Blvd., Tucson, AZ 85721-0041, USA.
| | - Jeanet Conradie
- Department of Chemistry, University of the Free State, Bloemfontein 9300, Republic of South Africa
- Department of Chemistry, UiT - The Arctic University of Norway, N-9037 Tromsø, Norway.
| | - Abhik Ghosh
- Department of Chemistry, UiT - The Arctic University of Norway, N-9037 Tromsø, Norway.
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8
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Roy S, Paul S, Misra A. A Theoretical Account of the Coupling between Metal- and Ligand-centred Spins. Chemphyschem 2023; 24:e202200889. [PMID: 36622254 DOI: 10.1002/cphc.202200889] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/04/2022] [Revised: 01/04/2023] [Accepted: 01/09/2023] [Indexed: 01/10/2023]
Abstract
This study addresses the magnetic interaction between paramagnetic metal ions and the radical ligands taking the [CuII (hfac)2 (imVDZ)] and [MII (hfac)2 (pyDTDA)] (imVDZ=1,5-dimethyl-3-(1-methyl-2-imidazolyl)-6-oxoverdazyl; hfac=(1,1,1,5,5,5)hexafluroacetylacetonate; pyDTDA=4-(2'-pyridyl)-1,2,3,5-dithiadiazolyl), (M=Cu, Ni, Co, Fe, Mn) compounds as reference systems. The coupling between the metal and ligand spins is quantified in terms of the exchange coupling constant (J) in the platform of density functional theory (DFT) and the wave function-based complete active space self-consistent field (CASSCF) method. Application of DFT and broken symmetry (BS) formalism results ferromagnetic coupling for all the transition metal complexes except the Mn(II) complex. This DFT-BS prediction of magnetic nature matches with the experimental finding for all the complexes other than the Fe(II)-pyDTDA complex, for which an antiferromagnetic coupling between high spin iron and the thiazyl ligand has been reported. However, evaluation of spin state energetics through the multiconfigurational wave function-based method produces the S=3/2 ground spin state for the iron-thiazyl in parity with experiment. Electronic structure analyses find the overlap between the metal- and ligand-based singly occupied molecular orbitals (SOMOs) to be one of the major reasons attributing to different extent of exchange coupling in the systems under investigation.
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Affiliation(s)
- Sriparna Roy
- Department of Chemistry, University of North Bengal, Siliguri, Darjeeling , 734013, India
| | - Satadal Paul
- Department of Chemistry, Bangabasi Morning College, 19 R.C Sarani, Kolkata, 700009, India
| | - Anirban Misra
- Department of Chemistry, University of North Bengal, Siliguri, Darjeeling , 734013, India
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9
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Cho B, Swain A, Gautam R, Tomat E, Huxter VM. Time-resolved dynamics of stable open- and closed-shell neutral radical and oxidized tripyrrindione complexes. Phys Chem Chem Phys 2022; 24:15718-15725. [PMID: 35730195 DOI: 10.1039/d2cp00632d] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Stable open- and closed-shell Pd(II) and Cu(II) complexes of hexaethyl tripyrrin-1,14-dione (TD1) produce triplet, doublet or singlet states depending on the metal center and the redox state of the ligand. Pd(II) and Cu(II) form neutral TD1 complexes featuring ligand-based radicals, thus resulting in doublet and triplet states, respectively. The reversible one-electron oxidation of the complexes removes an unpaired electron from the ligand, generating singlet and doublet states. The optical properties and time-resolved dynamics of these systems are studied here using steady-state and ultrafast transient absorption (pump-probe) measurements. Fast relaxation with recovery of the ground state in tens of picoseconds is observed for the copper neutral radical and oxidized complexes as well as for the palladium neutral radical complex. Significantly longer timescales are observed for the oxidized palladium complex. The ability to tune the overall spin state of the complexes through their stable open-shell configurations as well as the reversible redox activity of the tripyrrolic systems makes them particularly interesting for catalytic applications as well as exploring magnetism and conductivity properties.
