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For: Makri N. Small Matrix Path Integral for System-Bath Dynamics. J Chem Theory Comput 2020;16:4038-4049. [DOI: 10.1021/acs.jctc.0c00039] [Citation(s) in RCA: 30] [Impact Index Per Article: 7.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Number Cited by Other Article(s)
1
Walters PL, Tsakanikas J, Wang F. An ensemble variational quantum algorithm for non-Markovian quantum dynamics. Phys Chem Chem Phys 2024. [PMID: 39034756 DOI: 10.1039/d4cp01669f] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 07/23/2024]
2
London N, Bu S, Johnson B, Ananth N. Mean-Field Ring Polymer Rates Using a Population Dividing Surface. J Phys Chem A 2024;128:5730-5739. [PMID: 38976564 DOI: 10.1021/acs.jpca.4c00005] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 07/10/2024]
3
Grimm RT, Eaves JD. Direct Numerical Solutions to Stochastic Differential Equations with Multiplicative Noise. PHYSICAL REVIEW LETTERS 2024;132:267101. [PMID: 38996310 DOI: 10.1103/physrevlett.132.267101] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/15/2023] [Accepted: 03/25/2024] [Indexed: 07/14/2024]
4
Makri N. Parsing the Influence Functional: Harmonic Bath Mapping and Anharmonic Small Matrix Path Integral. J Phys Chem Lett 2024;15:4616-4622. [PMID: 38640483 DOI: 10.1021/acs.jpclett.4c00908] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 04/21/2024]
5
Kang M, Nuomin H, Chowdhury SN, Yuly JL, Sun K, Whitlow J, Valdiviezo J, Zhang Z, Zhang P, Beratan DN, Brown KR. Seeking a quantum advantage with trapped-ion quantum simulations of condensed-phase chemical dynamics. Nat Rev Chem 2024;8:340-358. [PMID: 38641733 DOI: 10.1038/s41570-024-00595-1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 03/07/2024] [Indexed: 04/21/2024]
6
Bose A. Incorporation of Empirical Gain and Loss Mechanisms in Open Quantum Systems through Path Integral Lindblad Dynamics. J Phys Chem Lett 2024:3363-3368. [PMID: 38498435 DOI: 10.1021/acs.jpclett.4c00489] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/20/2024]
7
Makri N. Kink Sum for Long-Memory Small Matrix Path Integral Dynamics. J Phys Chem B 2024. [PMID: 38437738 DOI: 10.1021/acs.jpcb.3c08282] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/06/2024]
8
Seneviratne A, Walters PL, Wang F. Exact Non-Markovian Quantum Dynamics on the NISQ Device Using Kraus Operators. ACS OMEGA 2024;9:9666-9675. [PMID: 38434817 PMCID: PMC10906042 DOI: 10.1021/acsomega.3c09720] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 12/05/2023] [Revised: 01/18/2024] [Accepted: 01/23/2024] [Indexed: 03/05/2024]
9
Makri N. Path Integral over Equivalence Classes for Quantum Dynamics with Static Disorder. J Phys Chem Lett 2024;15:1462-1468. [PMID: 38294874 DOI: 10.1021/acs.jpclett.3c03555] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/01/2024]
10
Bose A. Quantum correlation functions through tensor network path integral. J Chem Phys 2023;159:214110. [PMID: 38051096 DOI: 10.1063/5.0174338] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/30/2023] [Accepted: 11/07/2023] [Indexed: 12/07/2023]  Open
11
Wang G, Cai Z. Real-Time Simulation of Open Quantum Spin Chains with the Inchworm Method. J Chem Theory Comput 2023. [PMID: 38039552 DOI: 10.1021/acs.jctc.3c00751] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/03/2023]
12
Bose A, Walters PL. Impact of Spatial Inhomogeneity on Excitation Energy Transport in the Fenna-Matthews-Olson Complex. J Phys Chem B 2023;127:7663-7673. [PMID: 37647510 DOI: 10.1021/acs.jpcb.3c03062] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 09/01/2023]
13
Bose A, Walters PL. Impact of Solvent on State-to-State Population Transport in Multistate Systems Using Coherences. J Chem Theory Comput 2023. [PMID: 37466459 DOI: 10.1021/acs.jctc.3c00200] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 07/20/2023]
14
Dani R, Kundu S, Makri N. Coherence Maps and Flow of Excitation Energy in the Bacterial Light Harvesting Complex 2. J Phys Chem Lett 2023;14:3835-3843. [PMID: 37067041 DOI: 10.1021/acs.jpclett.3c00670] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/19/2023]
15
Makri N. Topological aspects of system-bath Hamiltonians and a vector model for multisite systems coupled to local, correlated, or common baths. J Chem Phys 2023;158:144107. [PMID: 37061502 DOI: 10.1063/5.0147135] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 04/17/2023]  Open
16
Dani R, Makri N. Time-Evolving Quantum Superpositions in Open Systems and the Rich Content of Coherence Maps. J Phys Chem B 2022;126:9361-9375. [PMID: 36327150 DOI: 10.1021/acs.jpcb.2c05676] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
17
Kundu S, Dani R, Makri N. Tight inner ring architecture and quantum motion of nuclei enable efficient energy transfer in bacterial light harvesting. SCIENCE ADVANCES 2022;8:eadd0023. [PMID: 36288310 PMCID: PMC9604522 DOI: 10.1126/sciadv.add0023] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 05/13/2022] [Accepted: 09/08/2022] [Indexed: 06/16/2023]
18
Bose A, Walters PL. Effect of temperature gradient on quantum transport. Phys Chem Chem Phys 2022;24:22431-22436. [PMID: 36102915 DOI: 10.1039/d2cp03030f] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
