1
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Foroutan M, Boudaghi A, Alibalazadeh M. Fullerenes containing water molecules: a study of reactive molecular dynamics simulations. Phys Chem Chem Phys 2023; 25:32493-32502. [PMID: 37997178 DOI: 10.1039/d3cp04420c] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2023]
Abstract
A different technique was used to investigate fullerenes encapsulating a polar guest species. By reactive molecular dynamics simulations, three types of fullerenes were investigated on a gold surface: an empty C60, a single H2O molecule inside C60 (H2O@C60), and two water molecules inside C60 ((H2O)2@C60). Our findings revealed that despite the free movement of all fullerenes on gold surfaces, confined H2O molecules within the fullerenes result in a distinct pattern of motion in these systems. The (H2O)2@C60 complex had the highest displacement and average velocity, while C60 had the lowest displacement and average velocity. The symmetry of molecules and the polarity of water seem to be crucial in these cases. ReaxFF simulations showed that water molecules in an H2O molecule, H2O@C60, and (H2O)2@C60 have dipole moments of 1.76, 0.42, and 0.47 D, respectively. A combination of the non-polar C60 and polar water demonstrated a significant reduction in the dipole moment of H2O molecules due to encapsulation. The dipole moments of water molecules agreed with those in other studies, which can be useful in the development of biocompatible and high-efficiency nanocars.
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Affiliation(s)
- Masumeh Foroutan
- Department of Physical Chemistry, School of Chemistry, College of Science, University of Tehran, Tehran, Iran.
| | - Ahmad Boudaghi
- Department of Physical Chemistry, School of Chemistry, College of Science, University of Tehran, Tehran, Iran.
| | - Mahtab Alibalazadeh
- Department of Physical Chemistry, School of Chemistry, College of Science, University of Tehran, Tehran, Iran.
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2
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Ando H, Nakao Y. Localization of nuclear wave functions of lithium in [Li +@C 60]PF 6-: molecular insights into two-site disorder-order transition. Phys Chem Chem Phys 2023; 25:8446-8462. [PMID: 36917209 DOI: 10.1039/d2cp05835a] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/06/2023]
Abstract
Lithium endohedral fullerene, Li+@C60, is a porous system ideal for studying the quantized translational motion of the Li+ nucleus under subnanoscale confinement. The quantized nuclear motion strongly depends on the anharmonic and polarizable adsorbent potential within the C60 cage, which can be perturbed by cage distortion and/or exterior ions. In our recent paper, H. Ando and Y. Nakao, Phys. Chem. Chem. Phys., 2021, 23, 9785-9803, we focused on a [Li+@C60]PF6- salt and theoretically investigated how the Li+ ion in each C60 cage is simultaneously localized at two equivalent disordered sites in 24 K < T ≪ 100 K. At 24 K, the salt exhibits a disorder-order transition, whereby every Li+ ion becomes mostly localized at one of the two disordered sites below that temperature. Herein we discuss the origin of this transition with special attention to the local structural distortion and intermolecular interactions. Using the Fourier grid Hamiltonian method and a model function that fits a post-Hartree-Fock potential energy surface, we obtained hundreds of low-energy nuclear wave functions of Li+ confined within the cage. The weak distortions of the C60 cage and the PF6- coordination sphere below 24 K and concurrent inversion-symmetry breaking affect intermolecular interactions, thus making the wave functions of the nuclear ground state and several low-energy excited states localized around the experimental high-occupancy disordered site. This demonstrates that the distortions correlate closely with the two-site disorder-order transition. Finally, we reveal that two absorption peaks in the terahertz frequency range show substantial blueshifts upon cooling below 24 K, which serve as fingerprints of the transition.
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Affiliation(s)
- Hideo Ando
- Faculty of Science, Yamagata University, 1-4-12 Kojirakawa-machi, Yamagata, Yamagata 990-8560, Japan.
