1
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Yeh CN, Morales MA. Low-Scaling Algorithms for GW and Constrained Random Phase Approximation Using Symmetry-Adapted Interpolative Separable Density Fitting. J Chem Theory Comput 2024; 20:3184-3198. [PMID: 38597496 DOI: 10.1021/acs.jctc.4c00085] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 04/11/2024]
Abstract
We present low-scaling algorithms for GW and constrained random phase approximation based on a symmetry-adapted interpolative separable density fitting (ISDF) procedure that incorporates the space-group symmetries of crystalline systems. The resulting formulations scale cubically, with respect to system size, and linearly with the number of k-points, regardless of the choice of single-particle basis and whether a quasiparticle approximation is employed. We validate these methods through comparisons with published literature and demonstrate their efficiency in treating large-scale systems through the construction of downfolded many-body Hamiltonians for carbon dimer defects embedded in hexagonal boron nitride supercells. Our work highlights the efficiency and general applicability of ISDF in the context of large-scale many-body calculations with k-point sampling beyond density functional theory.
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Affiliation(s)
- Chia-Nan Yeh
- Center for Computational Quantum Physics, Flatiron Institute, New York, New York 10010, United States
| | - Miguel A Morales
- Center for Computational Quantum Physics, Flatiron Institute, New York, New York 10010, United States
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2
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Zhang Z, Yin X, Hu W, Yang J. Machine Learning K-Means Clustering of Interpolative Separable Density Fitting Algorithm for Accurate and Efficient Cubic-Scaling Exact Exchange Plus Random Phase Approximation within Plane Waves. J Chem Theory Comput 2024; 20:1944-1961. [PMID: 38361423 DOI: 10.1021/acs.jctc.3c01157] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/17/2024]
Abstract
The exact-exchange plus random-phase approximation (EXX+RPA) method has emerged as a crucial tool for precisely characterizing electronic structures in molecular and solid systems. We present an accurate and efficient implementation of EXX+RPA calculations that scale cubically and are conducted within plane waves. Our approach incorporates the interpolative separable density fitting (ISDF) algorithm, effectively mitigating the computational challenges associated with the plane wave basis set. To overcome the constraints of the conventional ISDF algorithm, characterized by the exceptionally high prefactor in QR factorization for interpolation point selection, we introduce an enhanced machine learning K-means method. This method incorporates a novel empirical weight function called "SSM+" for more precise interpolation point selection, capturing physical information more accurately across diverse systems. Our machine learning approach offers a quasiquadratic scaling alternative, effectively replacing the computationally demanding cubic-scaling QRCP algorithm in plane-wave-based EXX+RPA calculations. Furthermore, we enhance the method's capabilities by optimizing GPU acceleration using MATLAB's integrated GPU toolkit. In particular, our approach reduces the computational scaling of χ0 from 3.80 to 2.13 and the overall computational scaling of EXX from 2.74 to 2.10. We achieve a remarkable GPU acceleration speedup of up to 35×. Regarding CPU computation time, the standard quartic-scaling method requires 22 h to compute Si128, while QRCP completes the calculation in only around 1 h, achieving a speedup up to 20×. However, the utilization of the K-means algorithm reduces the time to 800 s, a substantial improvement of 100× compared to the standard algorithm. By employing the K-means algorithm, the computational time for interpolative point calculation using QRCP decreases from 1 h to 1 min, resulting in a 55× speed increase. With this improved algorithm, we successfully computed the dissociation curve of H2 and the equilibrium polyynic geometry of C18 molecules.
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Affiliation(s)
- Zhenlin Zhang
- Key Laboratory of Precision and Intelligent Chemistry, Department of Chemical Physics, and Anhui Center for Applied Mathematics, University of Science and Technology of China, Hefei, Anhui 230026, China
| | - Xilin Yin
- Key Laboratory of Precision and Intelligent Chemistry, Department of Chemical Physics, and Anhui Center for Applied Mathematics, University of Science and Technology of China, Hefei, Anhui 230026, China
| | - Wei Hu
- Key Laboratory of Precision and Intelligent Chemistry, Department of Chemical Physics, and Anhui Center for Applied Mathematics, University of Science and Technology of China, Hefei, Anhui 230026, China
| | - Jinlong Yang
- Key Laboratory of Precision and Intelligent Chemistry, Department of Chemical Physics, and Anhui Center for Applied Mathematics, University of Science and Technology of China, Hefei, Anhui 230026, China
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3
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Li J, Yang L, Wan L, Hu W, Yang J. Machine Learning K-Means Clustering in Interpolative Separable Density Fitting Algorithm: Advancing Accurate and Efficient Cubic-Scaling Density Functional Perturbation Theory Calculations within Plane Waves. J Phys Chem A 2024. [PMID: 38439159 DOI: 10.1021/acs.jpca.3c07159] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/06/2024]
Abstract
Density functional perturbation theory (DFPT) is a crucial tool for accurately describing lattice dynamics. The adaptively compressed polarizability (ACP) method reduces the computational complexity of DFPT calculations from O(N4) to O(N3) by combining the interpolative separable density fitting (ISDF) algorithm. However, the conventional QR factorization with column pivoting (QRCP) algorithm, used for selecting the interpolation points in ISDF, not only incurs a high cubic-scaling computational cost, O(N3), but also leads to suboptimal convergence. This convergence issue is particularly pronounced when considering the complex interplay between the external potential and atomic displacement in ACP-based DFPT calculations. Here, we present a machine learning K-means clustering algorithm to select the interpolation points in ISDF, which offers a more efficient quadratic-scaling O(N2) alternative to the computationally intensive cubic-scaling O(N3) QRCP algorithm. We implement this efficient K-means-based ISDF algorithm to accelerate plane-wave DFPT calculations in KSSOLV, which is a MATLAB toolbox for performing Kohn-Sham density functional theory calculations within plane waves. We demonstrate that this K-means algorithm not only offers comparable accuracy to QRCP in ISDF but also achieves better convergence for ACP-based DFPT calculations. In particular, K-means can remarkably reduce the computational cost of selecting the interpolation points by nearly 2 orders of magnitude compared to QRCP in ISDF.
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Affiliation(s)
- Jielan Li
- Key Laboratory of Precision and Intelligent Chemistry, Department of Chemical Physics and Anhui Center for Applied Mathematics, University of Science and Technology of China, Hefei, Anhui 230026, China
| | - Liu Yang
- Key Laboratory of Precision and Intelligent Chemistry, Department of Chemical Physics and Anhui Center for Applied Mathematics, University of Science and Technology of China, Hefei, Anhui 230026, China
| | - Lingyun Wan
- Key Laboratory of Precision and Intelligent Chemistry, Department of Chemical Physics and Anhui Center for Applied Mathematics, University of Science and Technology of China, Hefei, Anhui 230026, China
| | - Wei Hu
- Key Laboratory of Precision and Intelligent Chemistry, Department of Chemical Physics and Anhui Center for Applied Mathematics, University of Science and Technology of China, Hefei, Anhui 230026, China
| | - Jinlong Yang
- Key Laboratory of Precision and Intelligent Chemistry, Department of Chemical Physics and Anhui Center for Applied Mathematics, University of Science and Technology of China, Hefei, Anhui 230026, China
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4
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Jiao S, Li J, Qin X, Wan L, Hu W, Yang J. Complex-Valued K-Means Clustering of Interpolative Separable Density Fitting Algorithm for Large-Scale Hybrid Functional Enabled Ab Initio Molecular Dynamics Simulations within Plane Waves. J Phys Chem A 2024. [PMID: 38430107 DOI: 10.1021/acs.jpca.3c07172] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/03/2024]
Abstract
K-means clustering, as a classic unsupervised machine learning algorithm, is the key step to select the interpolation sampling points in interpolative separable density fitting (ISDF) decomposition for hybrid functional electronic structure calculations. Real-valued K-means clustering for accelerating the ISDF decomposition has been demonstrated for large-scale hybrid functional enabled ab initio molecular dynamics (hybrid AIMD) simulations within plane-wave basis sets where the Kohn-Sham orbitals are real-valued. However, it is unclear whether such K-means clustering works for complex-valued Kohn-Sham orbitals. Here, we propose an improved weight function defined as the sum of the square modulus of complex-valued Kohn-Sham orbitals in K-means clustering for hybrid AIMD simulations. Numerical results demonstrate that the K-means algorithm with a new weight function yields smoother and more delocalized interpolation sampling points, resulting in smoother energy potential, smaller energy drift, and longer time steps for hybrid AIMD simulations compared to the previous weight function used in the real-valued K-means algorithm. In particular, we find that this improved algorithm can obtain more accurate oxygen-oxygen radial distribution functions in liquid water molecules and a more accurate power spectrum in crystal silicon dioxide compared to the previous K-means algorithm. Finally, we describe a massively parallel implementation of this ISDF decomposition to accelerate large-scale complex-valued hybrid AIMD simulations containing thousands of atoms (2,744 atoms), which can scale up to 5,504 CPU cores on modern supercomputers.