19
Otterpohl F, Nalbach P, Thorwart M. Hidden Phase of the Spin-Boson Model. PHYSICAL REVIEW LETTERS 2022;129:120406. [PMID: 36179188 DOI: 10.1103/physrevlett.129.120406] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/28/2022] [Accepted: 09/07/2022] [Indexed: 06/16/2023]
20
Dani R, Makri N. Quantum State-to-State Rates for Multistate Processes from Coherences. J Phys Chem Lett 2022;13:8141-8149. [PMID: 36000919 DOI: 10.1021/acs.jpclett.2c02286] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/15/2023]
21
Kundu S, Dani R, Makri N. B800-to-B850 relaxation of excitation energy in bacterial light harvesting: All-state, all-mode path integral simulations. J Chem Phys 2022;157:015101. [DOI: 10.1063/5.0093828] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022]  Open
22
He X, Wu B, Shang Y, Li B, Cheng X, Liu J. New phase space formulations and quantum dynamics approaches. WIRES COMPUTATIONAL MOLECULAR SCIENCE 2022. [DOI: 10.1002/wcms.1619] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
23
Kundu S, Makri N. Small Matrix Quantum-Classical Path Integral. J Phys Chem Lett 2022;13:3492-3498. [PMID: 35416671 DOI: 10.1021/acs.jpclett.2c00668] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/14/2023]
24
Roy P, Kundu S, Valdiviezo J, Bullard G, Fletcher JT, Liu R, Yang SJ, Zhang P, Beratan DN, Therien MJ, Makri N, Fleming GR. Synthetic Control of Exciton Dynamics in Bioinspired Cofacial Porphyrin Dimers. J Am Chem Soc 2022;144:6298-6310. [PMID: 35353523 PMCID: PMC9011348 DOI: 10.1021/jacs.1c12889] [Citation(s) in RCA: 10] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/07/2021] [Indexed: 11/29/2022]
25
Kundu S, Makri N. Intramolecular Vibrations in Excitation Energy Transfer: Insights from Real-Time Path Integral Calculations. Annu Rev Phys Chem 2022;73:349-375. [PMID: 35081322 DOI: 10.1146/annurev-physchem-090419-120202] [Citation(s) in RCA: 20] [Impact Index Per Article: 10.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
26
Dani R, Makri N. Quantum quench and coherent-incoherent dynamics of Ising chains interacting with dissipative baths. J Chem Phys 2021;155:234705. [PMID: 34937374 DOI: 10.1063/5.0066891] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022]  Open
27
Makri N. Small Matrix Path Integral for Driven Dissipative Dynamics. J Phys Chem A 2021;125:10500-10506. [PMID: 34812645 DOI: 10.1021/acs.jpca.1c08230] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
28
Ye E, Chan GKL. Constructing tensor network influence functionals for general quantum dynamics. J Chem Phys 2021;155:044104. [PMID: 34340377 DOI: 10.1063/5.0047260] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022]  Open
29
Kundu S, Makri N. Time Evolution of Bath Properties in Spin-Boson Dynamics. J Phys Chem B 2021;125:8137-8151. [PMID: 34282911 DOI: 10.1021/acs.jpcb.1c03861] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
30
Makri N. Small Matrix Decomposition of Feynman Path Amplitudes. J Chem Theory Comput 2021;17:3825-3829. [DOI: 10.1021/acs.jctc.1c00339] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
31
Kundu S, Makri N. Origin of vibrational features in the excitation energy transfer dynamics of perylene bisimide J-aggregates. J Chem Phys 2021;154:114301. [DOI: 10.1063/5.0041514] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]  Open
32
Chatterjee S, Makri N. Density matrix and purity evolution in dissipative two-level systems: I. Theory and path integral results for tunneling dynamics. Phys Chem Chem Phys 2021;23:5113-5124. [PMID: 33623944 DOI: 10.1039/d0cp05527a] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/10/2023]
33
Chatterjee S, Makri N. Density matrix and purity evolution in dissipative two-level systems: II. Relaxation. Phys Chem Chem Phys 2021;23:5125-5133. [PMID: 33624643 DOI: 10.1039/d0cp05528j] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
34
Kundu S, Makri N. Electronic-vibrational density evolution in a perylene bisimide dimer: mechanistic insights into excitation energy transfer. Phys Chem Chem Phys 2021;23:15503-15514. [PMID: 34286768 DOI: 10.1039/d1cp02135d] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/02/2023]
35
Makri N. Small matrix modular path integral: iterative quantum dynamics in space and time. Phys Chem Chem Phys 2021;23:12537-12540. [PMID: 34042139 DOI: 10.1039/d1cp01483h] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
36
Makri N. Small Matrix Path Integral with Extended Memory. J Chem Theory Comput 2020;17:1-6. [DOI: 10.1021/acs.jctc.0c00987] [Citation(s) in RCA: 13] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
37
Chatterjee S, Makri N. Recovery of Purity in Dissipative Tunneling Dynamics. J Phys Chem Lett 2020;11:8592-8596. [PMID: 32976716 DOI: 10.1021/acs.jpclett.0c02513] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/11/2023]
38
Kundu S, Makri N. Modular path integral for finite-temperature dynamics of extended systems with intramolecular vibrations. J Chem Phys 2020;153:044124. [DOI: 10.1063/5.0014838] [Citation(s) in RCA: 12] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/19/2023]  Open
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