| | - Yoshihide Nakao
- Faculty of Life Science, Kyushu Sangyo University, 2-3-1 Matsukadai, Higashi-ku, Fukuoka 813-8503, Japan
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3
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Chen A, Benoit DM, Scribano Y, Nauts A, Lauvergnat D. Smolyak Algorithm Adapted to a System-Bath Separation: Application to an Encapsulated Molecule with Large-Amplitude Motions. J Chem Theory Comput 2022; 18:4366-4372. [PMID: 35584357 DOI: 10.1021/acs.jctc.2c00108] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
A Smolyak algorithm adapted to system-bath separation is proposed for rigorous quantum simulations. This technique combines a sparse grid method with the system-bath concept in a specific configuration without limitations on the form of the Hamiltonian, thus achieving a highly efficient convergence of the excitation transitions for the "system" part. Our approach provides a general way to overcome the perennial convergence problem for the standard Smolyak algorithm and enables the simulation of floppy molecules with more than a hundred degrees of freedom. The efficiency of the present method is illustrated on the simulation of H2 caged in an sII clathrate hydrate including two kinds of cage modes. The transition energies are converged by increasing the number of normal modes of water molecules. Our results confirm the triplet splittings of both translational and rotational (j = 1) transitions of the H2 molecule. Furthermore, they show a slight increase of the translational transitions with respect to the ones in a rigid cage.
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Affiliation(s)
- Ahai Chen
- Maison de la Simulation, UVSQ, CNRS, CEA, Université Paris-Saclay, 91191 Gif-sur-Yvette, France.,Institut de Chimie Physique, UMR-CNRS 8000, Université Paris-Saclay, CNRS, 91405 Orsay, France
| | - David M Benoit
- E.A. Milne Centre for Astrophysics, The University of Hull, Cottingham Road, Kingston upon Hull HU6 7RX, U.K
| | - Yohann Scribano
- Laboratoire Univers et Particules de Montpellier, UMR-CNRS 5299, Université de Montpellier, 34095 Montpellier Cedex, France
| | - André Nauts
- Institut de Chimie Physique, UMR-CNRS 8000, Université Paris-Saclay, CNRS, 91405 Orsay, France.,Institute of Condensed Matter and Nanosciences (NAPS), Université Catholique de Louvain, 1348 Louvain-la-Neuve, Belgium
| | - David Lauvergnat
- Institut de Chimie Physique, UMR-CNRS 8000, Université Paris-Saclay, CNRS, 91405 Orsay, France
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4
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Xu M, Felker PM, Bačić Z. H 2O inside the fullerene C 60: Inelastic neutron scattering spectrum from rigorous quantum calculations. J Chem Phys 2022; 156:124101. [PMID: 35364860 DOI: 10.1063/5.0086842] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
We present a methodology that, for the first time, allows rigorous quantum calculation of the inelastic neutron scattering (INS) spectra of a triatomic molecule in a nanoscale cavity, in this case, H2O inside the fullerene C60. Both moieties are taken to be rigid. Our treatment incorporates the quantum six-dimensional translation-rotation (TR) wave functions of the encapsulated H2O, which serve as the spatial parts of the initial and final states of the INS transitions. As a result, the simulated INS spectra reflect the coupled TR dynamics of the nanoconfined guest molecule. They also exhibit the features arising from symmetry breaking observed for solid H2O@C60 at low temperatures. Utilizing this methodology, we compute the INS spectra of H2O@C60 for two incident neutron wavelengths and compare them with the corresponding experimental spectra. Good overall agreement is found, and the calculated spectra provide valuable additional insights.
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Affiliation(s)
- Minzhong Xu
- Department of Chemistry, New York University, New York, New York 10003, USA
| | - Peter M Felker
- Department of Chemistry and Biochemistry, University of California, Los Angeles, California 90095-1569, USA
| | - Zlatko Bačić
- Department of Chemistry, New York University, New York, New York 10003, USA
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5
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Carrillo-Bohórquez O, Valdés Á, Prosmiti R. Unraveling the Origin of Symmetry Breaking in H 2 O@C 60 Endofullerene Through Quantum Computations. Chemphyschem 2022; 23:e202200034. [PMID: 35289042 PMCID: PMC9311847 DOI: 10.1002/cphc.202200034] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/17/2022] [Revised: 02/01/2022] [Indexed: 11/09/2022]
Abstract
We explore the origin of the anomalous splitting of the 101 levels reported experimentally for the H2O@C60 endofullerene, in order to give some insight about the physical interpretations of the symmetry breaking observed. We performed fully‐coupled quantum computations within the multiconfiguration time‐dependent Hartree approach employing a rigorous procedure to handle such computationally challenging problems. We introduce two competing physical models, and discuss the observed unconventional quantum patterns in terms of anisotropy in the interfullerene interactions, caused by the change in the off‐center position of the encapsulated water molecules inside the cage or the uniaxial C60‐cage distortion, arising from noncovalent bonding upon water's encapsulation, or exohedral fullerene perturbations. Our results show that both scenarios could reproduce the experimentally observed rotational degeneracy pattern, although quantitative agreement with the available experimental rotational levels splitting value has been achieved by the model that considers an uniaxial elongation of the C60‐cage. Such finding supports that the observed symmetry breaking could be mainly caused by the distortion of the fullerene cage. However, as nuclear quantum treatments rely on the underlying interactions, a decisive conclusion hinges on the availability of their improved description, taken into account both endofullerene and exohedral environments, from forthcoming highly demanding electronic structure many‐body interaction studies.