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Affiliation(s)
- Shizhe Jiao
- Hefei National Research Center for Physical Sciences at the Microscale, and Anhui Center for Applied Mathematics, University of Science and Technology of China, Hefei, Anhui 230026, China
| | - Jielan Li
- Hefei National Research Center for Physical Sciences at the Microscale, and Anhui Center for Applied Mathematics, University of Science and Technology of China, Hefei, Anhui 230026, China
| | - Xinming Qin
- Hefei National Research Center for Physical Sciences at the Microscale, and Anhui Center for Applied Mathematics, University of Science and Technology of China, Hefei, Anhui 230026, China
| | - Lingyun Wan
- Hefei National Research Center for Physical Sciences at the Microscale, and Anhui Center for Applied Mathematics, University of Science and Technology of China, Hefei, Anhui 230026, China
| | - Wei Hu
- Hefei National Research Center for Physical Sciences at the Microscale, and Anhui Center for Applied Mathematics, University of Science and Technology of China, Hefei, Anhui 230026, China
| | - Jinlong Yang
- Key Laboratory of Precision and Intelligent Chemistry, and Department of Chemical Physics, University of Science and Technology of China, Hefei, Anhui 230026, China
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5
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Datar A, Matthews DA. Robust Tensor Hypercontraction of the Particle-Particle Ladder Term in Equation-of-Motion Coupled Cluster Theory. J Chem Theory Comput 2024; 20:708-720. [PMID: 38198505 DOI: 10.1021/acs.jctc.3c00892] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/12/2024]
Abstract
One method of representing a high-rank tensor as a (hyper-)product of lower-rank tensors is the tensor hypercontraction (THC) method of Hohenstein et al. This strategy has been found to be useful for reducing the polynomial scaling of coupled-cluster methods by representation of a four-dimensional tensor of electron-repulsion integrals in terms of five two-dimensional matrices. Pierce et al. have already shown that the application of a robust form of THC to the particle-particle ladder (PPL) term reduces the cost of this term in couple-cluster singles and doubles (CCSD) from O ( N 6 ) to O ( N 5 ) with negligible errors in energy with respect to the density-fitted variant. In this work, we have implemented the least-squares variant of THC (LS-THC) which does not require a nonlinear tensor factorization, including the robust form (R-LS-THC), for the calculation of the excitation and electron attachment energies using equation-of-motion coupled cluster methods EOMEE-CCSD and EOMEA-CCSD, respectively. We have benchmarked the effect of the R-LS-THC-PPL approximation on excitation energies using the comprehensive QUEST database and the accuracy of electron attachment energies using the NAB22 database. We find that errors on the order of 1 meV are achievable with a reduction in total calculation time of approximately 5 ×.
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Affiliation(s)
- Avdhoot Datar
- Department of Chemistry, Southern Methodist University, Dallas, Texas 75275, United States
| | - Devin A Matthews
- Department of Chemistry, Southern Methodist University, Dallas, Texas 75275, United States
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6
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Delesma FA, Leucke M, Golze D, Rinke P. Benchmarking the accuracy of the separable resolution of the identity approach for correlated methods in the numeric atom-centered orbitals framework. J Chem Phys 2024; 160:024118. [PMID: 38205851 DOI: 10.1063/5.0184406] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/25/2023] [Accepted: 12/19/2023] [Indexed: 01/12/2024] Open
Abstract
Four-center two-electron Coulomb integrals routinely appear in electronic structure algorithms. The resolution-of-the-identity (RI) is a popular technique to reduce the computational cost for the numerical evaluation of these integrals in localized basis-sets codes. Recently, Duchemin and Blase proposed a separable RI scheme [J. Chem. Phys. 150, 174120 (2019)], which preserves the accuracy of the standard global RI method with the Coulomb metric and permits the formulation of cubic-scaling random phase approximation (RPA) and GW approaches. Here, we present the implementation of a separable RI scheme within an all-electron numeric atom-centered orbital framework. We present comprehensive benchmark results using the Thiel and the GW100 test set. Our benchmarks include atomization energies from Hartree-Fock, second-order Møller-Plesset (MP2), coupled-cluster singles and doubles, RPA, and renormalized second-order perturbation theory, as well as quasiparticle energies from GW. We found that the separable RI approach reproduces RI-free HF calculations within 9 meV and MP2 calculations within 1 meV. We have confirmed that the separable RI error is independent of the system size by including disordered carbon clusters up to 116 atoms in our benchmarks.
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Affiliation(s)
| | - Moritz Leucke
- Faculty for Chemistry and Food Chemistry, Technische Universität Dresden, 01062 Dresden, Germany
| | - Dorothea Golze
- Faculty for Chemistry and Food Chemistry, Technische Universität Dresden, 01062 Dresden, Germany
| | - Patrick Rinke
- Department of Applied Physics, Aalto University, FI-02150 Espoo, Finland
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7
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Ganoe B, Head-Gordon M. Doubles Connected Moments Expansion: A Tractable Approximate Horn-Weinstein Approach for Quantum Chemistry. J Chem Theory Comput 2023; 19:9187-9201. [PMID: 38051773 PMCID: PMC10753800 DOI: 10.1021/acs.jctc.3c00929] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/24/2023] [Revised: 11/03/2023] [Accepted: 11/06/2023] [Indexed: 12/07/2023]
Abstract
Ab initio methods based on the second-order and higher connected moments, or cumulants, of a reference function have seen limited use in the determination of correlation energies of chemical systems over the years. Moment-based methods have remained unattractive relative to more ubiquitous methods, such as perturbation theory and coupled cluster theory, due in part to the intractable cost of assembling moments of high-order and poor performance of low-order expansions. Many of the traditional quantum chemical methodologies can be recast as a selective summation of perturbative contributions to their energy; using this familiar structure as a guide in selecting terms, we develop a scheme to approximate connected moments limited to double excitations. The tractable Doubles Connected Moments [DCM(N)] approximation is developed and tested against a multitude of common single-reference methods to determine its efficacy in the determination of the correlation energy of model systems and small molecules. The DCM(N) sequence of energies exhibits smooth convergence toward limiting values in the range of N = 11-14, with compute costs that scale as a noniterative O(M6) with molecule size, M. Numerical tests on correlation energy recovery for 55 small molecules comprising the G1 test set in the cc-pVDZ basis show that DCM(N) strongly outperforms MP2 and even CCD with a Hartree-Fock reference. When using an approximate Brueckner reference from orbital-optimized (oo) MP2, the resulting oo:DCM(N) energies converge to values more accurate than CCSD for 49 of 55 molecules. The qualitative success of the method in regions where strong correlation effects begin to dominate, even while maintaining spin purity, suggests this may be a good starting point in the development of methodologies for the description of strongly correlated or spin-contaminated systems while maintaining a tractable single-reference formalism.
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Affiliation(s)
- Brad Ganoe
- Pitzer Center for Theoretical Chemistry,
Department of Chemistry, University of California, Berkeley, California 94720, United States
| | - Martin Head-Gordon
- Pitzer Center for Theoretical Chemistry,
Department of Chemistry, University of California, Berkeley, California 94720, United States
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8
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Wang Z, Aldossary A, Shi T, Liu Y, Li XS, Head-Gordon M. Local Second-Order Møller-Plesset Theory with a Single Threshold Using Orthogonal Virtual Orbitals: Theory, Implementation, and Assessment. J Chem Theory Comput 2023; 19:7577-7591. [PMID: 37877899 DOI: 10.1021/acs.jctc.3c00744] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/26/2023]
Abstract
It has long been clear that electron correlation methods exhibit unphysical compute scalings with molecular size, which has motivated the development of local correlation methods to discard effectively zero contributions in a controlled way to yield an approximate correlation energy. The ideal local correlation method should have a single numerical threshold that controls the dropping of terms with the ability to have that threshold set small enough so that the correlation energy is reproduced to enough significant figures such that the result is chemically identical. This work reports such a method for the second-order Møller-Plesset (MP2) theory. The theory, implementation, and testing of this local MP2 theory are reported. Thresholds ranging from 10-5 to 10-8 and basis sets ranging from split valence plus polarization through to quadruple-ζ are assessed for local MP2 calculations on a range of molecules, including linear chains and molecules with two- and three-dimensional character. The implementation is shared memory parallel via OpenMP and yields roughly 50% parallel efficiency with 16 cores for a large job. Considerable efforts were made to minimize memory demands, which increased as thresholds were tightened. A variety of relative energy calculations are presented as a function of threshold to provide some guidance to users on how to obtain adequate precision at a low compute cost. It is particularly clear that derivative properties require tighter thresholds in order to achieve an adequate precision.