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Affiliation(s)
- Byungmoon Cho
- Department of Chemistry and Biochemistry, The University of Arizona, Tucson, Arizona, 85721, USA.
| | - Alicia Swain
- Department of Chemistry and Biochemistry, The University of Arizona, Tucson, Arizona, 85721, USA.
| | - Ritika Gautam
- Department of Chemistry and Biochemistry, The University of Arizona, Tucson, Arizona, 85721, USA.
| | - Elisa Tomat
- Department of Chemistry and Biochemistry, The University of Arizona, Tucson, Arizona, 85721, USA.
| | - Vanessa M Huxter
- Department of Chemistry and Biochemistry, The University of Arizona, Tucson, Arizona, 85721, USA. .,Department of Physics, The University of Arizona, Tucson, Arizona, 85721, USA
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10
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Tomat E, Curtis CJ. Biopyrrin Pigments: From Heme Metabolites to Redox-Active Ligands and Luminescent Radicals. Acc Chem Res 2021; 54:4584-4594. [PMID: 34870973 DOI: 10.1021/acs.accounts.1c00613] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/16/2022]
Abstract
Redox-active ligands in coordination chemistry not only modulate the reactivity of the bound metal center but also serve as electron reservoirs to store redox equivalents. Among many applications in contemporary chemistry, the scope of redox-active ligands in biology is exemplified by the porphyrin radicals in the catalytic cycles of multiple heme enzymes (e.g., cytochrome P450, catalase) and the chlorophyll radicals in photosynthetic systems. This Account reviews the discovery of two redox-active ligands inspired by oligopyrrolic fragments found in biological settings as products of heme metabolism.Linear oligopyrroles, in which pyrrole heterocycles are linked by methylene or methine bridges, are ubiquitous in nature as part of the complex, multistep biosynthesis and degradation of hemes and chlorophylls. Bile pigments, such as biliverdin and bilirubin, are common and well-studied tetrapyrroles with characteristic pyrrolin-2-one rings at both terminal positions. The coordination chemistry of these open-chain pigments is less developed than that of porphyrins and other macrocyclic oligopyrroles; nevertheless, complexes of biliverdin and its synthetic analogs have been reported, along with fluorescent zinc complexes of phytobilins employed as bioanalytical tools. Notably, linear conjugated tetrapyrroles inherit from porphyrins the ability to stabilize unpaired electrons within their π system. The isolated complexes, however, present helical structures and generally limited stability.Smaller biopyrrins, which feature three or two pyrrole rings and the characteristic oxidized termini, have been known for several decades following their initial isolation as urinary pigments and heme metabolites. Although their coordination chemistry has remained largely unexplored, these compounds are structurally similar to the well-established tripyrrin and dipyrrin ligands employed in a broad variety of metal complexes. In this context, our study of the coordination chemistry of tripyrrin-1,14-dione and dipyrrin-1,9-dione was motivated by the potential to retain on these compact, versatile platforms the reversible ligand-based redox chemistry of larger tetrapyrrolic systems.The tripyrrindione ligand coordinates several divalent transition metals (i.e., Pd(II), Ni(II) Cu(II), Zn(II)) to form neutral complexes in which an unpaired electron is delocalized over the conjugated π system. These compounds, which are stable at room temperature and exposed to air, undergo reversible one-electron processes to access different redox states of the ligand system without affecting the oxidation state and coordination geometry of the metal center. We also characterized ligand-based radicals on the dipyrrindione platform in both homoleptic and heteroleptic complexes. In addition, this study documented noncovalent interactions (e.g., interligand hydrogen bonds with the pyrrolinone carbonyls, π-stacking of ligand-centered radicals) as important aspects of this coordination chemistry. Furthermore, the fluorescence of the zinc-bound tripyrrindione radical and the redox-switchable emission of a dipyrrindione BODIPY-type fluorophore showcased the potential interplay of redox chemistry and luminescence in these compounds. Supported by computational analyses, the portfolio of properties revealed by this investigation takes the tripyrrindione and dipyrrindione motifs of heme metabolites to the field of redox-active ligands, where they are positioned to offer new opportunities for catalysis, sensing, supramolecular systems, and functional materials.