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Affiliation(s)
- Orlando Carrillo-Bohórquez
- Institute of Fundamental Physics (IFF-CSIC), CSIC, Serrano 123, 28006, Madrid, Spain.,Departamento de Física, Universidad Nacional de Colombia, Calle 26, Cra 39, Edificio 404, Bogotá, Colombia
| | - Álvaro Valdés
- Escuela de Física, Universidad Nacional de Colombia, Sede Medellín, A. A. 3840, Medellín, Colombia
| | - Rita Prosmiti
- Institute of Fundamental Physics (IFF-CSIC), CSIC, Serrano 123, 28006, Madrid, Spain
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6
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Wespiser C, Putaud T, Kalugina YN, Soldera A, Roy PN, Michaut X, Ayotte P. Ro-translational dynamics of confined water: I - The confined asymmetric rotor model. J Chem Phys 2022; 156:074304. [DOI: 10.1063/5.0079565] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Affiliation(s)
| | - Thomas Putaud
- Universite de Sherbrooke Departement de chimie, Canada
| | | | - Armand Soldera
- Department of Chemistry, Universite de Sherbrooke, Canada
| | - Pierre-Nicholas Roy
- Department of Chemistry, University of Waterloo Department of Chemistry, Canada
| | | | - Patrick Ayotte
- Département de Chimie, Universite de Sherbrooke Departement de chimie, Canada
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7
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Felker PM, Bačić Z. Noncovalently bound molecular complexes beyond diatom–diatom systems: full-dimensional, fully coupled quantum calculations of rovibrational states. Phys Chem Chem Phys 2022; 24:24655-24676. [DOI: 10.1039/d2cp04005k] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
Abstract
The methodological advances made in recent years have significantly extended the range and dimensionality of noncovalently bound molecular complexes for which full-dimensional quantum calculations of their rovibrational states are feasible.
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Affiliation(s)
- Peter M. Felker
- Department of Chemistry and Biochemistry, University of California, Los Angeles, CA 90095-1569, USA
| | - Zlatko Bačić
- Department of Chemistry, New York University, New York, NY, 10003, USA
- Simons Center for Computational Physical Chemistry at New York University, USA
- NYU-ECNU Center for Computational Chemistry at NYU Shanghai, 3663 Zhongshan Road North, Shanghai, 200062, China
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8
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Dolgonos GA. Exploring the Properties of H
2
O@C
60
with the Local Second‐Order Møller‐Plesset Perturbation Theory: Blue or Red Shift in C
60
and H
2
O Fundamentals to Expect? ChemistrySelect 2021. [DOI: 10.1002/slct.202103004] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Affiliation(s)
- Grygoriy A. Dolgonos
- Institute of Chemistry University of Graz Heinrichstrasse 28/IV A-8010 Graz Austria
- Life Chemicals Inc. Murmanska Str. 5 02660 Kyiv Ukraine
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9
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Carrillo-Bohórquez O, Valdés Á, Prosmiti R. Encapsulation of a Water Molecule inside C 60 Fullerene: The Impact of Confinement on Quantum Features. J Chem Theory Comput 2021; 17:5839-5848. [PMID: 34420292 PMCID: PMC8444341 DOI: 10.1021/acs.jctc.1c00662] [Citation(s) in RCA: 11] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
![]()
We introduce an efficient
quantum fully coupled computational scheme
within the multiconfiguration time-dependent Hartree (MCTDH) approach
to handle the otherwise extremely costly computations of translational–rotational–vibrational
states and energies of light-molecule endofullenes. Quantum calculations
on energy levels are reported for a water molecule inside C60 fullerene by means of such a systematic approach that includes all
nine degrees of freedom of H2O@C60 and does
not consider restrictions above them. The potential energy operator
is represented as a sum of natural potentials employing the n-mode expansion, along with the exact kinetic energy operator,
by introducing a set of Radau internal coordinates for the H2O molecule. On the basis of the present rigorous computations, various
aspects of the quantized intermolecular dynamics upon confinement
of H2O@C60 are discussed, such as the rotational
energy level splitting and the significant frequency shifts of the
encapsulated water molecule vibrations. The impact of water encapsulation
on quantum features is explored, and insights into the nature of the
underlying forces are provided, highlighting the importance of a reliable
first-principles description of the guest–host interactions.