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Affiliation(s)
- Zhenling Wang
- Department of Chemistry, University of California, Berkeley, California 94720, United States
- Chemical Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720, United States
| | - Abdulrahman Aldossary
- Department of Chemistry, University of California, Berkeley, California 94720, United States
| | - Tianyi Shi
- Applied Mathematics and Computational Research Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720, United States
| | - Yang Liu
- Applied Mathematics and Computational Research Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720, United States
| | - Xiaoye S Li
- Applied Mathematics and Computational Research Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720, United States
| | - Martin Head-Gordon
- Department of Chemistry, University of California, Berkeley, California 94720, United States
- Chemical Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720, United States
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9
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Yeh CN, Morales MA. Low-Scaling Algorithm for the Random Phase Approximation Using Tensor Hypercontraction with k-point Sampling. J Chem Theory Comput 2023; 19:6197-6207. [PMID: 37624575 DOI: 10.1021/acs.jctc.3c00615] [Citation(s) in RCA: 4] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 08/26/2023]
Abstract
We present a low-scaling algorithm for the random phase approximation (RPA) with k-point sampling in the framework of tensor hypercontraction (THC) for electron repulsion integrals (ERIs). The THC factorization is obtained via a revised interpolative separable density fitting (ISDF) procedure with a momentum-dependent auxiliary basis for generic single-particle Bloch orbitals. Our formulation does not require preoptimized interpolating points or auxiliary bases, and the accuracy is systematically controlled by the number of interpolating points. The resulting RPA algorithm scales linearly with the number of k-points and cubically with the system size without any assumption on sparsity or locality of orbitals. The errors of ERIs and RPA energy show rapid convergence with respect to the size of the THC auxiliary basis, suggesting a promising and robust direction to construct efficient algorithms of higher order many-body perturbation theories for large-scale systems.
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Affiliation(s)
- Chia-Nan Yeh
- Center for Computational Quantum Physics, Flatiron Institute, New York, New York 10010, United States
| | - Miguel A Morales
- Center for Computational Quantum Physics, Flatiron Institute, New York, New York 10010, United States
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10
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Rettig A, Lee J, Head-Gordon M. Even Faster Exact Exchange for Solids via Tensor Hypercontraction. J Chem Theory Comput 2023; 19:5773-5784. [PMID: 37586065 DOI: 10.1021/acs.jctc.3c00407] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 08/18/2023]
Abstract
Hybrid density functional theory (DFT) remains intractable for large periodic systems due to the demanding computational cost of exact exchange. We apply the tensor hypercontraction (THC) (or interpolative separable density fitting) approximation to periodic hybrid DFT calculations with Gaussian-type orbitals using the Gaussian plane wave approach. This is done to lower the computational scaling with respect to the number of basis functions (N) and k-points (Nk) at a fixed system size. Additionally, we propose an algorithm to fit only occupied orbital products via THC (i.e., a set of points, NISDF) to further reduce computation time and memory usage. This algorithm has linear scaling cost with k-points, no explicit dependence of NISDF on basis set size, and overall cubic scaling with unit cell size. Significant speedups and reduced memory usage may be obtained for moderately sized k-point meshes, with additional gains for large k-point meshes. Adequate accuracy can be obtained using THC-oo-K for self-consistent calculations. We perform illustrative hybrid density function theory calculations on the benzene crystal in the basis set and thermodynamic limits to highlight the utility of this algorithm.
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Affiliation(s)
- Adam Rettig
- Department of Chemistry, University of California, Berkeley, California 94720, United States
- Chemical Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720, United States
| | - Joonho Lee
- Department of Chemistry, Columbia University, New York, New York 10027, United States
| | - Martin Head-Gordon
- Department of Chemistry, University of California, Berkeley, California 94720, United States
- Chemical Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720, United States
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11
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Qin X, Hu W, Yang J. Interpolative Separable Density Fitting for Accelerating Two-Electron Integrals: A Theoretical Perspective. J Chem Theory Comput 2023; 19:679-693. [PMID: 36693136 DOI: 10.1021/acs.jctc.2c00927] [Citation(s) in RCA: 5] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/25/2023]
Abstract
Low-rank approximations have long been considered an efficient way to accelerate electronic structure calculations associated with the evaluation of electron repulsion integrals (ERIs). As an accurate and efficient algorithm for compressing the ERI tensor, the interpolative separable density fitting (ISDF) decomposition has recently attracted great attention in this context. In this perspective, we introduce the ISDF decomposition from the theoretical aspects and technique details. The ISDF decomposition can construct a fully separable low-rank approximation (tensor hypercontraction factorization) of ERIs in real space with a cubic cost, offering great flexibility for accelerating high-scaling electronic structure calculations. We review the typical applications of ISDF in hybrid functionals, time-dependent density functional theory, and GW approximation. Finally, we discuss the promising directions for future development of ISDF.
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Affiliation(s)
- Xinming Qin
- Hefei National Research Center for Physical Sciences at the Microscale, Department of Chemical Physics, Synergetic Innovation Center of Quantum Information and Quantum Physics, and Anhui Center for Applied Mathematics, University of Science and Technology of China, Hefei, Anhui230026, China
| | - Wei Hu
- Hefei National Research Center for Physical Sciences at the Microscale, Department of Chemical Physics, Synergetic Innovation Center of Quantum Information and Quantum Physics, and Anhui Center for Applied Mathematics, University of Science and Technology of China, Hefei, Anhui230026, China
| | - Jinlong Yang
- Hefei National Research Center for Physical Sciences at the Microscale, Department of Chemical Physics, Synergetic Innovation Center of Quantum Information and Quantum Physics, and Anhui Center for Applied Mathematics, University of Science and Technology of China, Hefei, Anhui230026, China
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12
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Wang Z, Aldossary A, Head-Gordon M. Sparsity of the electron repulsion integral tensor using different localized virtual orbital representations in local second-order Møller-Plesset theory. J Chem Phys 2023; 158:064105. [PMID: 36792513 DOI: 10.1063/5.0134764] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/20/2023] Open
Abstract
Utilizing localized orbitals, local correlation theory can reduce the unphysically high system-size scaling of post-Hartree-Fock (post-HF) methods to linear scaling in insulating molecules. The sparsity of the four-index electron repulsion integral (ERI) tensor is central to achieving this reduction. For second-order Møller-Plesset theory (MP2), one of the simplest post-HF methods, only the (ia|jb) ERIs are needed, coupling occupied orbitals i, j and virtuals a, b. In this paper, we compare the numerical sparsity (called the "ragged list") and two other approaches revealing the low-rank sparsity of the ERI. The ragged list requires only one set of (localized) virtual orbitals, and we find that the orthogonal valence virtual-hard virtual set of virtuals originally proposed by Subotnik et al. gives the sparsest ERI tensor. To further compress the ERI tensor, the pair natural orbital (PNO) type representation uses different sets of virtual orbitals for different occupied orbital pairs, while the occupied-specific virtual (OSV) approach uses different virtuals for each occupied orbital. Our results indicate that while the low-rank PNO representation achieves significant rank reduction, it also requires more memory than the ragged list. The OSV approach requires similar memory to that of the ragged list, but it involves greater algorithmic complexity. An approximation (called the "fixed sparsity pattern") for solving the local MP2 equations using the numerically sparse ERI tensor is proposed and tested to be sufficiently accurate and to have highly controllable error. A low-scaling local MP2 algorithm based on the ragged list and the fixed sparsity pattern is therefore promising.
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Affiliation(s)
- Zhenling Wang
- Pitzer Center for Theoretical Chemistry, Department of Chemistry, University of California, Berkeley, California 94720, USA
| | - Abdulrahman Aldossary
- Pitzer Center for Theoretical Chemistry, Department of Chemistry, University of California, Berkeley, California 94720, USA
| | - Martin Head-Gordon
- Pitzer Center for Theoretical Chemistry, Department of Chemistry, University of California, Berkeley, California 94720, USA
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13
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Pierce K, Valeev EF. Efficient Construction of Canonical Polyadic Approximations of Tensor Networks. J Chem Theory Comput 2023; 19:71-81. [PMID: 36484711 DOI: 10.1021/acs.jctc.2c00861] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
Abstract
We consider the problem of constructing a canonical polyadic (CP) decomposition for a tensor network, rather than a single tensor. We illustrate how it is possible to reduce the complexity of constructing an approximate CP representation of the network by leveraging its structure in the course of the CP factor optimization. The utility of this technique is demonstrated for the order-4 Coulomb interaction tensor approximated by two order-3 tensors via an approximate generalized square-root (SQ) factorization, such as density fitting or (pivoted) Cholesky. The complexity of constructing a four-way CP decomposition is reduced from O(n4RCP) (for the nonapproximated Coulomb tensor) to O(n3RCP) (for the SQ-factorized Coulomb tensor), where n and RCP are the basis and CP ranks, respectively. This reduces the cost of constructing the CP approximation of two-body interaction tensors of relevance to accurate many-body electronic structure by up to 2 orders of magnitude for systems with up to 36 atoms studied here. The full four-way CP approximation of the Coulomb interaction tensor is shown to be more accurate than the known approaches which utilize CP-factorizations of the SQ factors (which are also constructed with an O(n3RCP) cost), such as the algebraic pseudospectral and tensor hypercontraction approaches. The CP-decomposed SQ factors can also serve as a robust initial guess for the four-way CP factors.