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Affiliation(s)
- Elisa Tomat
- Department of Chemistry and Biochemistry, The University of Arizona, Tucson, Arizona 85721-0041, United States
| | - Clayton J. Curtis
- Department of Chemistry and Biochemistry, The University of Arizona, Tucson, Arizona 85721-0041, United States
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11
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Curtis CJ, Astashkin AV, Conradie J, Ghosh A, Tomat E. Ligand-Centered Triplet Diradical Supported by a Binuclear Palladium(II) Dipyrrindione. Inorg Chem 2021; 60:12457-12466. [PMID: 34347474 PMCID: PMC8389801 DOI: 10.1021/acs.inorgchem.1c01691] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
![]()
Oligopyrroles
form
a versatile class of redox-active ligands and
electron reservoirs. Although the stabilization of radicals within
oligopyrrolic π systems is more common for macrocyclic ligands,
bidentate dipyrrindiones are emerging as compact platforms for one-electron
redox chemistry in transition-metal complexes. We report the synthesis
of a bis(aqua) palladium(II) dipyrrindione complex and its deprotonation-driven
dimerization to form a hydroxo-bridged binuclear complex in the presence
of water or triethylamine. Electrochemical, spectroelectrochemical,
and computational analyses of the binuclear complex indicate the accessibility
of two quasi-reversible ligand-centered reduction processes. The product
of a two-electron chemical reduction by cobaltocene was isolated and
characterized. In the solid state, this cobaltocenium salt features
a folded dianionic complex that maintains the hydroxo bridges between
the divalent palladium centers. X-band and Q-band EPR spectroscopic
experiments and DFT computational analysis allow assignment of the
dianionic species as a diradical with spin density almost entirely
located on the two dipyrrindione ligands. As established from the
EPR temperature dependence, the associated exchange coupling is weak
and antiferromagnetic (J ≈ −2.5 K),
which results in a predominantly triplet state at the temperatures
at which the measurements have been performed. The coordination and redox chemistry of the dipyrrindione
scaffold, which is found in several heme metabolites, is investigated
in heteroleptic palladium(II) complexes. The bis(aqua) complex undergoes
a deprotonation-driven dimerization to form a hydroxo-bridged binuclear
species. Crystallographic, electrochemical, and spectroscopic data,
as well as computational analysis, demonstrate that a two-electron
reduction of the binuclear complex leads to a diradical dianion with
spin density delocalized over the two dipyrrindione ligands.
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Affiliation(s)
- Clayton J Curtis
- Department of Chemistry and Biochemistry, The University of Arizona, 1306 East University Blvd., Tucson, Arizona 85721, United States
| | - Andrei V Astashkin
- Department of Chemistry and Biochemistry, The University of Arizona, 1306 East University Blvd., Tucson, Arizona 85721, United States
| | - Jeanet Conradie
- Department of Chemistry, University of the Free State, P.O. Box 339, Bloemfontein 9300, Republic of South Africa.,Department of Chemistry, UiT - The Arctic University of Norway, N-9037 Tromsø, Norway
| | - Abhik Ghosh
- Department of Chemistry, UiT - The Arctic University of Norway, N-9037 Tromsø, Norway
| | - Elisa Tomat
- Department of Chemistry and Biochemistry, The University of Arizona, 1306 East University Blvd., Tucson, Arizona 85721, United States
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12
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Rodríguez I, Gautam R, Tinoco AD. Using X-ray Diffraction Techniques for Biomimetic Drug Development, Formulation, and Polymorphic Characterization. Biomimetics (Basel) 2020; 6:1. [PMID: 33396786 PMCID: PMC7838816 DOI: 10.3390/biomimetics6010001] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/19/2020] [Revised: 12/19/2020] [Accepted: 12/23/2020] [Indexed: 12/31/2022] Open
Abstract
Drug development is a decades-long, multibillion dollar investment that often limits itself. To decrease the time to drug approval, efforts are focused on drug targets and drug formulation for optimal biocompatibility and efficacy. X-ray structural characterization approaches have catalyzed the drug discovery and design process. Single crystal X-ray diffraction (SCXRD) reveals important structural details and molecular interactions for the manifestation of a disease or for therapeutic effect. Powder X-ray diffraction (PXRD) has provided a method to determine the different phases, purity, and stability of biological drug compounds that possess crystallinity. Recently, synchrotron sources have enabled wider access to the study of noncrystalline or amorphous solids. One valuable technique employed to determine atomic arrangements and local atom ordering of amorphous materials is the pair distribution function (PDF). PDF has been used in the study of amorphous solid dispersions (ASDs). ASDs are made up of an active pharmaceutical ingredient (API) within a drug dispersed at the molecular level in an amorphous polymeric carrier. This information is vital for appropriate formulation of a drug for stability, administration, and efficacy purposes. Natural or biomimetic products are often used as the API or the formulation agent. This review profiles the deep insights that X-ray structural techniques and associated analytical methods can offer in the development of a drug.