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Affiliation(s)
- Orlando Carrillo-Bohórquez
- Departamento de Física, Universidad Nacional de Colombia, Calle 26, Cra 39, 404 Edificio, Bogotá, Colombia.,Institute of Fundamental Physics (IFF-CSIC), CSIC, Serrano 123, 28006 Madrid, Spain
| | - Álvaro Valdés
- Escuela de Física, Universidad Nacional de Colombia, Sede Medellín, A. A 3840 Medellín, Colombia
| | - Rita Prosmiti
- Institute of Fundamental Physics (IFF-CSIC), CSIC, Serrano 123, 28006 Madrid, Spain
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10
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Zhukov SS, Balos V, Hoffman G, Alom S, Belyanchikov M, Nebioglu M, Roh S, Pronin A, Bacanu GR, Abramov P, Wolf M, Dressel M, Levitt MH, Whitby RJ, Gorshunov B, Sajadi M. Rotational coherence of encapsulated ortho and para water in fullerene-C 60 revealed by time-domain terahertz spectroscopy. Sci Rep 2020; 10:18329. [PMID: 33110105 PMCID: PMC7592058 DOI: 10.1038/s41598-020-74972-3] [Citation(s) in RCA: 12] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/06/2020] [Accepted: 10/06/2020] [Indexed: 11/15/2022] Open
Abstract
We resolve the real-time coherent rotational motion of isolated water molecules encapsulated in fullerene-C60 cages by time-domain terahertz (THz) spectroscopy. We employ single-cycle THz pulses to excite the low-frequency rotational motion of water and measure the subsequent coherent emission of electromagnetic waves by water molecules. At temperatures below ~ 100 K, C60 lattice vibrational damping is mitigated and the quantum dynamics of confined water are resolved with a markedly long rotational coherence, extended beyond 10 ps. The observed rotational transitions agree well with low-frequency rotational dynamics of single water molecules in the gas phase. However, some additional spectral features with their major contribution at ~2.26 THz are also observed which may indicate interaction between water rotation and the C60 lattice phonons. We also resolve the real-time change of the emission pattern of water after a sudden cooling to 4 K, signifying the conversion of ortho-water to para-water over the course of 10s hours. The observed long coherent rotational dynamics of isolated water molecules confined in C60 makes this system an attractive candidate for future quantum technology.
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Affiliation(s)
| | | | | | - Shamim Alom
- School of Chemistry, University of Southampton, Southampton, UK
| | | | - Mehmet Nebioglu
- 1. Physikalisches Institut, Universität Stuttgart, Stuttgart, Germany
| | - Seulki Roh
- 1. Physikalisches Institut, Universität Stuttgart, Stuttgart, Germany
| | - Artem Pronin
- 1. Physikalisches Institut, Universität Stuttgart, Stuttgart, Germany
| | - George R Bacanu
- School of Chemistry, University of Southampton, Southampton, UK
| | - Pavel Abramov
- Moscow Institute of Physics and Technology, Moscow, Russia
| | - Martin Wolf
- Fritz-Haber-Institut der MPG, Berlin, Germany
| | - Martin Dressel
- Moscow Institute of Physics and Technology, Moscow, Russia
- 1. Physikalisches Institut, Universität Stuttgart, Stuttgart, Germany
| | | | | | | | - Mohsen Sajadi
- Fritz-Haber-Institut der MPG, Berlin, Germany.
- Department of Chemistry, University of Paderborn, Paderborn, Germany.
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11
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Felker PM, Bačić Z. Flexible water molecule in C60: Intramolecular vibrational frequencies and translation-rotation eigenstates from fully coupled nine-dimensional quantum calculations with small basis sets. J Chem Phys 2020; 152:014108. [DOI: 10.1063/1.5138992] [Citation(s) in RCA: 19] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/01/2023] Open
Affiliation(s)
- Peter M. Felker
- Department of Chemistry and Biochemistry, University of California, Los Angeles, California 90095-1569, USA
| | - Zlatko Bačić
- Department of Chemistry, New York University, New York, New York 10003, USA
- NYU-ECNU Center for Computational Chemistry at NYU Shanghai, 3663 Zhongshan Road North, Shanghai 200062, China
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