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Affiliation(s)
- Karl Pierce
- Department of Chemistry, Virginia Tech, Blacksburg, Virginia24061, United States
| | - Edward F Valeev
- Department of Chemistry, Virginia Tech, Blacksburg, Virginia24061, United States
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14
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Sharma S, White AF, Beylkin G. Fast Exchange with Gaussian Basis Set Using Robust Pseudospectral Method. J Chem Theory Comput 2022; 18:7306-7320. [PMID: 36417710 DOI: 10.1021/acs.jctc.2c00720] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
Abstract
In this article, we present an algorithm to efficiently evaluate the exchange matrix in periodic systems when a Gaussian basis set with pseudopotentials is used. The usual algorithm for evaluating exchange matrix scales cubically with the system size because one has to perform O(N2) fast Fourier transform (FFT). Here, we introduce an algorithm that retains the cubic scaling but reduces the prefactor significantly by eliminating the need to do FFTs during each exchange build. This is accomplished by representing the products of Gaussian basis function using a linear combination of an auxiliary basis the number of which scales linearly with the size of the system. We store the potential due to these auxiliary functions in memory, which allows us to obtain the exchange matrix without the need to do FFT, albeit at the cost of additional memory requirement. Although the basic idea of using auxiliary functions is not new, our algorithm is cheaper due to a combination of three ingredients: (a) we use a robust pseudospectral method that allows us to use a relatively small number of auxiliary basis to obtain high accuracy; (b) we use occ-RI exchange, which eliminates the need to construct the full exchange matrix; and (c) we use the (interpolative separable density fitting) ISDF algorithm to construct these auxiliary basis sets that are used in the robust pseudospectral method. The resulting algorithm is accurate, and we note that the error in the final energy decreases exponentially rapidly with the number of auxiliary functions.
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Affiliation(s)
- Sandeep Sharma
- Department of Chemistry, University of Colorado Boulder, Boulder, Colorado80309, United States
| | - Alec F White
- Quantum Simulation Technologies, Inc., Boston, Massachusetts02135, United States
| | - Gregory Beylkin
- Department of Applied Mathematics, University of Colorado, Boulder, Colorado80309, United States
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15
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Lee J, Rettig A, Feng X, Epifanovsky E, Head-Gordon M. Faster Exact Exchange for Solids via occ-RI-K: Application to Combinatorially Optimized Range-Separated Hybrid Functionals for Simple Solids with Pseudopotentials Near the Basis Set Limit. J Chem Theory Comput 2022; 18:7336-7349. [PMID: 36459992 PMCID: PMC10441520 DOI: 10.1021/acs.jctc.2c00742] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/04/2022]
Abstract
In this work, we developed and showcased the occ-RI-K algorithm to compute the exact exchange contribution in density functional calculations of solids near the basis set limit. Within the Gaussian planewave (GPW) density fitting, our algorithm achieves a 1-2 orders of magnitude speedup compared to conventional GPW algorithms. Since our algorithm is well suited for simulations with large basis sets, we applied it to 12 hybrid density functionals with pseudopotentials and a large uncontracted basis set to assess their performance on band gaps of 25 simple solids near the basis set limit. The largest calculation performed in this work involves 16 electrons and 350 basis functions in the unit cell utilizing a 6 × 6 × 6 k-mesh. With 20-27% exact exchange, global hybrid functionals (B3LYP, PBE0, revPBE0, B97-3, SCAN0) perform similarly with a root-mean-square deviation (RMSD) of 0.61-0.77 eV, while other global hybrid functionals such as M06-2X (2.02 eV) and MN15 (1.05 eV) show higher RMSD due to their increased fraction of exact exchange. A short-range hybrid functional, HSE achieves a similar RMSD (0.76 eV) but shows a notable underestimation of band gaps due to the complete lack of long-range exchange. We found that two combinatorially optimized range-separated hybrid functionals, ωB97X-rV (3.94 eV) and ωB97M-rV (3.40 eV), and the two other range-separated hybrid functionals, CAM-B3LYP (2.41 eV) and CAM-QTP01 (4.16 eV), significantly overestimate the band gap because of their high fraction of long-range exact exchange. Given the failure of ωB97X-rV and ωB97M-rV, we have yet to find a density functional that offers consistent performance for both molecules and solids. Our algorithm development and density functional assessment will serve as a stepping stone toward developing more accurate hybrid functionals and applying them to practical applications.
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Affiliation(s)
- Joonho Lee
- Department of Chemistry, Columbia University, New York, NY, USA
| | - Adam Rettig
- Department of Chemistry, University of California, Berkeley, CA, USA
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16
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Lesiuk M. When Gold Is Not Enough: Platinum Standard of Quantum Chemistry with N7 Cost. J Chem Theory Comput 2022; 18:6537-6556. [PMID: 36314739 PMCID: PMC9648181 DOI: 10.1021/acs.jctc.2c00460] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
Abstract
![]()
In this paper, we extend the rank-reduced coupled-cluster
formalism
to the calculation of non-iterative energy corrections due to quadruple
excitations. There are two major components of the proposed formalism.
The first is an approximate compression of the quadruple excitation
amplitudes using the Tucker format. The second is a modified functional
used for the evaluation of the corrections which gives exactly the
same results for the exact amplitudes, but is less susceptible to
errors resulting from the aforementioned compression. We show, both
theoretically and numerically, that the computational cost of the
proposed method scales as the seventh power of the system size. Using
reference results for a set of small molecules, the method is calibrated
to deliver relative accuracy of a few percent in energy corrections.
To illustrate the potential of the theory, we calculate the isomerization
energy of ortho/meta benzyne (C6H4) and the barrier height for the Cope rearrangement
in bullvalene (C10H10). The method retains a
near-black-box nature of the conventional coupled-cluster formalism
and depends on only one additional parameter that controls the accuracy.
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Affiliation(s)
- Michał Lesiuk
- Faculty of Chemistry, University of Warsaw, Pasteura 1, Warsaw 02-093, Poland
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17
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Reliably assessing the electronic structure of cytochrome P450 on today's classical computers and tomorrow's quantum computers. Proc Natl Acad Sci U S A 2022; 119:e2203533119. [PMID: 36095200 PMCID: PMC9499570 DOI: 10.1073/pnas.2203533119] [Citation(s) in RCA: 11] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022] Open
Abstract
Chemical simulation is one of the most promising applications for future quantum computers. It is thought that quantum computers may enable accurate simulation for complex molecules that are otherwise impossible to simulate classically; that is, it displays quantum advantage. To better understand quantum advantage in chemical simulation, we explore what quantum and classical resources are required to simulate a series of pharmaceutically relevant molecules. Using classical methods, we show that reliable classical simulation of these molecules requires significant resources and therefore is a promising candidate for quantum simulation. We estimate the quantum resources, both in overall simulation time and the size. The insights from this study pave the way for future quantum simulation of complex molecules. An accurate assessment of how quantum computers can be used for chemical simulation, especially their potential computational advantages, provides important context on how to deploy these future devices. To perform this assessment reliably, quantum resource estimates must be coupled with classical computations attempting to answer relevant chemical questions and to define the classical algorithms simulation frontier. Herein, we explore the quantum computation and classical computation resources required to assess the electronic structure of cytochrome P450 enzymes (CYPs) and thus define a classical–quantum advantage boundary. This is accomplished by analyzing the convergence of density matrix renormalization group plus n-electron valence state perturbation theory (DMRG+NEVPT2) and coupled-cluster singles doubles with noniterative triples [CCSD(T)] calculations for spin gaps in models of the CYP catalytic cycle that indicate multireference character. The quantum resources required to perform phase estimation using qubitized quantum walks are calculated for the same systems. Compilation into the surface code provides runtime estimates to compare directly to DMRG runtimes and to evaluate potential quantum advantage. Both classical and quantum resource estimates suggest that simulation of CYP models at scales large enough to balance dynamic and multiconfigurational electron correlation has the potential to be a quantum advantage problem and emphasizes the important interplay between classical computations and quantum algorithms development for chemical simulation.