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Affiliation(s)
- Israel Rodríguez
- Department of Chemistry, University of Puerto Rico Río Piedras, San Juan, PR 00925, USA
| | - Ritika Gautam
- Department of Chemistry, Indian Institute of Technology Kanpur, Kanpur 208016, India
| | - Arthur D. Tinoco
- Department of Chemistry, University of Puerto Rico Río Piedras, San Juan, PR 00925, USA
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Imafuku M, Oki S, Suzuki M. Bromine‐Terminated
β
‐Alkyl‐Substituted Tripyrrin: Reactivity, Coordination Ability, and Role as Extendable Acyclic Oligo‐Pyrrole Ligand. ChemistrySelect 2020. [DOI: 10.1002/slct.202001412] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
Affiliation(s)
- Masato Imafuku
- Interdisciplinary Graduate School of Science and EngineeringShimane University 1060 Nishikawatsu-cho Matsue, Shimane 690-8504 Japan
| | - Setsuna Oki
- Interdisciplinary Graduate School of Science and EngineeringShimane University 1060 Nishikawatsu-cho Matsue, Shimane 690-8504 Japan
| | - Masaaki Suzuki
- Interdisciplinary Graduate School of Science and EngineeringShimane University 1060 Nishikawatsu-cho Matsue, Shimane 690-8504 Japan
- Graduate School of Natural Science and TechnologyShimane University 1060 Nishikawatsu-cho, Matsue Shimane 690-8504 Japan
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14
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Curtis CJ, Tomat E. Heteroleptic palladium(II) complexes of dipyrrin-1,9-dione supported by intramolecular hydrogen bonding. J PORPHYR PHTHALOCYA 2020. [DOI: 10.1142/s1088424619501062] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
Abstract
The dipyrrin-1,9-dione framework, which is characteristic of the propentdyopent pigments deriving from heme metabolism, coordinates metal ions as monoanionic bidentate donors. The resulting analogs of dipyrrinato complexes undergo reversible ligand-based reductions, thus showcasing the ability of the dipyrrindione scaffold to act as an electron reservoir. Herein we report the synthesis and characterization of three heteroleptic palladium complexes of the redox-active dipyrrindione ligand. Primary amines were chosen as additional ligands so as to assemble complexes of planar geometries with complementary interligand hydrogen-bonding. Full chemical characterization confirms the hydrogen bonding interactions between the primary amine ligands and the acceptor carbonyl groups on the dipyrrolic ligand. The resulting heteroleptic compounds display reversible one-electron reduction events that are centered on the dipyrrindione ligand as revealed by voltammetry and spectroelectrochemistry data. Within these planar Pd(II) complexes, the propentdyopent motif therefore combines reversible ligand-based redox chemistry with interligand hydrogen bonding in the primary coordination sphere of the metal center.
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Affiliation(s)
- Clayton J. Curtis
- The University of Arizona, Department of Chemistry and Biochemistry, 1306 E. University Blvd., Tucson AZ 85721, USA
| | - Elisa Tomat
- The University of Arizona, Department of Chemistry and Biochemistry, 1306 E. University Blvd., Tucson AZ 85721, USA
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15
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Abstract
Propentdyopents are naturally occurring dipyrroles deriving from the metabolism of heme and characterized by a dipyrrin-1,9-dione motif. The unusual name propentdyopent is due to the first colorimetric method (the Stokvis reaction) for the detection of these compounds, which were initially isolated from urine samples. Upon reduction in alkaline solutions, they produced red species that were termed pentdyopents to describe with Greek numerals their absorption maximum (525 nm) in the visible range. The precursors to the red pentdyopents were thus indicated as propentdyopents.Over the course of several decades, these dipyrrolic compounds have appeared in several studies of human physiology, typically associated to conditions of abnormal heme metabolism and/or oxidative stress. Concurrently, synthetic investigations have confirmed their chemical structure, reactivity, and ability to coordinate metals as bidentate monoanionic ligands. Notably, the planar dipyrrindione platform can undergo reversible one-electron redox processes and thereby act as an electron reservoir in metal complexes. In combination with the documented ability of the carbonyl groups to act as hydrogen-bonding acceptors, the coordination chemistry of propentdyopents could lead to new applications for this old class of pigments. Furthermore, the observation of these pigments in several clinical contexts could potentially delineate a role of propentdyopents as diagnostic biomarkers. This mini-review summarizes both the chemistry and biology of propentdyopents while highlighting the ample space for new discoveries.
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Affiliation(s)
- Elisa Tomat
- The University of Arizona, Department of Chemistry and Biochemistry, 1306 E. University Blvd., Tucson AZ 85721, USA
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16
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Recent advances in the chemistry of group 9—Pincer organometallics. ADVANCES IN ORGANOMETALLIC CHEMISTRY 2020. [DOI: 10.1016/bs.adomc.2019.09.002] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/23/2022]
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17
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van der Vlugt JI. Redox-Active Pincer Ligands. TOP ORGANOMETAL CHEM 2020. [DOI: 10.1007/3418_2020_68] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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18
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Swain A, Cho B, Gautam R, Curtis CJ, Tomat E, Huxter V. Ultrafast Dynamics of Tripyrrindiones in Solution Mediated by Hydrogen-Bonding Interactions. J Phys Chem B 2019; 123:5524-5535. [DOI: 10.1021/acs.jpcb.9b01916] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/14/2023]
Affiliation(s)
- Alicia Swain
- Department of Chemistry and Biochemistry, University of Arizona, Tucson, Arizona 85721, United States
| | - Byungmoon Cho
- Department of Chemistry and Biochemistry, University of Arizona, Tucson, Arizona 85721, United States
| | - Ritika Gautam
- Department of Chemistry and Biochemistry, University of Arizona, Tucson, Arizona 85721, United States
| | - Clayton J. Curtis
- Department of Chemistry and Biochemistry, University of Arizona, Tucson, Arizona 85721, United States
| | - Elisa Tomat
- Department of Chemistry and Biochemistry, University of Arizona, Tucson, Arizona 85721, United States
| | - Vanessa Huxter
- Department of Chemistry and Biochemistry, University of Arizona, Tucson, Arizona 85721, United States
- Department of Physics, University of Arizona, Tucson, Arizona 85721, United States
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19
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van der Vlugt JI. Radical-Type Reactivity and Catalysis by Single-Electron Transfer to or from Redox-Active Ligands. Chemistry 2019; 25:2651-2662. [PMID: 30084211 PMCID: PMC6471147 DOI: 10.1002/chem.201802606] [Citation(s) in RCA: 127] [Impact Index Per Article: 21.2] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/23/2018] [Indexed: 12/12/2022]
Abstract
Controlled ligand-based redox-activity and chemical non-innocence are rapidly gaining importance for selective (catalytic) processes. This Concept aims to provide an overview of the progress regarding ligand-to-substrate single-electron transfer as a relatively new mode of operation to exploit ligand-centered reactivity and catalysis based thereon.
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Affiliation(s)
- Jarl Ivar van der Vlugt
- Bio-Inspired Homogeneous and Supramolecular Catalysis Groupvan ‘t Hoff Institute for Molecular SciencesUniversity of AmsterdamScience Park 9041098 XHAmsterdamNetherlands
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20
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Rad-Yousefnia N, Shaabani B, Korabik M, Weselski M, Zahedi M, Englert U, Bikas R, Szeliga D, Otręba M, Lis T. Magnetic dimensionality and the crystal structure of two copper(ii) coordination polymers containing Cu6 and Cu2 building units. Dalton Trans 2019; 48:11421-11432. [DOI: 10.1039/c9dt01728c] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
The preparation, structural characterization, EPR spectroscopy and magnetic structural correlation of two Cu(ii) coordination polymers are reported.