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18
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Bangerter F, Glasbrenner M, Ochsenfeld C. Tensor-Hypercontracted MP2 First Derivatives: Runtime and Memory Efficient Computation of Hyperfine Coupling Constants. J Chem Theory Comput 2022; 18:5233-5245. [PMID: 35943450 PMCID: PMC9476664 DOI: 10.1021/acs.jctc.2c00118] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/05/2023]
Abstract
We employ our recently introduced tensor-hypercontracted (THC) second-order Møller-Plesset perturbation theory (MP2) method [Bangerter, F. H., Glasbrenner, M., Ochsenfeld, C. J. Chem. Theory Comput. 2021, 17, 211-221] for the computation of hyperfine coupling constants (HFCCs). The implementation leverages the tensor structure of the THC factorized electron repulsion integrals for an efficient formation of the integral-based intermediates. The computational complexity of the most expensive and formally quintic scaling exchange-like contribution is reduced to effectively subquadratic, by making use of the intrinsic, exponentially decaying coupling between tensor indices through screening based on natural blocking. Overall, this yields an effective subquadratic scaling with a low prefactor for the presented THC-based AO-MP2 method for the computation of isotropic HFCCs on DNA fragments with up to 500 atoms and 5000 basis functions. Furthermore, the implementation achieves considerable speedups with up to a factor of roughly 600-1000 compared to previous implementations [Vogler, S., Ludwig, M., Maurer, M., Ochsenfeld, C. J. Chem. Phys. 2017, 147, 024101] for medium-sized organic radicals, while also significantly reducing storage requirements.
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Affiliation(s)
- Felix
H. Bangerter
- Chair
of Theoretical Chemistry, Department of Chemistry, University of Munich (LMU), D-81377 Munich, Germany
| | - Michael Glasbrenner
- Chair
of Theoretical Chemistry, Department of Chemistry, University of Munich (LMU), D-81377 Munich, Germany
| | - Christian Ochsenfeld
- Chair
of Theoretical Chemistry, Department of Chemistry, University of Munich (LMU), D-81377 Munich, Germany,Max
Planck Institute for Solid State Research, D-70569 Stuttgart, Germany,
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19
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Hohenstein EG, Fales BS, Parrish RM, Martínez TJ. Rank-reduced coupled-cluster. III. Tensor hypercontraction of the doubles amplitudes. J Chem Phys 2022; 156:054102. [DOI: 10.1063/5.0077770] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Affiliation(s)
- Edward G. Hohenstein
- Department of Chemistry and The PULSE Institute, Stanford University, Stanford, California 94305, USA
- SLAC National Accelerator Laboratory, 2575 Sand Hill Road, Menlo Park, California 94025, USA
| | - B. Scott Fales
- Department of Chemistry and The PULSE Institute, Stanford University, Stanford, California 94305, USA
- SLAC National Accelerator Laboratory, 2575 Sand Hill Road, Menlo Park, California 94025, USA
| | | | - Todd J. Martínez
- Department of Chemistry and The PULSE Institute, Stanford University, Stanford, California 94305, USA
- SLAC National Accelerator Laboratory, 2575 Sand Hill Road, Menlo Park, California 94025, USA
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20
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Lesiuk M. Quintic-scaling rank-reduced coupled cluster theory with single and double excitations. J Chem Phys 2022; 156:064103. [DOI: 10.1063/5.0071916] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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21
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Lesiuk M. Near-Exact CCSDT Energetics from Rank-Reduced Formalism Supplemented by Non-iterative Corrections. J Chem Theory Comput 2021; 17:7632-7647. [PMID: 34860018 DOI: 10.1021/acs.jctc.1c00933] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
We introduce a non-iterative energy correction, added on top of the rank-reduced coupled-cluster method with single, double, and triple substitutions, that accounts for excitations excluded from the parent triple excitation subspace. The formula for the correction is derived by employing the coupled-cluster Lagrangian formalism, with an additional assumption that the parent excitation subspace is closed under the action of the Fock operator. Owing to the rank-reduced form of the triple excitation amplitudes tensor, the computational cost of evaluating the correction scales as N7, where N is the system size. The accuracy and computational efficiency of the proposed method is assessed for both total and relative correlation energies. We show that the non-iterative correction can fulfill two separate roles. If the accuracy level of a fraction of kJ/mol is sufficient for a given system, the correction significantly reduces the dimension of the parent triple excitation subspace needed in the iterative part of the calculations. Simultaneously, it enables reproducing the exact CCSDT results to an accuracy level below 0.1 kJ/mol, with a larger, yet still reasonable, dimension of the parent excitation subspace. This typically can be achieved at a computational cost only several times larger than required for the CCSD(T) method. The proposed method retains the black-box features of the single-reference coupled-cluster theory; the dimension of the parent excitation subspace remains the only additional parameter that has to be specified.
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Affiliation(s)
- Michał Lesiuk
- Faculty of Chemistry, University of Warsaw, Pasteura 1, 02-093 Warsaw, Poland
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22
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Santra G, Semidalas E, Martin JML. Surprisingly Good Performance of XYG3 Family Functionals Using a Scaled KS-MP3 Correlation. J Phys Chem Lett 2021; 12:9368-9376. [PMID: 34550706 DOI: 10.1021/acs.jpclett.1c02838] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/16/2023]
Abstract
By adding a GLPT3 (third-order Görling-Levy perturbation theory, or KS-MP3) term E3 to the XYG7 form for a double hybrid, we are able to bring down WTMAD2 (weighted total mean absolute deviation) for the very large and chemically diverse GMTKN55 benchmark to an unprecedented 1.17 kcal/mol, competitive with much costlier composite wave function ab initio approaches. Intriguingly, (a) the introduction of E3 makes an empirical dispersion correction redundant; (b) generalized gradient approximation (GGA) or meta-GGA semilocal correlation functionals offer no advantage over the local density approximation (LDA) in this framework; (c) if a dispersion correction is retained, then simple Slater exchange leads to no significant loss in accuracy. It is possible to create a six-parameter functional with WTMAD2 = 1.42 that has no post-LDA density functional theory components and no dispersion correction in the final energy.
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Affiliation(s)
- Golokesh Santra
- Department of Molecular Chemistry and Materials Science, Weizmann Institute of Science, 7610001 Reḥovot, Israel
| | - Emmanouil Semidalas
- Department of Molecular Chemistry and Materials Science, Weizmann Institute of Science, 7610001 Reḥovot, Israel
| | - Jan M L Martin
- Department of Molecular Chemistry and Materials Science, Weizmann Institute of Science, 7610001 Reḥovot, Israel
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23
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Loipersberger M, Bertels LW, Lee J, Head-Gordon M. Exploring the Limits of Second- and Third-Order Møller-Plesset Perturbation Theories for Noncovalent Interactions: Revisiting MP2.5 and Assessing the Importance of Regularization and Reference Orbitals. J Chem Theory Comput 2021; 17:5582-5599. [PMID: 34382394 PMCID: PMC9948597 DOI: 10.1021/acs.jctc.1c00469] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/04/2023]
Abstract
This work systematically assesses the influence of reference orbitals, regularization, and scaling on the performance of second- and third-order Møller-Plesset perturbation theory wave function methods for noncovalent interactions (NCIs). Testing on 19 data sets (A24, DS14, HB15, HSG, S22, X40, HW30, NC15, S66, AlkBind12, CO2Nitrogen16, HB49, Ionic43, TA13, XB18, Bauza30, CT20, XB51, and Orel26rad) covers a wide range of different NCIs including hydrogen bonding, dispersion, and halogen bonding. Inclusion of potential energy surfaces from different hydrogen bonds and dispersion-bound complexes gauges accuracy for nonequilibrium geometries. Fifteen methods are tested. In notation where nonstandard choices of orbitals are denoted as methods:orbitals, these are MP2, κ-MP2, SCS-MP2, OOMP2, κ-OOMP2, MP3, MP2.5, MP3:OOMP2, MP2.5:OOMP2, MP3:κ-OOMP2, MP2.5:κ-OOMP2, κ-MP3:κ-OOMP2, κ-MP2.5:κ-OOMP2, MP3:ωB97X-V, and MP2.5:ωB97X-V. Furthermore, we compare these methods to the ωB97M-V and B3LYP-D3 density functionals, as well as CCSD. We find that the κ-regularization (κ = 1.45 au was used throughout) improves the energetics in almost all data sets for both MP2 (in 17 out of 19 data sets) and OOMP2 (16 out of 19). The improvement is significant (e.g., the root-mean-square deviation (RMSD) for the S66 data set is 0.29 kcal/mol for κ-OOMP2 versus 0.67 kcal/mol for MP2) and for interactions between stable closed-shell molecules, not strongly dependent on the reference orbitals. Scaled MP3 (with a factor of 0.5) using κ-OOMP2 reference orbitals (MP2.5:κ-OOMP2) provides significantly more accurate results for NCIs across all data sets with noniterative O(N6) scaling (S66 data set RMSD: 0.10 kcal/mol). Across the entire data set of 356 points, the improvement over standard MP2.5 is approximately a factor of 2: RMSD for MP3:κ-OOMP2 is 0.25 vs 0.50 kcal/mol for MP2.5. The use of high-quality density functional reference orbitals (ωB97X-V) also significantly improves the results of MP2.5 for NCI over a Hartree-Fock orbital reference. All our assessments and conclusions are based on the use of the medium-sized aug-cc-pVTZ basis to yield results that are directly compared against complete basis set limit reference values.
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Affiliation(s)
| | - Luke W. Bertels
- Department of Chemistry, University of California, Berkeley, California 94720, USA,Present Address: Department of Chemistry, Virginia Tech, Blacksburg, VA 24061, USA
| | - Joonho Lee
- Department of Chemistry, University of California, Berkeley, California 94720, USA,Present Address: Department of Chemistry, Columbia University, NY
| | - Martin Head-Gordon
- Department of Chemistry, University of California, Berkeley, California 94720, USA,Chemical Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720, USA
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24
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Ma H, Wang L, Wan L, Li J, Qin X, Liu J, Hu W, Lin L, Yang C, Yang J. Realizing Effective Cubic-Scaling Coulomb Hole Plus Screened Exchange Approximation in Periodic Systems via Interpolative Separable Density Fitting with a Plane-Wave Basis Set. J Phys Chem A 2021; 125:7545-7557. [PMID: 34428038 DOI: 10.1021/acs.jpca.1c03762] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
The GW approximation is an effective way to accurately describe the single-electron excitations of molecules and the quasiparticle energies of solids. However, a perceived drawback of the GW calculations is their high computational cost and large memory usage, which limit their applications to large systems. Herein, we demonstrate an accurate and effective low-rank approximation to accelerate non-self-consistent GW (G0W0) calculations under the static Coulomb hole plus screened exchange (COHSEX) approximation for periodic systems. Our approach is to adopt the interpolative separable density fitting (ISDF) decomposition and Cauchy's integral to construct low-rank representations of the dielectric matrix ϵ and self-energy matrix Σ. This approach reduces the number of floating point operations from O(Ne4) to O(Ne3) and requires a much smaller memory footprint. Two methods are used to select the interpolation points in ISDF, including the standard QR factorization with column pivoting (QRCP) procedure and the machine learning K-means clustering (K-means) algorithm. We demonstrate that these two methods can yield similar accuracy for both molecules and solids at much lower computational cost. In particular, K-means clustering can significantly reduce the computational cost of selecting the interpolation points by an order of magnitude compared to QRCP, resulting in an overall speedup factor of about ten times ISDF accelerated the static COHSEX calculations compared with conventional COHSEX approximation.
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Affiliation(s)
- Huanhuan Ma
- Hefei National Laboratory for Physical Sciences at the Microscale, Department of Chemical Physics, Synergetic Innovation Center of Quantum Information and Quantum Physics, and Anhui Center for Applied Mathematics, University of Science and Technology of China, Hefei, Anhui 230026, China
| | - Lei Wang
- Hefei National Laboratory for Physical Sciences at the Microscale, Department of Chemical Physics, Synergetic Innovation Center of Quantum Information and Quantum Physics, and Anhui Center for Applied Mathematics, University of Science and Technology of China, Hefei, Anhui 230026, China
| | - Lingyun Wan
- Hefei National Laboratory for Physical Sciences at the Microscale, Department of Chemical Physics, Synergetic Innovation Center of Quantum Information and Quantum Physics, and Anhui Center for Applied Mathematics, University of Science and Technology of China, Hefei, Anhui 230026, China
| | - Jielan Li
- Hefei National Laboratory for Physical Sciences at the Microscale, Department of Chemical Physics, Synergetic Innovation Center of Quantum Information and Quantum Physics, and Anhui Center for Applied Mathematics, University of Science and Technology of China, Hefei, Anhui 230026, China
| | - Xinming Qin
- Hefei National Laboratory for Physical Sciences at the Microscale, Department of Chemical Physics, Synergetic Innovation Center of Quantum Information and Quantum Physics, and Anhui Center for Applied Mathematics, University of Science and Technology of China, Hefei, Anhui 230026, China
| | - Jie Liu
- Hefei National Laboratory for Physical Sciences at the Microscale, Department of Chemical Physics, Synergetic Innovation Center of Quantum Information and Quantum Physics, and Anhui Center for Applied Mathematics, University of Science and Technology of China, Hefei, Anhui 230026, China
| | - Wei Hu
- Hefei National Laboratory for Physical Sciences at the Microscale, Department of Chemical Physics, Synergetic Innovation Center of Quantum Information and Quantum Physics, and Anhui Center for Applied Mathematics, University of Science and Technology of China, Hefei, Anhui 230026, China.,Computational Research Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720, United States
| | - Lin Lin
- Computational Research Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720, United States.,Department of Mathematics, University of California, Berkeley, California 94720, United States
| | - Chao Yang
- Computational Research Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720, United States
| | - Jinlong Yang
- Hefei National Laboratory for Physical Sciences at the Microscale, Department of Chemical Physics, Synergetic Innovation Center of Quantum Information and Quantum Physics, and Anhui Center for Applied Mathematics, University of Science and Technology of China, Hefei, Anhui 230026, China
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25
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Santra G, Semidalas E, Martin JML. Exploring Avenues beyond Revised DSD Functionals: II. Random-Phase Approximation and Scaled MP3 Corrections. J Phys Chem A 2021; 125:4628-4638. [PMID: 34019413 PMCID: PMC8279643 DOI: 10.1021/acs.jpca.1c01295] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
Abstract
![]()
For revDSD double
hybrids, the Görling–Levy second-order
perturbation theory component is an Achilles’ heel when applied
to systems with significant near-degeneracy (“static”)
correlation. We have explored its replacement by the direct random
phase approximation (dRPA), inspired by the SCS-dRPA75 functional
of Kállay and co-workers. The addition to the final energy
of both a D4 empirical dispersion correction and of a semilocal correlation
component lead to significant improvements, with DSD-PBEdRPA75-D4 approaching the performance of revDSD-PBEP86-D4 and the Berkeley
ωB97M(2). This form appears to be fairly insensitive to the
choice of the semilocal functional but does exhibit stronger basis
set sensitivity than the PT2-based double hybrids (due to much larger
prefactors for the nonlocal correlation). As an alternative, we explored
adding an MP3-like correction term (in a medium-sized basis set) to
a range-separated ωDSD-PBEP86-D4 double hybrid and found it
to have significantly lower WTMAD2 (weighted mean absolute deviation)
for the large and chemically diverse GMTKN55 benchmark suite; the
added computational cost can be mitigated through density fitting
techniques.
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Affiliation(s)
- Golokesh Santra
- Department of Organic Chemistry, Weizmann Institute of Science, 7610001 Reḥovot, Israel
| | - Emmanouil Semidalas
- Department of Organic Chemistry, Weizmann Institute of Science, 7610001 Reḥovot, Israel
| | - Jan M L Martin
- Department of Organic Chemistry, Weizmann Institute of Science, 7610001 Reḥovot, Israel
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26
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Lee J, Malone FD, Morales MA, Reichman DR. Spectral Functions from Auxiliary-Field Quantum Monte Carlo without Analytic Continuation: The Extended Koopmans' Theorem Approach. J Chem Theory Comput 2021; 17:3372-3387. [PMID: 33983735 DOI: 10.1021/acs.jctc.1c00100] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/22/2023]
Abstract
We explore the extended Koopmans' theorem (EKT) within the phaseless auxiliary-field quantum Monte Carlo (AFQMC) method. The EKT allows for the direct calculation of electron addition and removal spectral functions using reduced density matrices of the N-particle system and avoids the need for analytic continuation. The lowest level of EKT with AFQMC, called EKT1-AFQMC, is benchmarked using atoms, small molecules, 14-electron and 54-electron uniform electron gas supercells, and a minimal unit cell model of diamond at the Γ-point. Via comparison with numerically exact results (when possible) and coupled-cluster methods, we find that EKT1-AFQMC can reproduce the qualitative features of spectral functions for Koopmans-like charge excitations with errors in peak locations of less than 0.25 eV in a finite basis. We also note the numerical difficulties that arise in the EKT1-AFQMC eigenvalue problem, especially when back-propagated quantities are very noisy. We show how a systematic higher-order EKT approach can correct errors in EKT1-based theories with respect to the satellite region of the spectral function. Our work will be of use for the study of low-energy charge excitations and spectral functions in correlated molecules and solids where AFQMC can be reliably performed for both energy and back propagation.