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Affiliation(s)
- Negar Rad-Yousefnia
- Department of Inorganic Chemistry
- Faculty of Chemistry
- University of Tabriz
- Tabriz
- Iran
| | - Behrouz Shaabani
- Department of Inorganic Chemistry
- Faculty of Chemistry
- University of Tabriz
- Tabriz
- Iran
| | - Maria Korabik
- Faculty of Chemistry
- University of Wroclaw
- Wroclaw 50-383
- Poland
| | - Marek Weselski
- Faculty of Chemistry
- University of Wroclaw
- Wroclaw 50-383
- Poland
| | - Mansoureh Zahedi
- Department of Inorganic Chemistry
- Faculty of Chemistry
- University of Tabriz
- Tabriz
- Iran
| | - Ulli Englert
- Institute of Inorganic Chemistry
- RWTH Aachen University
- 52074 Aachen
- Germany
| | - Rahman Bikas
- Department of Chemistry
- Faculty of Science
- Imam Khomeini International University
- Qazvin
- Iran
| | - Daria Szeliga
- Faculty of Chemistry
- University of Wroclaw
- Wroclaw 50-383
- Poland
| | - Marta Otręba
- Faculty of Chemistry
- University of Wroclaw
- Wroclaw 50-383
- Poland
| | - Tadeusz Lis
- Faculty of Chemistry
- University of Wroclaw
- Wroclaw 50-383
- Poland
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21
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Gautam R, Petritis SJ, Tomat E. Redox-Switchable Cyan Fluorescence of a BODIPY Analog Inspired by Propentdyopent Pigments. Eur J Inorg Chem 2018. [DOI: 10.1002/ejic.201800941] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/30/2023]
Affiliation(s)
- Ritika Gautam
- Department of Chemistry and Biochemistry; The University of Arizona; 1306 E. University Blvd. 85721 Tucson AZ USA
| | - Steven J. Petritis
- Department of Chemistry and Biochemistry; The University of Arizona; 1306 E. University Blvd. 85721 Tucson AZ USA
| | - Elisa Tomat
- Department of Chemistry and Biochemistry; The University of Arizona; 1306 E. University Blvd. 85721 Tucson AZ USA
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22
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Gautam R, Petritis SJ, Astashkin AV, Tomat E. Paramagnetism and Fluorescence of Zinc(II) Tripyrrindione: A Luminescent Radical Based on a Redox-Active Biopyrrin. Inorg Chem 2018; 57:15240-15246. [PMID: 30418755 DOI: 10.1021/acs.inorgchem.8b02532] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
The ability of bilins and other biopyrrins to form fluorescent zinc complexes has been known for more than a century; however, the exact identity of the emissive species remains uncertain in many cases. Herein, we characterize the hitherto elusive zinc complex of tripyrrin-1,14-dione, an analogue of several orange urinary pigments. As previously observed for its Pd(II), Cu(II), and Ni(II) complexes, tripyrrindione binds Zn(II) as a dianionic radical and forms a paramagnetic complex carrying an unpaired electron on the ligand π-system. This species is stable at room temperature and undergoes quasi-reversible ligand-based redox chemistry. Although the complex is isolated as a coordination dimer in the solid state, optical absorption and electron paramagnetic resonance spectroscopic studies indicate that the monomer is prevalent in a tetrahydrofuran solution. The paramagnetic Zn(II) tripyrrindione complex is brightly fluorescent (λabs = 599 nm, λem = 644 nm, ΦF = 0.23 in THF), and its study provides a molecular basis for the observation, made over several decades since the 1930s, of fluorescent behavior of tripyrrindione pigments in the presence of zinc salts. The zinc-bound tripyrrindione radical is thus a new addition to the limited number of stable radicals that are fluorescent at room temperature.