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Affiliation(s)
- Joonho Lee
- Department of Chemistry, Columbia University, New York, New York 10027, United States
| | - Fionn D Malone
- Quantum Simulations Group, Lawrence Livermore National Laboratory, 7000 East Avenue, Livermore, California 94551, United States
| | - Miguel A Morales
- Quantum Simulations Group, Lawrence Livermore National Laboratory, 7000 East Avenue, Livermore, California 94551, United States
| | - David R Reichman
- Department of Chemistry, Columbia University, New York, New York 10027, United States
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27
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Duchemin I, Blase X. Cubic-Scaling All-Electron GW Calculations with a Separable Density-Fitting Space-Time Approach. J Chem Theory Comput 2021; 17:2383-2393. [PMID: 33797245 DOI: 10.1021/acs.jctc.1c00101] [Citation(s) in RCA: 45] [Impact Index Per Article: 15.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
We present an implementation of the GW space-time approach that allows cubic-scaling all-electron calculations with standard Gaussian basis sets without exploiting any localization or sparsity considerations. The independent-electron susceptibility is constructed in a time representation over a nonuniform distribution of real-space locations {rk} optimized within a separable resolution-of-the-identity framework to reproduce standard Coulomb-fitting calculations with meV accuracy. The compactness of the obtained {rk} distribution leads to a crossover with the standard Coulomb-fitting scheme for system sizes below a few hundred electrons. The needed analytic continuation follows a recent approach that requires the continuation of the screened Coulomb potential rather than the much more structured self-energy. The present scheme is benchmarked over large molecular sets, and scaling properties are demonstrated on a family of defected hexagonal boron-nitride flakes containing up to 6000 electrons.
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Affiliation(s)
- Ivan Duchemin
- Université Grenoble Alpes, CEA, IRIG-MEM-L_Sim, 38054 Grenoble, France
| | - Xavier Blase
- Université Grenoble Alpes, CNRS, Inst NEEL, F-38042 Grenoble, France
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28
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Pierce K, Rishi V, Valeev EF. Robust Approximation of Tensor Networks: Application to Grid-Free Tensor Factorization of the Coulomb Interaction. J Chem Theory Comput 2021; 17:2217-2230. [PMID: 33780616 DOI: 10.1021/acs.jctc.0c01310] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
Approximation of a tensor network by approximating (e.g., factorizing) one or more of its constituent tensors can be improved by canceling the leading-order error due to the constituents' approximation. The utility of such robust approximation is demonstrated for robust canonical polyadic (CP) approximation of a (density-fitting) factorized two-particle Coulomb interaction tensor. The resulting algebraic (grid-free) approximation for the Coulomb tensor, closely related to the factorization appearing in pseudospectral and tensor hypercontraction approaches, is efficient and accurate, with significantly reduced rank compared to the naive (nonrobust) approximation. Application of the robust approximation to the particle-particle ladder term in the coupled-cluster singles and doubles reduces the size complexity from O (N6) to O (N5) with robustness ensuring negligible errors in chemically relevant energy differences using CP ranks approximately equal to the size of the density-fitting basis.
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Affiliation(s)
- Karl Pierce
- Department of Chemistry, Virginia Tech, Blacksburg, Virginia 24061, United States
| | - Varun Rishi
- Department of Chemistry, Virginia Tech, Blacksburg, Virginia 24061, United States
| | - Edward F Valeev
- Department of Chemistry, Virginia Tech, Blacksburg, Virginia 24061, United States
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29
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Matthews DA. A critical analysis of least-squares tensor hypercontraction applied to MP3. J Chem Phys 2021; 154:134102. [PMID: 33832252 DOI: 10.1063/5.0038764] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
The least-squares tensor hypercontraction (LS-THC) approach is a promising method of reducing the high polynomial scaling of wavefunction methods, for example, those based on many-body perturbation theory or coupled cluster. Here, we focus on LS-THC-MP3 and identify four variants with differing errors and efficiency characteristics. The performance of LS-THC-MP3 is analyzed for regular test systems with up to 40 first-row atoms. We also analyze the size-extensivity/size-consistency and grid- and basis set dependence of LS-THC-MP3. Overall, the errors observed are favorably small in comparison with standard density fitting, and a more streamlined method of generating grids via pruning is suggested. A practical crossover (the point at which LS-THC-MP3 is cheaper than the canonical method) is achieved around 240 correlated electrons. Despite several drawbacks of LS-THC that have been identified: an initial non-linearity of error when increasing system size, poor description of angular correlation, and a potentially large increase in error with the basis set size, the results show that LS-THC has significant potential for practical application to MP3 and other wavefunction methods.
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30
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Low-Scaling Tensor Hypercontraction in the Cholesky Molecular Orbital Basis Applied to Second-Order Møller-Plesset Perturbation Theory. J Chem Theory Comput 2020; 17:211-221. [PMID: 33375790 DOI: 10.1021/acs.jctc.0c00934] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
We employ various reduced scaling techniques to accelerate the recently developed least-squares tensor hypercontraction (LS-THC) approximation [Parrish, R. M., Hohenstein, E. G., Martínez, T. J., Sherrill, C. D. J. Chem. Phys. 137, 224106 (2012)] for electron repulsion integrals (ERIs) and apply it to second-order Møller-Plesset perturbation theory (MP2). The grid-projected ERI tensors are efficiently constructed using a localized Cholesky molecular orbital basis from density-fitted integrals with an attenuated Coulomb metric. Additionally, rigorous integral screening and the natural blocking matrix format are applied to reduce the complexity of this step. By recasting the equations to form the quantized representation of the 1/r operator Z into the form of a system of linear equations, the bottleneck of inverting the grid metric via pseudoinversion is removed. This leads to a reduced scaling THC algorithm and application to MP2 yields the (sub-)quadratically scaling THC-ω-RI-CDD-SOS-MP2 method. The efficiency of this method is assessed for various systems including DNA fragments with over 8000 basis functions and the subquadratic scaling is illustrated.
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31
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Qin X, Li J, Hu W, Yang J. Machine Learning K-Means Clustering Algorithm for Interpolative Separable Density Fitting to Accelerate Hybrid Functional Calculations with Numerical Atomic Orbitals. J Phys Chem A 2020; 124:10066-10074. [PMID: 33200932 DOI: 10.1021/acs.jpca.0c06019] [Citation(s) in RCA: 20] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
The interpolative separable density fitting (ISDF) is an efficient and accurate low-rank decomposition method to reduce the high computational cost and memory usage of the Hartree-Fock exchange (HFX) calculations with numerical atomic orbitals (NAOs). In this work, we present a machine learning K-means clustering algorithm to select the interpolation points in ISDF, which offers a much cheaper alternative to the expensive QR factorization with column pivoting (QRCP) procedure. We implement this K-means-based ISDF decomposition to accelerate hybrid functional calculations with NAOs in the HONPAS package. We demonstrate that this method can yield a similar accuracy for both molecules and solids at a much lower computational cost. In particular, K-means can remarkably reduce the computational cost of selecting the interpolation points by nearly two orders of magnitude compared to QRCP, resulting in a speedup of ∼10 times for ISDF-based HFX calculations.
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Affiliation(s)
- Xinming Qin
- Hefei National Laboratory for Physical Sciences at the Microscale, Department of Chemical Physics, and Synergetic Innovation Center of Quantum Information and Quantum Physics, University of Science and Technology of China, Hefei, Anhui 230026, China
| | - Jielan Li
- Hefei National Laboratory for Physical Sciences at the Microscale, Department of Chemical Physics, and Synergetic Innovation Center of Quantum Information and Quantum Physics, University of Science and Technology of China, Hefei, Anhui 230026, China
| | - Wei Hu
- Hefei National Laboratory for Physical Sciences at the Microscale, Department of Chemical Physics, and Synergetic Innovation Center of Quantum Information and Quantum Physics, University of Science and Technology of China, Hefei, Anhui 230026, China
| | - Jinlong Yang
- Hefei National Laboratory for Physical Sciences at the Microscale, Department of Chemical Physics, and Synergetic Innovation Center of Quantum Information and Quantum Physics, University of Science and Technology of China, Hefei, Anhui 230026, China
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32
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Lee J, Reichman DR. Stochastic resolution-of-the-identity auxiliary-field quantum Monte Carlo: Scaling reduction without overhead. J Chem Phys 2020; 153:044131. [DOI: 10.1063/5.0015077] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Affiliation(s)
- Joonho Lee
- Department of Chemistry, Columbia University, 3000 Broadway, New York, New York 10027, USA
| | - David R. Reichman
- Department of Chemistry, Columbia University, 3000 Broadway, New York, New York 10027, USA
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33
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Qin X, Liu J, Hu W, Yang J. Interpolative Separable Density Fitting Decomposition for Accelerating Hartree-Fock Exchange Calculations within Numerical Atomic Orbitals. J Phys Chem A 2020; 124:5664-5674. [PMID: 32538084 DOI: 10.1021/acs.jpca.0c02826] [Citation(s) in RCA: 14] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
The high cost associated with the evaluation of Hartree-Fock exchange (HFX) makes hybrid functionals computationally challenging for large systems. In this work, we present an efficient way to accelerate HFX calculations with numerical atomic basis sets. Our approach is based on the recently proposed interpolative separable density fitting (ISDF) decomposition to construct a low-rank approximation of the HFX matrix, which avoids explicit calculations of the electron repulsion integrals (ERIs) and significantly reduces the computational cost. We implement the ISDF method for hybrid functional (PBE0) calculations in the HONPAS package. We take benzene and polycyclic aromatic hydrocarbon molecules as examples and demonstrate that hybrid functionals with ISDF yield quite promising results at a significantly reduced computational cost. Especially, the ISDF approach reduces the total cost of the evaluating HFX matrix by nearly 2 orders of magnitude compared to conventional approaches of direct evaluation of ERIs.