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Affiliation(s)
- Ritika Gautam
- Department of Chemistry and Biochemistry , The University of Arizona , Tucson , Arizona 85721 , United States
| | - Steven J Petritis
- Department of Chemistry and Biochemistry , The University of Arizona , Tucson , Arizona 85721 , United States
| | - Andrei V Astashkin
- Department of Chemistry and Biochemistry , The University of Arizona , Tucson , Arizona 85721 , United States
| | - Elisa Tomat
- Department of Chemistry and Biochemistry , The University of Arizona , Tucson , Arizona 85721 , United States
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23
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Ooi S, Shimizu D, Furukawa K, Tanaka T, Osuka A. Stable Face-to-Face Singlet Diradicaloids: Triply Linked Corrole Dimer Gallium(III) Complexes with Two μ
-Hydroxo-Bridges. Angew Chem Int Ed Engl 2018; 57:14916-14920. [DOI: 10.1002/anie.201810200] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/05/2018] [Indexed: 11/06/2022]
Affiliation(s)
- Shota Ooi
- Department of Chemistry; Graduate School of Science; Kyoto University; Sakyo-ku Kyoto 606-8502 Japan
| | - Daiki Shimizu
- Department of Chemistry; Graduate School of Science; Kyoto University; Sakyo-ku Kyoto 606-8502 Japan
| | - Ko Furukawa
- Center for Coordination of Research Facilities; Niigata University; Nishi-ku Niigata 950-2181 Japan
| | - Takayuki Tanaka
- Department of Chemistry; Graduate School of Science; Kyoto University; Sakyo-ku Kyoto 606-8502 Japan
| | - Atsuhiro Osuka
- Department of Chemistry; Graduate School of Science; Kyoto University; Sakyo-ku Kyoto 606-8502 Japan
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24
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Ooi S, Shimizu D, Furukawa K, Tanaka T, Osuka A. Stable Face-to-Face Singlet Diradicaloids: Triply Linked Corrole Dimer Gallium(III) Complexes with Two μ
-Hydroxo-Bridges. Angew Chem Int Ed Engl 2018. [DOI: 10.1002/ange.201810200] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
Affiliation(s)
- Shota Ooi
- Department of Chemistry; Graduate School of Science; Kyoto University; Sakyo-ku Kyoto 606-8502 Japan
| | - Daiki Shimizu
- Department of Chemistry; Graduate School of Science; Kyoto University; Sakyo-ku Kyoto 606-8502 Japan
| | - Ko Furukawa
- Center for Coordination of Research Facilities; Niigata University; Nishi-ku Niigata 950-2181 Japan
| | - Takayuki Tanaka
- Department of Chemistry; Graduate School of Science; Kyoto University; Sakyo-ku Kyoto 606-8502 Japan
| | - Atsuhiro Osuka
- Department of Chemistry; Graduate School of Science; Kyoto University; Sakyo-ku Kyoto 606-8502 Japan
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25
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Wang JF, Yao Y, Ning Y, Meng YS, Hou CL, Zhang J, Zhang JL. The design of rigid cyclic tripyrrins: the importance of intermolecular interactions on aggregation and luminescence. Org Chem Front 2018. [DOI: 10.1039/c8qo00313k] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Cyclic tripyrrin “locked” by a bridging benzyl moiety: enhancing the molecular rigidity and tuning aggregation and fluorescence via intermolecular halogen interactions.
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Affiliation(s)
- Jun-Fei Wang
- College of Materials Science and Optoelectronics Technology
- University of Chinese Academy of Sciences
- Beijing 100049
- P. R. China
| | - Yuhang Yao
- Beijing National Laboratory for Molecular Sciences
- State Key Laboratory of Rare Earth Materials Chemistry and Applications
- College of Chemistry and Molecular Engineering
- Peking University
- Beijing 100871
| | - Yingying Ning
- Beijing National Laboratory for Molecular Sciences
- State Key Laboratory of Rare Earth Materials Chemistry and Applications
- College of Chemistry and Molecular Engineering
- Peking University
- Beijing 100871
| | - Yin-Shan Meng
- Beijing National Laboratory for Molecular Sciences
- State Key Laboratory of Rare Earth Materials Chemistry and Applications
- College of Chemistry and Molecular Engineering
- Peking University
- Beijing 100871
| | - Chun-Liang Hou
- College of Materials Science and Optoelectronics Technology
- University of Chinese Academy of Sciences
- Beijing 100049
- P. R. China
| | - Jing Zhang
- College of Materials Science and Optoelectronics Technology
- University of Chinese Academy of Sciences
- Beijing 100049
- P. R. China
| | - Jun-Long Zhang
- Beijing National Laboratory for Molecular Sciences
- State Key Laboratory of Rare Earth Materials Chemistry and Applications
- College of Chemistry and Molecular Engineering
- Peking University
- Beijing 100871
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