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Affiliation(s)
- Xinming Qin
- Hefei National Laboratory for Physical Sciences at the Microscale, Department of Chemical Physics, and Synergetic Innovation Center of Quantum Information and Quantum Physics, University of Science and Technology of China, Hefei, Anhui 230026, China
| | - Jie Liu
- Hefei National Laboratory for Physical Sciences at the Microscale, Department of Chemical Physics, and Synergetic Innovation Center of Quantum Information and Quantum Physics, University of Science and Technology of China, Hefei, Anhui 230026, China
| | - Wei Hu
- Hefei National Laboratory for Physical Sciences at the Microscale, Department of Chemical Physics, and Synergetic Innovation Center of Quantum Information and Quantum Physics, University of Science and Technology of China, Hefei, Anhui 230026, China
| | - Jinlong Yang
- Hefei National Laboratory for Physical Sciences at the Microscale, Department of Chemical Physics, and Synergetic Innovation Center of Quantum Information and Quantum Physics, University of Science and Technology of China, Hefei, Anhui 230026, China
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34
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Matthews DA, Cheng L, Harding ME, Lipparini F, Stopkowicz S, Jagau TC, Szalay PG, Gauss J, Stanton JF. Coupled-cluster techniques for computational chemistry: The CFOUR program package. J Chem Phys 2020; 152:214108. [DOI: 10.1063/5.0004837] [Citation(s) in RCA: 214] [Impact Index Per Article: 53.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/30/2022] Open
Affiliation(s)
- Devin A. Matthews
- Department of Chemistry, Southern Methodist University, Dallas, Texas 75275, USA
| | - Lan Cheng
- Department of Chemistry, Johns Hopkins University, Baltimore, Maryland 21218, USA
| | - Michael E. Harding
- Institut für Physikalische Chemie, Karlsruher Institut für Technologie (KIT), Kaiserstr. 12, D-76131 Karlsruhe, Germany
| | - Filippo Lipparini
- Dipartimento di Chimica e Chimica Industriale, Università di Pisa, Via G. Moruzzi 13, I-56124 Pisa, Italy
| | - Stella Stopkowicz
- Department Chemie, Johannes Gutenberg-Universität Mainz, Duesbergweg 10-14, D-55128 Mainz, Germany
| | - Thomas-C. Jagau
- Department of Chemistry, University of Munich (LMU), Butenandtstr. 5-13, D-81377 Munich, Germany
| | - Péter G. Szalay
- ELTE Eötvös Loránd University, Institute of Chemistry, Pázmány Péter sétány 1/A, H-1117 Budapest, Hungary
| | - Jürgen Gauss
- Department Chemie, Johannes Gutenberg-Universität Mainz, Duesbergweg 10-14, D-55128 Mainz, Germany
| | - John F. Stanton
- Quantum Theory Project, Departments of Chemistry and Physics, University of Florida, Gainesville, Florida 32611, USA
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35
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Malone FD, Zhang S, Morales MA. Accelerating Auxiliary-Field Quantum Monte Carlo Simulations of Solids with Graphical Processing Units. J Chem Theory Comput 2020; 16:4286-4297. [DOI: 10.1021/acs.jctc.0c00262] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Fionn D. Malone
- Quantum Simulations Group, Lawrence Livermore National Laboratory, Livermore, California 94550, United States
| | - Shuai Zhang
- Quantum Simulations Group, Lawrence Livermore National Laboratory, Livermore, California 94550, United States
| | - Miguel A. Morales
- Quantum Simulations Group, Lawrence Livermore National Laboratory, Livermore, California 94550, United States
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36
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Kent PRC, Annaberdiyev A, Benali A, Bennett MC, Landinez Borda EJ, Doak P, Hao H, Jordan KD, Krogel JT, Kylänpää I, Lee J, Luo Y, Malone FD, Melton CA, Mitas L, Morales MA, Neuscamman E, Reboredo FA, Rubenstein B, Saritas K, Upadhyay S, Wang G, Zhang S, Zhao L. QMCPACK: Advances in the development, efficiency, and application of auxiliary field and real-space variational and diffusion quantum Monte Carlo. J Chem Phys 2020; 152:174105. [DOI: 10.1063/5.0004860] [Citation(s) in RCA: 43] [Impact Index Per Article: 10.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022] Open
Affiliation(s)
- P. R. C. Kent
- Center for Nanophase Materials Sciences Division and Computational Sciences and Engineering Division, Oak Ridge National Laboratory, Oak Ridge, Tennessee 37831, USA
| | - Abdulgani Annaberdiyev
- Department of Physics, North Carolina State University, Raleigh, North Carolina 27695-8202, USA
| | - Anouar Benali
- Computational Science Division, Argonne National Laboratory, 9700 S. Cass Avenue, Lemont, Illinois 60439, USA
| | - M. Chandler Bennett
- Materials Science and Technology Division, Oak Ridge National Laboratory, Oak Ridge, Tennessee 37831, USA
| | - Edgar Josué Landinez Borda
- Quantum Simulations Group, Lawrence Livermore National Laboratory, 7000 East Avenue, Livermore, California 94551, USA
| | - Peter Doak
- Center for Nanophase Materials Sciences Division and Computational Sciences and Engineering Division, Oak Ridge National Laboratory, Oak Ridge, Tennessee 37831, USA
| | - Hongxia Hao
- Department of Chemistry, University of California, Berkeley, California 94720, USA
| | - Kenneth D. Jordan
- Department of Chemistry, University of Pittsburgh, Pittsburgh, Pennsylvania 15260, USA
| | - Jaron T. Krogel
- Materials Science and Technology Division, Oak Ridge National Laboratory, Oak Ridge, Tennessee 37831, USA
| | - Ilkka Kylänpää
- Computational Physics Laboratory, Tampere University, P.O. Box 692, 33014 Tampere, Finland
| | - Joonho Lee
- Department of Chemistry, Columbia University, New York, New York 10027, USA
| | - Ye Luo
- Computational Science Division, Argonne National Laboratory, 9700 S. Cass Avenue, Lemont, Illinois 60439, USA
| | - Fionn D. Malone
- Quantum Simulations Group, Lawrence Livermore National Laboratory, 7000 East Avenue, Livermore, California 94551, USA
| | - Cody A. Melton
- Sandia National Laboratories, Albuquerque, New Mexico 87123, USA
| | - Lubos Mitas
- Department of Physics, North Carolina State University, Raleigh, North Carolina 27695-8202, USA
| | - Miguel A. Morales
- Quantum Simulations Group, Lawrence Livermore National Laboratory, 7000 East Avenue, Livermore, California 94551, USA
| | - Eric Neuscamman
- Department of Chemistry, University of California, Berkeley, California 94720, USA
- Chemical Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720, USA
| | - Fernando A. Reboredo
- Department of Chemistry, University of Pittsburgh, Pittsburgh, Pennsylvania 15260, USA
| | - Brenda Rubenstein
- Department of Chemistry, Brown University, Providence, Rhode Island 02912, USA
| | - Kayahan Saritas
- Department of Applied Physics, Yale University, New Haven, Connecticut 06520, USA
| | - Shiv Upadhyay
- Department of Chemistry, University of Pittsburgh, Pittsburgh, Pennsylvania 15260, USA
| | - Guangming Wang
- Department of Physics, North Carolina State University, Raleigh, North Carolina 27695-8202, USA
| | - Shuai Zhang
- Laboratory for Laser Energetics, University of Rochester, 250 E River Rd., Rochester, New York 14623, USA
| | - Luning Zhao
- Department of Chemistry, University of Washington, Seattle, Washington 98195, USA
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37
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Lee J, Malone FD, Morales MA. Utilizing Essential Symmetry Breaking in Auxiliary-Field Quantum Monte Carlo: Application to the Spin Gaps of the C36 Fullerene and an Iron Porphyrin Model Complex. J Chem Theory Comput 2020; 16:3019-3027. [DOI: 10.1021/acs.jctc.0c00055] [Citation(s) in RCA: 22] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Joonho Lee
- Department of Chemistry, Columbia University, New York, New York 10027, United States
| | - Fionn D. Malone
- Quantum Simulations Group, Lawrence Livermore National Laboratory, 7000 East Avenue, Livermore, California 94551, United States
| | - Miguel A. Morales
- Quantum Simulations Group, Lawrence Livermore National Laboratory, 7000 East Avenue, Livermore, California 94551, United States
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38
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Matthews DA. Improved Grid Optimization and Fitting in Least Squares Tensor Hypercontraction. J Chem Theory Comput 2020; 16:1382-1385. [DOI: 10.1021/acs.jctc.9b01205] [Citation(s) in RCA: 12] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Devin A. Matthews
- Department of Chemistry, Southern Methodist University, Dallas, Texas 75275, United States
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